Basic Information

Gene Symbol
Camta1
Assembly
GCA_004354385.1
Location
NW:1285908-1347432[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6e-49 7.9e-45 150.9 2.2 2 116 401 513 400 513 0.98
2 2 0.63 8.3e+03 -3.9 6.6 18 96 665 749 649 792 0.70

Sequence Information

Coding Sequence
atGAATCtaaatctcaatctcaatctgcAGCAAaGCAATATAAAGAATGGCCTAAGCCGTTTTAGCCTGGTCAAATCGCAGAGCAGTGGCAAACTGAGTCTTAGCAATGAGGTCgatgctgcagcagcaacaacaacagcaacaaaaacgacaacaactagtTTACGTGCTGCCAAACTCAAGATCGAGgcaatgcaacaacagcaacagcagcaacaacaacaacagaaacagagcAACATTATTTTGTTGCGTGGCACACGCAATGAAAATGGCCAGATCATAATACAGAATAAACAGGATATACTTAGTCTGATTagcgagcagcagcaacaacagcaacaacaacaggataAAGCCACGGCCATAACACTTAATcaattgccaacaacaacaactgtggcaCGCAAAACTATCGTGCAAACATCgacaacaagcaacaattcTTCTGGCAGCATTTCCATAGTCTCCAGCAGTGGCAAGGAATCGAATACGATACTCTTGCAAACGCCGATTAATGCCAGCCAATTGGAGAGTGTGCTCAAGGCTCaaaacacagcagcaacaaagcaacaactcaacaacaacaacagcagcaacaacaacactaagcTCATCGAACGTCCTTTTTTGCTTAAACATGCATCTCGCAGTCTCAGCTCGGAGAGCAACTGTGAGAGCAAATCTCCGTTTGTGCTGCAGACGCTCAAGCGACTGGAGAAATCGCAATCGATACTTGTCATACGCAACTCGACATCGACGACAGATCGAGCGGCAGTTGCAAGCACAGCGATCGATAATAAGAGTCACAATGTTGCAACAtcgcagctgcaacaacaacaacatcatgtGTTGAGCGTCACACGCACCGCCAAAGCATCAAAGGCTGTGGCTGCGACATTGCACAAACTGAAGGCACCACAAAGcaatgttgttgcaactgcaactgcaacgacaactgcaacatctgcaacaacaattttgagaCTAAGCAAGAGCGTCAACAAGCaagtgacaacaacagcaacagcaacaacaacagcagcagcaacagcaacaacaacgtcggTGGCAACATCTAATAAACTTGCCACAACAGCAATGGAGCAGCAAACGAATGTGCCACTTGGGAGCGATGGCGAACCTATCAAACTGCCCGACAATTTGGAGAGCCTGCCAAGAGCCGACAGTTTTCCATCGCAACGCCATCGTTGGAATACAAATGAGgAAATCGCGGCGATTCTTATCAGCTTTGATAAGCACAGCGAATGGCAATCAAAAGAAGTCAAAACACGaCCTAAGAGCGGTTCCCTGCTGCTTTATTCCAGAAAGAAGGTGCGATACAGACGTGATGGTTACTGCTGGAAGAAGCGCAAGGATGGAAAGACAACACGCGAGGATCACATGAAATTAAAAGTACAAGGCACTGAGTGCATCTATGGTTGTTATGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGTTACTGGCTTTTACAGAATCCGGATATTGTTTTGGTGCATTATCTGAATGTGCCATATCCGGATGATAATAAAATGGCCGTCATTGCGCCGAGCATAACACTCTGGGGCGATAAGAAGGAATGGACCAAGGAGGAGTTGGTCAGTCAACTGAAGCCTATGTTATCTACAGTGAACTCGGATGAAGATTCGGACTCGGGAAATGATATAGAAATATCGacTGCAGAGACAGTGGAGTCGATTGTCTGTCAGCTGATGGAGAAGCAGCGTCTGTCGCGACAGGCGGCGTTGGTGAAGCAACTCGATTGCGGCTGTGGGGATGCAACTTGTGCCGATGGCAAGACTTGCACACACCCTGTAATGCGACGCACGGGCATATTGAAGTCGGTGTCGGAAAAGCGGGCAAATGATGCCTACAATGGACAAAATGGCACACCCAATGTTGTCGTGGCCAGCAAGCTCTATTCGCGTTGGTCGGAGCGTCATAGGCAAAGAGAGGCGGCATTGCATTTGGATAATCCGCACTCGCAGTTCCACAATGCCACGCAACAGTTGCCACAAGAGTCGGCAATCAAATTCCAAATCAttccgcagcaacagcagcaacaacagcagcagcaacagacagATAACAGCAACTATCAGCAGCAATATCGTGGTGCCAATCAAATGTTGGCCACAAGAAGCAATCTGATaatacagcagcagcagcagcaacatcaacaatatcaacaacagcaacaacaacagcagcaacaacaacagcaacagcaacaacaacagcagcacttGAACTTGCAACGTTTTGTGGCCAGTCACAATCAGAGCAATCAAagtcataatcataataacaacagcaacaacaacaacaacagcagcaatacaGCACATTTAAATCATCGCCTGCAAATTGCcaatacaacaataacagcaacaacaagagaggcggcagcagctgctgcagctgcaacaacaacaacaattgcctCAAATATCATGGATACAGAACTAATTGAAAATCCGGCCACAAAAATAagccacaacagcaataacagcagtAAGCAAttaacagcaataataacaacagcagcagcagcagcagcaacaacaacaacaagagacactgcaacagcaacagcaacacaaacaaacaacgaaTTAAATATCGTAAATAATAATGGAAGCAGCAATAACTTTGTATacaatcaacagcagcaacaacaagtgaaTGCTgttagcagcaacaacaacaacagtcagcagcagcattattataaattgcaacagacaacaacaacagcagcagcagcaacaacaaccccCAACAACAATATGCAACCCCCAGTTGAAGCCATGTGCATGTCACCAGAGCATCAACTGAGCAGCgggggcagcaacaacagcagcaacaacagcaacagcaatagcaatcacctcagagcaacagcaacaacgtctTCCGCTGGCAACACTCCTTCCACGTCAGCAACCACATCCACCTCGAGTTCCTTACAGTCGATTATCGATGgcaatcagcagcaacaaatttcaacctcaccagcaacaacaacaacaacatcagcagctgcagcagcagcaacatcagccacagcagcaacaacagcaacaacaaattgtgatTATTTAATGAGCTCCAATGCGCTCGCTGAGCTGGAGTTGGgcgagcagcaacagcaacatcaacagcagacAACAAGGAgctacaacagcaataacaacaacaacaacaacaacagcaacaacagcgtcaACAATCAGGCTACGGCCAACATACATAATGGTTGTGCAAACTTTAGTGCTTCCAGTGATAACAGCAGCCAAATTAGCGCCAGCGATGACAGCAACTTTggcgccaacaacagcaacagcaacaacaatcagagcaacaacaacagcagcaacaacaacaacgaagaaGAAACACCAACGGAAACGTTGAGTTTCTTCAATGAAACTTTAGATCTCTCTCATGAAGATATACAACGTACACTTATAGCCAATATGccgtacaacaacaacaacagcaacaatgcaacaacgacaacagcaactgcagcagcaacagcaaaaactacagcagcagcaacaacagcaacaactgaacagcaacaacaacaacaggcaatCAATGTAGAATCCCCTCAAGCTGAGGATGAAGACACCGCCGATGTCTTTGCCAATTTGGATGCATTTGATATGCTCGTCGAATTTCCGGAACTCGATTTGGATGATAAGCAGGCATTGAACAACACTGCTTTGGAACAGGAGCAACATCATGGCCAGAATTTGCAATCCTCATATTTAGATTCATCACATTCATCACAAACTCAACGAAAGCTGCTCAACATTTGTGATTTTAGTCCCGAATGGTCCTACACTGAGGGCGGTGTTAAGGTCCTTGTCGCAGGTCCTTGGACAAGTGATGGCGGCTGTTATACGGTTCTATTTGACGCTCAACCTGTGCCCACGGTGCTCGTTCAAGAGGGCGTTCTCCGTTGCTATTGCCCCGCCCATGAGGCAGGTTTGGTCACACTGCAAGTGGCATGCGGCGGTTTCTTGGTCTCCAGCTCAGCAATGTTCGAGTATAAGCTCTCACTGCTCGCCGATGCTCCCTTCGATGCCAGCAGCTCCAACGATTGCCTCTACAAGTTCACGCTCCTCAATCGTCTCTCCACCATCGACGAGAAACTGCAGCTCAAAGTGGAGAATGAACTGGCGACGGATCAGACAGCACTTTATCTGGAGCCCAATTTCGAGGAGAAACTCGTAGCCTATTGTCACCGGCTGATGAAACACGCCTGGAACACACCGAGCACCGTTGCCAGCTGGAGTGTTGGACTTCGGGGCATGACATTGCTCCATTTGGCAGCTGCACTTGGATATGCCAAGTTGGTGGGTGCCATGCTCAATTGGCGTGCCGAGAATCCACATATCATACTCGAAACGGAGCTGGATGCACTCAGTCAGGATGTGCACGGATTTACACCATTGGCCTGGGCCTGTGTGCGTGGACATTTGGAGTGCACCATGTTGCTCTACAAATGGAATCACAATGCGCTGAAGATCAAGACACAGGCACAACAAACACCTCTGGATTTGGCCAGTCTCAAGGGCCACAAACAATTGTTATCACAACTCTGTCGCATGGAGCGGGAGCGTTGTCGCAAACCTCATCCACGTGGAGGTCTCGCAAATCTCTCCATGAACCTGGCCAATGAGACGGCCTCTGAGGATCCCAACTACAGTGTCTACGAATTGGAATTTCAGCGCAGACACGACGGTGTCTTCCTGCGTCCTTCCGTTGCTTTACACAGTAATCAAAGTCCGCCCAATAACAACAGTCGCTACTCGAAGCGTTCCTCAATCGACAGTGGTATCAATATGGATATGCGCAGCAAATCCGGCAAACCTTTAGCTCGACTTCATGGCAACTTTGATGGACATGATAATTATGCATTGGGCGTGGACTCGCCATTGGATTCGCTTTCCGGCAATAATTGCTCGGGATTATTGTCACCGTTGCGTAAAATGGACTTTGCATTGTGGGATTCGGATGCCAAGGTGCTGACGCTGGCGGAGCACATCATTGCAGCGATGCCAGAGAGGATTAAGAACGAAGCTGATGAGATGATGGTCTTGGGCAGTCCGCTCACTGAACCGCTCACCTCGGAGTCATCGGCTTTAACGGATAGCTTTATGGATCCTTTGCTGGACTCGCTGCCGAATACGCATTTCGATAGCGACTTTAGCTTTGATTTTCACGATCACAGCTATCGTTATCACGATGTCAGCACTCCCTGTTCCAGTCTAAGTCCGGCTAGCTCGGGTCCATTGCAATCTCCAGCCAGCTATTCTATACTGGGCACAGATCCCTCTGTCAGTTCGCCGAGTCCGCCGCCATCGACGAAGCAACTAACAGAATTCCTGCATGCCTCGAGTATTTCACAATATCCCTTCGAGGCGGACTTTTCGAAACTAACGTTAACCGACACCGAGCAGAGGGAATTATACGAAGCAGCCAAGTGCATACAGAAAGCCTATCGATCCTACAAAGGACGCCAGAAGTTGGAAGAGCAGAACAAGGAGCGCACAGCCGCCATTGTTATTCAGAATTATTATCGGCGCTATAAGCAGTACGCCTACTACAGGCAGATGACAAATGCCGCCTTGGTTATCCAACACGGTTATCGCTCCTATCGCCGGAACAAGCGCTTCAAGAAGTCCCAGCACACTACGAGCGGACTGGGAATGGGCATGGGACTGGTAACTGGCAGTGATCATGGCAGCGTTAGCAGCAACTCACAGTGCCTGTCCAGCTTCTATGATCACTACAAGCaggatcagcagcagcagcagcagatcgACCTGAGCTCACAGCCCAGCACGCCCAAGGAGACGAGTCCATCAGGTCCCTTGAAGCGCACTTATTCGCAGTCTACACAGAATCAGGCTGCACGCAAAATACAACAGTTCATGAGACAATCACGCATCAAACTACAGAGAGAGCGAGCCGAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTTTCAAGGGCAGCAGGAAATGTTAATTTGCCATAGTGAAAATggcAATCAGCAGCTGCTGGAACAGATGCAATCCAATCAATGA
