Dinn010253.1
Basic Information
- Insect
- Drosophila innubila
- Gene Symbol
- hang
- Assembly
- GCA_004354385.1
- Location
- NC:13925983-13946356[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.33 19 5.6 1.0 3 23 521 542 520 542 0.93 2 18 0.42 24 5.2 3.2 3 22 649 668 647 668 0.89 3 18 0.00072 0.04 14.0 3.3 1 22 778 799 778 801 0.90 4 18 0.083 4.6 7.5 0.1 2 21 813 832 812 833 0.93 5 18 0.00083 0.047 13.8 0.2 2 23 967 989 966 989 0.95 6 18 0.0024 0.13 12.3 0.1 1 23 997 1020 997 1020 0.96 7 18 1.9e-05 0.0011 18.9 0.1 2 23 1106 1127 1105 1127 0.97 8 18 0.00034 0.019 15.0 2.9 2 23 1242 1264 1241 1264 0.97 9 18 0.027 1.5 9.0 0.2 2 23 1273 1295 1272 1295 0.95 10 18 0.00096 0.054 13.6 0.2 1 23 1308 1331 1308 1331 0.97 11 18 0.00015 0.0084 16.1 1.1 1 23 1373 1395 1373 1395 0.99 12 18 0.0023 0.13 12.3 0.9 1 23 1403 1426 1403 1426 0.96 13 18 0.081 4.6 7.5 0.4 2 19 1434 1451 1434 1452 0.94 14 18 8.6e-05 0.0048 16.9 0.4 3 23 1553 1573 1552 1573 0.98 15 18 0.006 0.34 11.0 0.1 1 23 1608 1630 1608 1630 0.97 16 18 0.00071 0.04 14.0 0.6 2 23 1726 1748 1725 1748 0.93 17 18 0.0077 0.43 10.7 0.3 3 23 1804 1824 1804 1824 0.98 18 18 8.1e-05 0.0045 16.9 2.1 1 23 2261 2283 2261 2283 0.99
Sequence Information
- Coding Sequence
- atgtgtgACACtgccgcaacaacaatatcagcCTCAGGAGACGCTGGAACGGGTGTTAgtgctggaactggaactggagcgGGTGACACAGCGGTGACAGCAATGGATGAACAAGCGCAACGTACGCGACAGAATTGTTGTCGCCTGTGCATTGCGCCCGCCAGCGAATGCATTTCGATCATTAACAGTTATGCGGCCGATAAGGAGCCGCTGGCCACAAAAATACATAACTGCGTAAATATTAAGATCACGCCATTGGATCGCCTGTCGCTGCATATTTGTCATGCCTGCATCAGCTATTTGAACTCTTGGCAGAGCTTCAAGAATCGCTGCCTCAGCTCCCAGTCGAAGCAACGACAATGGGTGGACATGGACAGAACCAAACAGCAGACACTATTGGGCTATTTGGATTTGAATCGGGCCGAGAATGGCAGCATTGTtgaccaacagcaacagcagcagcaatcggAATTGAAAATCGATACGGCGACAGCTGCAGCTGAGAAGGCATCCGCTAACATTTTGGATGGCATACCCTCGCTGAAGAAGCGCAAATCTTTAACAGTCTATGTGAGtccaaagcaacaacagcttcaacagcaacagcaacaacagcagcagcaacaactactaTTGCAAACGGCAAGAACGGAGCCACAGCAAACATTGCAGAATCTTTTATTGCAGGTGCCCACAACGGcgacaatggcaatggcaacatcatcacagcagcaacagcaacatcagcagcgcaaatatcagcagcaacaacgtggcaagcagcaacatcatcatcattatcaacaacaacatcatcatcaccaacatcaccaacatccacaacaacagcagcagcaacaacagcgacataGACGCATTCGGCAGCCACGACGACAATCGCAACAGTCAACGGCAACAACTGTTGCTCATCGTTTGCCcaaatttaagccaaaagTGTATTTGCCACTTGACATTGCAGTGCCACCGCTGCCGCCATTGCTGACGACGCCATCGACATCaactgctgttgcaactgcaactgcaactgctactgttgctggtgttgctgagGCAGCTGCATCATTGCCGTTGCCAATGCcattgtcgttgccgttgtcgcAGCCAATTGATTTCAGTCAGTGTAAGAATTCGAGTCAGAGTCAAAGATATGGCAGCGTCAACGTCGCTACCGCTACTGCAATCGCaaccgctgctgctgcaagtgcaactgcaactgcaactgcctcAGGCTCTGCCGCAGGCGCAGGCGCAGTCACAACTCCGCTGCTTATGCCGCCGCTGCCTGCTGTGCCCATCAAGGATGAGCCATTGGATGACACGGACGATGACTTTCAGATGAAGTGCATTGACGAGTCCGATGATATGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAGGGTGATGTGCCACTAATGACCTCCGACTATGATTATACGGCGCAGCATGGCGTAACGGCGGCTGTGGCAGCAGCATCGCTGCCGGCAACCGCTGTGGCAAACGTGGCAGCCGCCGGGGACTCAAAGGTGGCCAGTTGCCGTGCCTGCAGTCTGCAATTCTCGACGCGAGCGAATGCACGACGCCATGAACGGAATTTGCatccgaatctgtttcagCTATCGACAGACTCGCCAAATAATACGCCAATTACAAAACCGACGCCGGCATTGGCAGCCGCATTGGAAATCCAACGTGCGGCTGCcgcggcagcggcaacagcggAGGCAACAAAAGCGGCAGCTGGTGGCAACATATCGACACAGAAGTATCGCCAGGTGGTCATGAACACGTTCATCAAGTGCGAGAACGGTGGCTATGACTATGACAATCCGGAGCAGTATCAGCAATTGTTGAGCCGTGATAAGGTCGAGTTCATACAGGAGAATCACGAGTTTCTCGAACAATATCAAACGATGACGTGTCGATGTTGCAACAAATACTTTAGCAcctataagaattttatggCGCATGTGCGCAAAAAGTATCCCACGTTGCCACGTAACCTGTGCTTCAATTGCCTCAAGATGAACGACTCGAAGGCGTTGTTCATATCGCATCTAAAGAAACGTAACTGCATCAATTTGTATCGTGTGCTCAATGCGTTGCGACTCAAACAGCCAAATTTTGCACATGCCACGGCATCCGGTGTGATTGCAACCACAGAACCGCAGCCGcaggtgcaacagcagcagcagcaacaacagcagcagcagcagcaacaattggtGGTAACAGCACATGAGACATCAGCGTCGTCGGAGCGACCAGAGAAACTGCGAGCCAAAGAGCTGCTGGTGAATAAACTGTATGAGTGTAAACTCTGTCCAAAGGGATTCCGAACGAAGCACGAGTTCCGCACCCATGTCTATGATAAGCATGCGGATGTGCAGCGCAAGGATAACAATTCGATACAGTGCAGCTTCTGTGGCTTGGACTTTGCCGATCCAGTTGATCGGCGACGTCATTATAATAACATGGACTGCATTGTCCGTTTGCGCTGCATGACCTGCGATGCCAAATTGGAGACGCATCAGCGTTTCCTCGACCATGTCTATCAGGATCATTTGGGCGGCGCTGTGAGCAGTGATAATGCCTCAACGGCGAACAGCGGCATCGATCATTCGCCGGGCAAGCGTAGTCTGCTCGGTGCCCTTGGCATTGGTGTCAGTCAATCCTCGAATGATGAAtcccgcagcagcagcaccaacaacaacaacaacaacaccaatgCCGCAAATCCACCAATAACTTCCACACCCAAACCTAcaacattatcatcatcattatcattggcTCAGattggagctgctgctgcaaccaGTGGCGGCAGTCGAGATGCCCCCAAATCCCAGTACTTCTCCCGCATGCCACAGGTCTGTCCGATTTGTGGGCAACAgtacaacaactataacaatgTGCTGCGCCACATGGAATCAAAGCATCCAAATAAATTGCCCGAGACATACAAGTGTGTTCGTTGCGGCCTGGGCTATCCAAGGATCTCATATCTGCGTGAGCATATGATCAATGTACATGGCGTGGACAAGAATCGTCATTCCGGCGGATTTGAGTATATCGTAAATGCGGATGCTGTTAAATTGGCCGATGGCAGTACACCAAATGTCTATACCGGACGCTACGATTATGTGATGAAGGATCTGATGTCCATAACAAATGGTGGGACACTcgatgatgatgatgaggaagGCGGCAGCATTGCCAAAAAGATGCGACTCGAcgatagcagcaacaacagtagcatCAACACAAGCATCGCCAATCAGCAGAAAGAGTGCCCCATTTGTAATGCCGTGTTCAGTAATAATATTGGCCTATCAAATCATATGCGCTCACATTACACAGCCTCATCGACGGCAACAAATGCAGCATTGGCGGCTGCCAATCGAATGACACCCAAATCGTTGACAATTACAGCAACACCGCCACTTGAGGTGGCAGCCACAGCGTCAGTAGCGactgcaacggcaacgtcGACCGCAACAATATCTGCCTCCATAAgcaacgcagcagcagcagcaacaacagcaacaccagttagcacaacagcaactgcaatatCTGCGACAGCAACGGGAGCAACAAAAGTGCCGCCGGCAATGGTGAATCAAACGCCACAGGAACAGGCCGTATTCCGTCGAAGTTTAGATCAAGCGGCAGATCGTCGCTTTCGTCGGATGCGTTGTCGTATCTGTCAGCGTAGATTTAGCTCCAAGAAATCGTATCGTTATCACATGCTGACCGATCATCAAGTGCAAAATGTGCAGTTTATCAAATGTAAATTGTGCAACGCCGAGTTTGCCTACGAGAAGGGATTGAAGGTGCATCTGTTCAAGGTGCATGGGCGTGCCATCAAAGATGAGATGATTATCAAACAATTTGAATGTGATGTCTGCTCCATTGTCTACAGCTCGGAAATGGAGTTGCAACAGCATAAACGCAGCGTTCACAAATCACATTCGGGCACGAAATCATCACATCAATCATCTACATCTACATCTACAGCTACTGCTACCTCTGCTGACCTGGCCGATACATCCGCCAGTGCGTTAGCTGTCCTGCCATTATACTGGTATCAGTGCAAGTATTGTCCATCCAATTTCAATACCAACAAGAAACTGGCCATTCACATCAATTCCCATGATGAGTTCGATTCCAATGATTATTCCTGCAAGGATTGCGGCAACGTCTACAGCGGACGCAAGAGCCTCTGGGTGCATCGCTATAAGAAGCATCCGCAGGTACCGGATCCGGCGGAGTGCACGCTGTGCCGCAAGATGTTCTTTGATCGCCAGATGCTGGAGAATCACACTCCCACCTGCAATCGCAAGCCCATCACGGCCACGGGAGCACATCAGcaggatcaacagcagcaacagcagcagttgcagctgcaacatcaaCGTGGCATCTTCAAGCACAAAACGGGCGACGATGATgacgaggatgatgatgaggatcaTCAGATGATGATAGATGAGGCTGGtgctggtgttggtgttggcaaTGTTGCTAGTGATGGCAGCAATGGTGGCAACACTGTGGCAGCTGTCACCAGCAATACGAACACGATCAGTACAAGCAGCTTTAAGATACGCATACCAGAGGTGGCATGCACCATTTGTGGGGCACGCTTCACCGACCAAGAGATGTTCAGCAAGCACATCCAGAAGCATGAACAAGAATTATATGTGGATAATCCATTGGCTGCCATGTTCGATGATGGTCCAGCCGATGCGGGACAATTTCAGGTGGAGCGACAAAATGAGAATGGGGAATATGCTTGCGATTTGTGTGCAAAGACGTTCCCCCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAATCCCATCATCGACGGCGAAGCGACAATGctgaacaacaacaccaacaacaacaacaacagcagcagcagcaacagcaattcgATGTTGCATCTACGCGAATTGCATGCGGTGGGTCTGATGCCCAATCAACAACatcagaagcagcaacagcagctgcaacaacaacagtctcagtcgagcagcagcaacaacaacaacaacagcaacagcaacaacagcaactcatCAACCAGCAAATCGATGAAACGGAAACGTGAATTGAAATGCGAATATTGTGCCTCAACATtcattagcaacaacaacctgcGTCGCCACATGTACGAGTTGCACAAACATGAGGTCAGCAATCTACCCGAGCCGCCAGTGATTGAAGTGGATGAACCGTTGTGTTGTCGTCGTTGCGGTGATTTACAATTTGAGACGAAGGAATTGTGGATCGAGCACAAATTGTCGGATGCAAAGGTTGTGCGTCCATTTTGTCCATTCCAATGGGGCTGTGATCTTTGTGGCGAGTATTTGTCGCGCAAGGAGAAGCTCATCAATCACATTAACAATCATCTTAAGGAGGAGGTGATTGTGCCAGTTGTTGTCAACGCAAAGACAACAAAGAActtatcagcaacaacaacgacaacgacaacaacagcagcaggcacaagcacaacaacgacgacagcaacaacagcaaaggcaacaagtggaacagcagcaacagctgcagccacaacaacaacagcagctacagcagcgacaacaaatgcaacaacaacatcaggcAAAGTGCTGAAAGTCAAGGATCTTGAAAGTGAGAGAGGAGGAAAGTTGAGTAAACAGCGTGCAAATGATAATGTGGAGCAACAAGATGAGGAAAATGAGGATGATAGTGATATGGATGATGATAGCGATAgcgaggatgatgatgatgacgatgatgatgatgatgaagatgatgatgaggagaATAGCACAaccgatgatgatgacgataatGATGTcgaggatgaggatgacgaTGTAGATGATGAAGCGGAAGGGGAAGATGTTGTTGCACAGCAgcaattgttgcaacaacctcagcagcagcagcacaacaacaacaacaacaatagcaacagcaatgcaattgacaacgatgatgatgatgatgacgatctCATTGAGGAGGTTATCGAAGAGATTGACGatgacgacggcgacggcgatgGCGATGTACATGAACAACATGTGGTTGCCGCCAaagcgaacaacaacaaagtgagCATTGATTATGCGCGCACGAGCAACGCCAAGTTGAATGGAAATGGTGGCAAAAAGGCAAAGTTGCTGATCATGCATAGCTCTgaggaagatgatgatgatgatgatgaggaggaggatgtggaaatggaaatggcagAAGAGGAGGACGAAGAGGGTGTACACGTGGGGGAAGTAATGACCATTGATGATATTATTGAAGAAGATGATGGTGAGGATGATGACGATGTGGTTGGTGTTAGTGGTGATGTTGTTGaagaggatgatgatgatgacaacgacaacgacgataacgataacgatgatgatgatgttgatgaggaagaggaggaagaCGAAGACATTGACGAagatgacgacgatgatgatggcgACGTTCATAATGTGGGTCGTCGTAATCGTATCGATGATGGTCGTGCCAACATCGGTGGTGATGCTGTCGATGGTGAGGGTGATGGCGATGTCgatggtgatggtgatggtgatggtACATCATCATCCGAAAGcgattcaacaacaacaacctcgCATTCAACTGGTGAGCGGCGTAAAAAAACTGTAGTTTCATCAGCGGCACATGGCGATGCCGCTGATCAGTCTAATTCCAGCTATACGTGTGATCTATGTCAACTTTGTTTCGATTCTCAGGAGCTTCTGCAGACACACATTAAAAGCCATTTTCTCAATGGGCCAACGGCgggcagcaaaagcagcagcagcagcagcagtggcagtggcagtggcagtggcaacaacagcagcagcaacaaaaacaacggcagcagcagatgCAGCAGTGGTGCCGccagcagaagcaacaacaatataattaatagtaacaacaataataaaagcaaaaccaaaaagtcCGGCTTGTTGGATGCTGCCAaatgtggcagtggcagtggcagtggcagtgcaacaaccacagcaacagtcacagccacagcagccacagcagcaacagcaacaacggcaacaacaacgacgtcgacgtcagcagcgactgtgacagcggcagcggcagaagCTGCAGCGCGCTTGAACTGA
- Protein Sequence
