Basic Information

Insect: Drosophila innubila
Gene Symbol: ken1
Assembly: GCA_004354385.1
Location: NW:3546042-3549395[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.061 3.4 7.9 5.9 3 23 263 283 261 283 0.96

2 12 0.00082 0.046 13.8 0.5 1 23 289 314 289 314 0.94

3 12 0.0018 0.099 12.7 1.2 1 23 321 346 321 346 0.93

4 12 0.0015 0.084 13.0 4.1 1 23 356 378 356 378 0.96

5 12 0.0017 0.096 12.8 2.2 1 23 385 407 385 407 0.97

6 12 0.0066 0.37 10.9 0.5 1 23 413 435 413 435 0.97

7 12 0.048 2.7 8.2 2.6 1 23 441 464 441 464 0.97

8 12 0.017 0.98 9.6 4.1 1 23 470 492 470 492 0.95

9 12 0.02 1.1 9.4 2.6 2 23 499 520 498 520 0.95

10 12 0.00017 0.0095 15.9 0.8 1 23 610 633 610 633 0.95

11 12 0.00034 0.019 15.0 0.8 1 23 639 661 639 661 0.95

12 12 9.1e-06 0.00051 19.9 2.3 1 23 667 689 667 689 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.061	3.4	7.9	5.9	3	23	263	283	261	283	0.96
2	12	0.00082	0.046	13.8	0.5	1	23	289	314	289	314	0.94
3	12	0.0018	0.099	12.7	1.2	1	23	321	346	321	346	0.93
4	12	0.0015	0.084	13.0	4.1	1	23	356	378	356	378	0.96
5	12	0.0017	0.096	12.8	2.2	1	23	385	407	385	407	0.97
6	12	0.0066	0.37	10.9	0.5	1	23	413	435	413	435	0.97
7	12	0.048	2.7	8.2	2.6	1	23	441	464	441	464	0.97
8	12	0.017	0.98	9.6	4.1	1	23	470	492	470	492	0.95
9	12	0.02	1.1	9.4	2.6	2	23	499	520	498	520	0.95
10	12	0.00017	0.0095	15.9	0.8	1	23	610	633	610	633	0.95
11	12	0.00034	0.019	15.0	0.8	1	23	639	661	639	661	0.95
12	12	9.1e-06	0.00051	19.9	2.3	1	23	667	689	667	689	0.98