Protein Sequence
MNLNLNLNLQQSNIKNGLSRFSLVKSQSSGKLSLSNEVDAAAATTTATKTTTTSLRAAKLKIEAMQQQQQQQQQQQKQSNIILLRGTRNENGQIIIQNKQDILSLISEQQQQQQQQQDKATAITLNQLPTTTTVARKTIVQTSTTSNNSSGSISIVSSSGKESNTILLQTPINASQLESVLKAQNTAATKQQLNNNNSSNNNTKLIERPFLLKHASRSLSSESNCESKSPFVLQTLKRLEKSQSILVIRNSTSTTDRAAVASTAIDNKSHNVATSQLQQQQHHVLSVTRTAKASKAVAATLHKLKAPQSNVVATATATTTATSATTILRLSKSVNKQVTTTATATTTAAATATTTSVATSNKLATTAMEQQTNVPLGSDGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDEDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDATCADGKTCTHPVMRRTGILKSVSEKRANDAYNGQNGTPNVVVASKLYSRWSERHRQREAALHLDNPHSQFHNATQQLPQESAIKFQIIPQQQQQQQQQQQTDNSNYQQQYRGANQMLATRSNLIIQQQQQQHQQYQQQQQQQQQQQQQQQQQQQHLNLQRFVASHNQSNQSHNHNNNSNNNNNSSNTAHLNHRLQIANTTITATTREAAAAAAAATTTTIASNIMDTELIENPATKISHNSNNSSKQLTAIITTAAAAAATTTTRDTATATATQTNNELNIVNNNGSSNNFVYNQQQQQQVNAVSSNNNNSQQQHYYKLQQTTTTAAAATTTPNNNMQPPVEAMCMSPEHQLSSGGSNNSSNNSNSNSNHLRATATTSSAGNTPSTSATTSTSSSLQSIIDGNQQQQISTSPATTTTTSAAAAAATSATAATTATTNCDYLMSSNALAELELGEQQQQHQQQTTRSYNSNNNNNNNNSNNSVNNQATANIHNGCANFSASSDNSSQISASDDSNFGANNSNSNNNQSNNNSSNNNNEEETPTETLSFFNETLDLSHEDIQRTLIANMPYNNNNSNNATTTTATAAATAKTTAAATTATTEQQQQQQAINVESPQAEDEDTADVFANLDAFDMLVEFPELDLDDKQALNNTALEQEQHHGQNLQSSYLDSSHSSQTQRKLLNICDFSPEWSYTEGGVKVLVAGPWTSDGGCYTVLFDAQPVPTVLVQEGVLRCYCPAHEAGLVTLQVACGGFLVSSSAMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQLKVENELATDQTALYLEPNFEEKLVAYCHRLMKHAWNTPSTVASWSVGLRGMTLLHLAAALGYAKLVGAMLNWRAENPHIILETELDALSQDVHGFTPLAWACVRGHLECTMLLYKWNHNALKIKTQAQQTPLDLASLKGHKQLLSQLCRMERERCRKPHPRGGLANLSMNLANETASEDPNYSVYELEFQRRHDGVFLRPSVALHSNQSPPNNNSRYSKRSSIDSGINMDMRSKSGKPLARLHGNFDGHDNYALGVDSPLDSLSGNNCSGLLSPLRKMDFALWDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFHDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSQHTTSGLGMGMGLVTGSDHGSVSSNSQCLSSFYDHYKQDQQQQQQIDLSSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQNLQFQGQQEMLICHSENGNQQLLEQMQSNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-