Basic Information

Insect: Drosophila innubila
Gene Symbol: -
Assembly: GCA_004354385.1
Location: NW:6791770-6795293[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00018 0.01 15.8 4.4 1 23 167 190 167 190 0.97

2 16 0.0011 0.065 13.3 3.1 1 23 241 264 241 264 0.96

3 16 0.00056 0.032 14.3 3.3 1 23 330 353 330 353 0.96

4 16 0.0027 0.15 12.1 0.4 2 23 405 426 404 426 0.97

5 16 2.6 1.5e+02 2.8 0.7 1 20 539 558 539 560 0.75

6 16 0.018 1 9.6 0.6 1 23 569 591 569 591 0.94

7 16 0.00025 0.014 15.4 2.1 1 23 598 620 598 621 0.95

8 16 0.00031 0.018 15.1 1.4 2 23 629 650 628 650 0.96

9 16 0.0012 0.066 13.3 0.2 3 22 678 697 676 700 0.89

10 16 0.01 0.56 10.3 0.7 1 23 737 760 737 760 0.96

11 16 0.096 5.4 7.3 1.5 1 22 767 788 767 788 0.97

12 16 0.0034 0.19 11.8 0.6 1 23 797 820 797 820 0.97

13 16 1.4e-05 0.00081 19.3 0.5 1 23 839 862 839 862 0.97

14 16 0.034 1.9 8.7 0.2 1 23 872 894 872 894 0.94

15 16 9.9e-06 0.00056 19.8 1.7 1 23 900 922 900 922 0.99

16 16 4.6e-05 0.0026 17.7 0.9 1 23 928 950 928 950 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00018	0.01	15.8	4.4	1	23	167	190	167	190	0.97
2	16	0.0011	0.065	13.3	3.1	1	23	241	264	241	264	0.96
3	16	0.00056	0.032	14.3	3.3	1	23	330	353	330	353	0.96
4	16	0.0027	0.15	12.1	0.4	2	23	405	426	404	426	0.97
5	16	2.6	1.5e+02	2.8	0.7	1	20	539	558	539	560	0.75
6	16	0.018	1	9.6	0.6	1	23	569	591	569	591	0.94
7	16	0.00025	0.014	15.4	2.1	1	23	598	620	598	621	0.95
8	16	0.00031	0.018	15.1	1.4	2	23	629	650	628	650	0.96
9	16	0.0012	0.066	13.3	0.2	3	22	678	697	676	700	0.89
10	16	0.01	0.56	10.3	0.7	1	23	737	760	737	760	0.96
11	16	0.096	5.4	7.3	1.5	1	22	767	788	767	788	0.97
12	16	0.0034	0.19	11.8	0.6	1	23	797	820	797	820	0.97
13	16	1.4e-05	0.00081	19.3	0.5	1	23	839	862	839	862	0.97
14	16	0.034	1.9	8.7	0.2	1	23	872	894	872	894	0.94
15	16	9.9e-06	0.00056	19.8	1.7	1	23	900	922	900	922	0.99
16	16	4.6e-05	0.0026	17.7	0.9	1	23	928	950	928	950	0.98