- MCDTAATTISASGDAGTGVSAGTGTGAGDTAVTAMDEQAQRTRQNCCRLCIAPASECISIINSYAADKEPLATKIHNCVNIKITPLDRLSLHICHACISYLNSWQSFKNRCLSSQSKQRQWVDMDRTKQQTLLGYLDLNRAENGSIVDQQQQQQQSELKIDTATAAAEKASANILDGIPSLKKRKSLTVYVSPKQQQLQQQQQQQQQQQLLLQTARTEPQQTLQNLLLQVPTTATMAMATSSQQQQQHQQRKYQQQQRGKQQHHHHYQQQHHHHQHHQHPQQQQQQQQRHRRIRQPRRQSQQSTATTVAHRLPKFKPKVYLPLDIAVPPLPPLLTTPSTSTAVATATATATVAGVAEAAASLPLPMPLSLPLSQPIDFSQCKNSSQSQRYGSVNVATATAIATAAAASATATATASGSAAGAGAVTTPLLMPPLPAVPIKDEPLDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPLMTSDYDYTAQHGVTAAVAAASLPATAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISTQKYRQVVMNTFIKCENGGYDYDNPEQYQQLLSRDKVEFIQENHEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPTLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRLKQPNFAHATASGVIATTEPQPQVQQQQQQQQQQQQQQLVVTAHETSASSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGAVSSDNASTANSGIDHSPGKRSLLGALGIGVSQSSNDESRSSSTNNNNNNTNAANPPITSTPKPTTLSSSLSLAQIGAAAATSGGSRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEEGGSIAKKMRLDDSSNNSSINTSIANQQKECPICNAVFSNNIGLSNHMRSHYTASSTATNAALAAANRMTPKSLTITATPPLEVAATASVATATATSTATISASISNAAAAATTATPVSTTATAISATATGATKVPPAMVNQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECDVCSIVYSSEMELQQHKRSVHKSHSGTKSSHQSSTSTSTATATSADLADTSASALAVLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCRKMFFDRQMLENHTPTCNRKPITATGAHQQDQQQQQQQLQLQHQRGIFKHKTGDDDDEDDDEDHQMMIDEAGAGVGVGNVASDGSNGGNTVAAVTSNTNTISTSSFKIRIPEVACTICGARFTDQEMFSKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIIDGEATMLNNNTNNNNNSSSSNSNSMLHLRELHAVGLMPNQQHQKQQQQLQQQQSQSSSSNNNNNSNSNNSNSSTSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDEPLCCRRCGDLQFETKELWIEHKLSDAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEEVIVPVVVNAKTTKNLSATTTTTTTTAAGTSTTTTTATTAKATSGTAATAAATTTTAATAATTNATTTSGKVLKVKDLESERGGKLSKQRANDNVEQQDEENEDDSDMDDDSDSEDDDDDDDDDDEDDDEENSTTDDDDDNDVEDEDDDVDDEAEGEDVVAQQQLLQQPQQQQHNNNNNNSNSNAIDNDDDDDDDLIEEVIEEIDDDDGDGDGDVHEQHVVAAKANNNKVSIDYARTSNAKLNGNGGKKAKLLIMHSSEEDDDDDDEEEDVEMEMAEEEDEEGVHVGEVMTIDDIIEEDDGEDDDDVVGVSGDVVEEDDDDDNDNDDNDNDDDDVDEEEEEDEDIDEDDDDDDGDVHNVGRRNRIDDGRANIGGDAVDGEGDGDVDGDGDGDGTSSSESDSTTTTSHSTGERRKKTVVSSAAHGDAADQSNSSYTCDLCQLCFDSQELLQTHIKSHFLNGPTAGSKSSSSSSSGSGSGSGNNSSSNKNNGSSRCSSGAASRSNNNIINSNNNNKSKTKKSGLLDAAKCGSGSGSGSATTTATVTATAATAATATTATTTTSTSAATVTAAAAEAAARLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00575750;
- 90% Identity
- -
- 80% Identity
- -