Sequence Information

Coding Sequence: ATGAATGAGGGGAGTGAATACTCCATACACTCGATATGCCGCATTTGCTTGAATCACCTGCGCAACGATGCGGTGTACGATTTGTTTTTGGTGCCAGGATTGGCCAAGAAATTGTGTGTCTGCTCCTCTTTGTCGGTGGAGCAGCACGACGGATTCCCGAAGAACCTCTGCACCAGCTGCTACACGAAGCTGAACGATCTGCATGGCTTCCAGAAGATGTGCGTGGACTCGGTGCAAAAGTTTCAGGATATGGTGgccaataattattttactcCAGTCATATCCGATATAAATCAGATTGATAATGTGGATGTACTGAATATTGCGCCTCCGGAGGGTGAAATGGAAGAAGATCGCATTAATTTTGATCCGCTGTTGAATACGAAAATCGAGGTAATTGAGAATGAGGATGATGTGTTTAAAATGCTGGAAGATGTGGACAAGGAAGTGGAGGATGTGGACAAGGAGGGGGAATCAACATCAGAGAGTGAGGAAGATAATGATGaggatggagatggagacggagaTGGTGACTTTGAGGTGAACAGCAGTGAATCCGATGATGCAATGCCGCTGTCCAGGCTGCGAGGCTCAACCCGAGGAGCAACCAAAGCTAAGGCCAGAAAAACAACCAACAAACGCaataatgattatgatgaCAATTCCTCCAGCTCCGAAtccaatgatgatgatgatgacgacgacgaggaTGATGATAGACCCAGATCGAAGGGAAAACGCAAGAGAATACCAACTTCGGAGCGGGATCGTCATCGTTTAATTGATTGCCACATCTGTCATCAAAAGTTCAAGAAGGCCATACGCTATGAGGAGCACATGAAGCATCACAATGATCTGCTGCCATTCCAGTGCACGGTGGAGAGCTGCAAGAAGGGATTCACCACCGCTGGAGGACTGCGTCTGCACATGGATCATGCCCACATTGAGTTCTCCGAGGTGCATGCCTGCACCTTTGAGGGATGCGACAAGACATTCCCCCGCTCCGTCTTGCTCACGTTCCACATGAAGAAGGTGCACAAGGTGGCCAAGCCGGATGTCAAACGTCATGCCTGCACCGAGTGTGAGAAGGTGTTCCGCTGTCCCACTGCTTTAAAGAAGCATATGTATAAGCACACGGGAGAGGAGTTGCCCTTCGCCTGTGAGATCTGCGGCAAACGTTTCCACATACACAGCGTGCTCCGGGATCATCTGCTGCGTCATGCCGGCGTCAAGAATCATGTGTGTCCTTACTGTGGAGTGGGCAAGACCACACGACAGGAGTGGAACAAGCACATCTTGACGCACACTCGGGAAAAACAGTTCCAGTGCCGGCAATGCGATCATGCCTCCCACAACAAACAGGCGCTGTCCAATCATGTCAAGGTGGTGCACATGAAGATCAAGAACTTTGCCTGCCAGTATTGTGGCAAGACCTTTGGCAAATCCCATGCTTGTAAGATCCACGAGAGATTGCACACGGGAGAGAATTGCTGCGAGTGTAAGATCTGTGGCAAGATCTTTCTCTTCGAGAAGAGATTGACCAAGCATCTGCAGCTGCATGAGAAGCGTGATGTTCCACCAGCTTCGACAGCTGTGAAACCTCCAGATGCTCCGAACGTCAGTCaggatcagcagcagcagcagagtcATTCGACGGAGCCAGTTGATGTCAAGCCACTGCCAGTGGTGCCGCCCAAGCCCAAGAATTCGCATCGTGTGGAGCGTGTGGACATCTCTCAGCTGGCGGGCACCTCTGTGAATCCCATATCTTCTGTATCCGTTCCCTCCTGGTCACCGCAAGTCAACTTCACCAAGAAGGAGGGCCAACACATTTGTCCCGGCTGTGGACGTGGCTTCAATCACATTGGCAACATGAAACTCCACTACAAGATCATACACGAGAAGGTCAAGGATTTCGCCTGTCGCTATTGTCCCAAGCGCTTTGCCAAGGCGCAATATCTGCGTAATCACGAGTATATACATACGGGTGAGAAGCCCTTCGAGTGCAAGATCTGTGGCAAGCATTTCCGGCAGGAGCAGGTGCTAAAGACGCATCTCAAGGTGCACGACAAGCCGCCCAAGCAGCCCAAGGAGAAGAAGCCGCCAAAACCATCAGTGAGCAAAGCCCGAGGCTTAAAAGTGGAGCTCAACAAGAAACAACCAAAGATTCATGACGAATATCAGGATCCGGCGGCGGAACGAGCGGCGGCAACAGCTGCACTCCTCGCCCAACAGATCGAGGAGAACGAGGCGAAGCGGAAGCAGGAGGAGGCAAATCGCAAGATTCAGGAAGCCGCCTGTGAGCAGCTCAATAGGCTACAAAAGCAAATCCAGAGCGAAAAGGGATCCTACGACAGCTACTATGGACAGAAGACGGAAGCGGAGGGCGTTAATCCCGATGTTCTCAAATTAGATCATGTTTAA
Protein Sequence: MNEGSEYSIHSICRICLNHLRNDAVYDLFLVPGLAKKLCVCSSLSVEQHDGFPKNLCTSCYTKLNDLHGFQKMCVDSVQKFQDMVANNYFTPVISDINQIDNVDVLNIAPPEGEMEEDRINFDPLLNTKIEVIENEDDVFKMLEDVDKEVEDVDKEGESTSESEEDNDEDGDGDGDGDFEVNSSESDDAMPLSRLRGSTRGATKAKARKTTNKRNNDYDDNSSSSESNDDDDDDDEDDDRPRSKGKRKRIPTSERDRHRLIDCHICHQKFKKAIRYEEHMKHHNDLLPFQCTVESCKKGFTTAGGLRLHMDHAHIEFSEVHACTFEGCDKTFPRSVLLTFHMKKVHKVAKPDVKRHACTECEKVFRCPTALKKHMYKHTGEELPFACEICGKRFHIHSVLRDHLLRHAGVKNHVCPYCGVGKTTRQEWNKHILTHTREKQFQCRQCDHASHNKQALSNHVKVVHMKIKNFACQYCGKTFGKSHACKIHERLHTGENCCECKICGKIFLFEKRLTKHLQLHEKRDVPPASTAVKPPDAPNVSQDQQQQQSHSTEPVDVKPLPVVPPKPKNSHRVERVDISQLAGTSVNPISSVSVPSWSPQVNFTKKEGQHICPGCGRGFNHIGNMKLHYKIIHEKVKDFACRYCPKRFAKAQYLRNHEYIHTGEKPFECKICGKHFRQEQVLKTHLKVHDKPPKQPKEKKPPKPSVSKARGLKVELNKKQPKIHDEYQDPAAERAAATAALLAQQIEENEAKRKQEEANRKIQEAACEQLNRLQKQIQSEKGSYDSYYGQKTEAEGVNPDVLKLDHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00610124;
90% Identity: iTF_00608675;
80% Identity: -