Sequence Information

Coding Sequence: ATGACAAGGACATGCAGAATCTGCGGTGGCGCAGATGGACGCTATTGGATTGAGACGCCTGTCGATAAATACGCAGAGAAAACATTCAACCAACTGCTGTTAGAACTAACCAGACTTGAGGTCGCTTTGGATCAGGCCGACAGGTTTCCGCCCTGGCTTTGTCGCAGCTGTGCTCAAAGGTTGGAAAATGCATATGATTTTGTCATGCAAGCGCGTAAAACTCATGAGCTTTGGATTCAGAAAATGGGAACAGAAGCAGCTCTGGATGATGCTGAAAAGGGCACTTTAGAATGCCTGCGAGAGACACCAATACAATTGCTGGAGATTGAGGGAGTGACAATTAAAATGGAAGAGCCATCCGAGCCAGCCATGCCCCCAGCCGACCCAGCAATTTCTGTTGATCCTTTAATTAAGAAGCATATGGATGATGCtagcgatgacgatgacgatgtgCCGCTGAAACAACGCAAAGCACAACACGCCAAATTGTCAATGCTTCACCAATGCAATAGATGCGACAAAGCCTTTAAGTATGTTACAAATCTCTTCAGGCACAAGCAGCGAGATCACAGTCCTGTTCCATGCAAGCCAAAGATCAAATCAGGAGTGGCAAATGCGGGTGCTGAGCGCTCAGTGCCGTTTCTGCACAACCTTATAAAGAGTTCGACGGTGGACCGAAGCAGCGCCAACTCCGACATGGACAATGAAGCTGACAACTACTATAAATGTGATCAATGCGACAAATCCTACAAGTACATAATGCTTCTGATTAAGCATAAGCACAAGGCTCACGGGGCCAACCAGTTGCCAGCAGAGCCAAGGCCAATTCGAGGGAGCGAATCGAGTTCAGAGCAAACATCTAATGTGAGAACAACTCAGCGTCAGCGCTTAAAAGTCCCCAGCACAGATTCTTTGGTGCATAGTTTAATCAAAGAGATAAAAACACCTGAGGAGGATGACCCAGATAACACAGGTGCCGACAACTATTACAAGTGCGATCAATGTGACAAGTCCTACAAATATATTGTGAGTCTCATTAAGCACAAACATAAGGAGCACAATGAGTACAAGGATTccgatgaggatgaggacgaAGCATCTTCATCGACATATGCTACAGCGACAGCTTCAATGTCAAAGCCTTCCCGCATCGATCGAAGGGTCAAGGGCTTCGATTTGCATCGCTGCAAGCCAAATGGTTCCAAAGAGATTCAATGCATGATCTGCCTGCGAAGATTTGTTAAACTGAGAGAGCTGCGTGATCATCTCAGAGCACATCCCAGAGATTTTACATTCGACTCCCACGCTGAGCCCATTGAACGAATTGCTGAAGGCTTTTACCGGACCGCTGTGGAATCAACGGCTGTCGGTTTGAAAATGCGCATTTTAAATGATCTCAAGATTGGCATGTATGGCCGCTATTATTCCATAACCAATGAGGCGCGTTACGAGATGAATCTGGACAGCTCGGACACGGATAGTGATGGCGAGGCAGGTGTTGTTGAGCGTCGTAGTTATGCCTGCGAATTATGTGACTCGCCCTCCGCCATTTGGTCACGTAAATTTCAGCTGCATGAGCATCATCGTCAGCAACATACTTGGCTGGAGGCGCCCTACGTCTGTCAGCGTTGTGATTCCCGTTTTCTGAGCGCCCAGCTGCTCGACCATCATACTCAGAAGCTCTGCCAGAATACCCTAAAGCGTTTCATGTGCGACAAGTGTCCGCAACGGTTCTTTTGGCGTCGTAATCTTCGTGCACATCTCGTGGAGCATAAAAACAAGcAAGAAAATTACCCATGCGATCAGTGTTCTCGCAGTTTTCAGGATAAAAGTGCCGTGACGAAACACAAACTCATGCACCACGATGTCGGCAATGAGCTGATACCTTGTCGCTGGTGCACACGGACCTTCTATCGCCCAGCCCTGCTTCATAAGCATGTAAAGCGTCATGGCTTCAGTGGAGAGGATCTGCCCTTGGCTGAGACACTGCTGGCGGATGCCGCCAAATCATCCGGACCAAAGACGATTATTTGCAAGCTATGCGATATGCATTTCGTTAGTGTTGCCGATTTGCGAAGACATATTTCAATGCAGGCACATAGCGATGAGTTTCGCAATTATATGATAAGCACAGAGGATGGATTCGAACTGCAGCTAGACGAGACGGACGATAGCGATGATGAGACCACTGGATCTGCTGGCAGGTCCTACAGGTGTGATCTATGCGAAATGGCCTTTCAGCGTCGTAGGGACATGAGCGAACATCAGTATTCCTTGCACACATTCGATAAACTACCATATTCCTGTGAGCATTGCATCTACAAGACAGTTGATAAGAACATGCTGGAGCATCATTTGCGCACACAGTGCCTAAACCAGGAGAAGAAATTCAAGTGTTTGCGTTGTGGTTACAAATTTATGTGGAATGAAAATCTGGAACAGCATATGGCCAGCCAGCATTCCAAATCATCTAACCAGACACCCGTAGCGACCAAGCGAAGTCGACGTTTTAGATATCAGTGTCCGCATTGCTGGCGTTCCTTTGTGGTGCAACCCAGTCTGGACAAGCACATACGCGACATGCATGTGGCCAAAAAGAATCCCGGCAAGAAATATCTCTGCTCATTATGCGGCCTGGAATCGCTCACACCCAACAAGCTCAACATCCACATGCGTCGTCACAACGGCGAGAAACCATTTAAATGCGATCTTTGTGACATGTCCTTCACAGTTTACTATGAACTAAAGGTTCATCGTCGAAAACATACAGGCGAACGACCCTATCAATGTACTTTCTGTGCAAAGGATTTCGCACGTCCGGATAAGCTTAGACGGCACGTTTACATGCACAGCGTTAAACGTTAA
Protein Sequence: MTRTCRICGGADGRYWIETPVDKYAEKTFNQLLLELTRLEVALDQADRFPPWLCRSCAQRLENAYDFVMQARKTHELWIQKMGTEAALDDAEKGTLECLRETPIQLLEIEGVTIKMEEPSEPAMPPADPAISVDPLIKKHMDDASDDDDDVPLKQRKAQHAKLSMLHQCNRCDKAFKYVTNLFRHKQRDHSPVPCKPKIKSGVANAGAERSVPFLHNLIKSSTVDRSSANSDMDNEADNYYKCDQCDKSYKYIMLLIKHKHKAHGANQLPAEPRPIRGSESSSEQTSNVRTTQRQRLKVPSTDSLVHSLIKEIKTPEEDDPDNTGADNYYKCDQCDKSYKYIVSLIKHKHKEHNEYKDSDEDEDEASSSTYATATASMSKPSRIDRRVKGFDLHRCKPNGSKEIQCMICLRRFVKLRELRDHLRAHPRDFTFDSHAEPIERIAEGFYRTAVESTAVGLKMRILNDLKIGMYGRYYSITNEARYEMNLDSSDTDSDGEAGVVERRSYACELCDSPSAIWSRKFQLHEHHRQQHTWLEAPYVCQRCDSRFLSAQLLDHHTQKLCQNTLKRFMCDKCPQRFFWRRNLRAHLVEHKNKQENYPCDQCSRSFQDKSAVTKHKLMHHDVGNELIPCRWCTRTFYRPALLHKHVKRHGFSGEDLPLAETLLADAAKSSGPKTIICKLCDMHFVSVADLRRHISMQAHSDEFRNYMISTEDGFELQLDETDDSDDETTGSAGRSYRCDLCEMAFQRRRDMSEHQYSLHTFDKLPYSCEHCIYKTVDKNMLEHHLRTQCLNQEKKFKCLRCGYKFMWNENLEQHMASQHSKSSNQTPVATKRSRRFRYQCPHCWRSFVVQPSLDKHIRDMHVAKKNPGKKYLCSLCGLESLTPNKLNIHMRRHNGEKPFKCDLCDMSFTVYYELKVHRRKHTGERPYQCTFCAKDFARPDKLRRHVYMHSVKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00579434;
90% Identity: iTF_00528986;
80% Identity: -