Dinn002470.1
Basic Information
- Insect
- Drosophila innubila
- Gene Symbol
- ZNF131
- Assembly
- GCA_004354385.1
- Location
- NW:3034650-3036835[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.024 1.4 9.1 1.7 1 23 153 175 153 175 0.95 2 9 0.0007 0.04 14.0 2.1 1 23 181 205 181 205 0.97 3 9 9.5e-05 0.0053 16.7 4.2 1 23 212 237 212 237 0.96 4 9 0.00015 0.0085 16.1 1.1 1 23 246 268 246 268 0.97 5 9 1.5e-05 0.00086 19.2 0.9 1 23 276 300 276 300 0.95 6 9 0.0002 0.011 15.7 1.1 1 23 306 328 306 328 0.97 7 9 0.00011 0.0062 16.5 1.4 2 23 335 357 334 357 0.96 8 9 0.00048 0.027 14.5 0.8 1 23 363 385 363 385 0.97 9 9 1.5e-07 8.2e-06 25.6 0.8 1 23 391 413 391 413 0.97
Sequence Information
- Coding Sequence
- ATGATGTCAGTTTTAGATGCAGCCAAGTGTCGAGTGTGCACTTGTTCCCTAGCTGCAGCAGATGTTTGCTACGACATGCGGCAATTACCCAAATTGGCGCACAAGTTTGTCACCTGCACAAATCTAAACATTTTGGAGGAGGAGCGTCTGCCAAGTAAACTCTGCCAGGTGTGTCACGATCAGCTGGAGCTGCTTTATGCATTTCGCGGCAGGTGCATTGCAGCTGATGCGCAATGGCGCTTGGAATTGGAGGATATTAATACCCATGACAACCTGAAGATGCTGGAGGATCGGGAAACTGTTCTAGAAGCTGTCGTAGAGCTACAGGAATGCAGTTTAAACAGTGTCAGCAAGAGGCGTACAAGACAACAAAGCAAAGAGGCTAAAAGAGAGCTAGAGCAAACTGAAATCTCAACGGAGGAGCCGCATTTGTTGTCCaagtcaacaacaaccagcTACAAATGCGACATCTGCGACACGCGCTTCTTGGTGGAGCATCGTCTGCTGGCGCACAAGCGACAGCATGAGGGATTAATGCCATATCCCTGCACTGAGATTGGCTGTGATCGGGCCTTCAATCGATTGCACTGTCTGTCGGAGCACCTGAAGCAACATGCGGGCAACAGTAGCTGGTTTAGCTGCGAGCAAGAGGGCTGCCACAAGAGTTATCGCCACAAGCCCACGTTGATGATGCACATGAGAAGAAGCCACAAATTGGGACCCGAATTAAAGTCGCACGTTTGTGAATTCTGTGGCAAGGTGTTCAATTCAACGGCTGTGTTGAACGATCATCGCTATACGCACAAGGACAAGTCGGAGCTGCCACATGCCTGTCCAGAATCCGACTGCCCGCGTCGTTTCTCCAGCAAGGAGAAGCTAAAGGTGCATCTGCTGCGTCACGCGGGAATCAAGAACTTTAGCTGTCCCTATTGTGGCATGCGCAAGACCACAAGGAATGAGCTGAAGATTCACATGAACTATCATACGCTGGAGCGCACTTGGCCCTGTCGCTTCTGCTCCAAGGTGTGCAACAGTTCCGGCAATCTCAAGATGCATGTGCGCACAGTGCATGAGCGTGCCCGGGATTATGCCTGCAGCTACTGCGAGCGCAGCTTTGCCAAGCCGGATACCCGCAAATACCACGAGATGACGCACACCGGCGAGAAGCCGCACGAGTGCGAGGAATGTGGCAAGAGATTCACACAACCTGCGGCTTTACGCACTCATCGCAAGATTCACGAGAGACAACGCAAGCAAACGGATGATAAATTGGGAGTCTATACGGTTGTGATTACGCCGTCCACTGAAACAGCTGCTCTAGAGGCTGTGCCACAGCAAAGTGACTGTACAAAAGACTCAACTTGa
- Protein Sequence
- MMSVLDAAKCRVCTCSLAAADVCYDMRQLPKLAHKFVTCTNLNILEEERLPSKLCQVCHDQLELLYAFRGRCIAADAQWRLELEDINTHDNLKMLEDRETVLEAVVELQECSLNSVSKRRTRQQSKEAKRELEQTEISTEEPHLLSKSTTTSYKCDICDTRFLVEHRLLAHKRQHEGLMPYPCTEIGCDRAFNRLHCLSEHLKQHAGNSSWFSCEQEGCHKSYRHKPTLMMHMRRSHKLGPELKSHVCEFCGKVFNSTAVLNDHRYTHKDKSELPHACPESDCPRRFSSKEKLKVHLLRHAGIKNFSCPYCGMRKTTRNELKIHMNYHTLERTWPCRFCSKVCNSSGNLKMHVRTVHERARDYACSYCERSFAKPDTRKYHEMTHTGEKPHECEECGKRFTQPAALRTHRKIHERQRKQTDDKLGVYTVVITPSTETAALEAVPQQSDCTKDST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00507062;
- 90% Identity
- iTF_00507062;
- 80% Identity
- -