Basic Information

Gene Symbol
-
Assembly
GCA_004354385.1
Location
NW:13041595-13044402[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 6.1e-11 4.7e-08 32.6 0.1 1 41 238 279 238 284 0.91
2 4 0.00017 0.13 12.0 0.0 3 44 295 340 295 342 0.84
3 4 3.8e-06 0.0029 17.2 0.0 2 46 349 394 348 394 0.90
4 4 1.4e-12 1.1e-09 37.8 0.0 3 43 402 443 400 445 0.96

Sequence Information

Coding Sequence
ATGTGCGATGCAGATGACCAGAGACTGAATTATCAGCAGATGCTAACGGAGATATCATCGGTGCTGGAAACTACCGCCGAATCTAGCGATGCAaacgctttaaaattaaatcaggAGCTGCAGCGGCGTCTGGAACAAGTGCGCACATCTATGCTGGAGCTACTGAAGCAAGTGCGTGCTCGCTACGCACGAAACGAGGAGATACTTATTCGCCGGCTAAAGCCGCGTACTCGTTATTCAGTATTGGGAAGCGGTTCCGTTTCCGAAAACATTGGCCAAAGTGGCGCGGTTCTTCGGGGTGGAACCTTTCGTTTCAAGggcaatttatattttcgagATGTGGACGGGCGCAGCTGTCCCAACAATGAGGATTACAACAGTCGCTGTGCCACTGAAATGTTTCCCACGGATTTCGATATGCGTTCCAAACATGTCTGGACAGTGCTCGACAAGAAGAACGTGGTAATGGGCATTAAGCAGCAGCTGCTCGATCATATAACCGAGCAATCCAAAACAGAACCAACTATcagcaaaccaaaaaaacGCAAAGCCATTGATTTACATGAGCAAACGCTGGCCAGTCTCCTTAATTCAGCCGATAGCAGCTTTAGCATTGACTGGAATCAAATTAGCACACTGGATGTTGAGCTTCGTCATTCATCCTACAGCTGTGAAGCCATGTGGCTTGTGTATTTACATCCGCAGCTTAAACGTGACGATTGGACAAACGAAGAGGATGAGAAACTGGTAGATGCGGCACGGGCCAATAAGCTGCAAAACTGGAAAGCGATTGCGGCTGCAGTGCATCAGCGGTCCGAATACCAATGCTTTGTCCGCATGCAGACAACGCTAAGATTTAACCTGGAGCCAGCGAGTAACTTCAAATGGAGTGAACTGGATAATGAGAGACTGCGAAATATAGTATCACAAAATACGGTGAACGGTGTTATTAATTGGTCCGAGGTAGTCGAGCACTTTCCGGGACGATCCCGATCCACATTAATTGGACGTTACATGTATGTCCTGCATCCCAGCATAAGTCATGAACCCTTTACCCCTAAGGAAGATTTGATGCTGTTTTCTGCCTTTGAGCAGTACAATGGCAAGTTCAATTGCTTTCCACGCACACTGTTTCCAAATCGATCGCTGGCACAGTTGCGGACCCGCTACCACAATGTGTTGGCCCAGCGTAATAAGACGGACTCCTGGTCGGTGGAGGATGATTCCAAGTTGATAGAATTTGTGTCCAAGCATGGCACCTCTCAGTGGGTGAACTGTGCCAATCATTTGGGTAATCACACGCGTACCAGTTGTCGCACACGCTTCCTGGTCATCAACCGTTTTGTGGAGCAGCATCCTAATGCCCAGATTTCCGACATACCCCGTcgaaagacaaacaaaaaagccCAGGTAACCGCCGATAATTGGACGCAACGATTGGAGGAATTCAATGAAGACCCGGATTCATTACTCTCTATGGATGTAACTCAGCAAAATCCTAAACCGAAGAAGATCAAACAGGAGGCACTGAGCTATGCAGACACTTTACGTGGCTGGGACCTTCGCATCTATGATTACTTTAAGTTTGCCTATAATCTTAACCTGCGATCTGCCCCGACACCCGTTCCCCTACCTAGAGATGCACGTAACTTCTATGCTGTAGCCAACGCCCTGAGCTTCAGACCACCAGCCACCGGTAACAGGTTAATTGAGAGCTTTTCACTGTGCCGGCAGCTAAGTCGGTGCtacaataaaatgttatgtCAACTGCCTCCGCCGCCTAATGATATGAAAGCAACACCAACGGATCAGCTGCTGCCACCTAATTGGTCCACGATGATGGGGTTCCGTTCCATTTGCATATGGCATTGTTGTAATCAAGCAACCAGCGTACAGTCGACATTTAATTACGATGAATCTCATCCAGCTGTGCAGCTATTTCGACAAAGGTTACGTACCCTCTTCTATCGGACCATACTCTTGAGTCGCCTGGAGACAACCGAGTTTGCGCAGCTGCCAGAGGCGTTGATGCAGCAGCCGCGTCCAGTACCAAACTGCGCCCTGCCAGAGACGGGTAAATGCGTTAATCCCACATCGCATCGTCAGCCAAAGAAGCAGCTTAAGTTACAGAAATCTAAAGTAATTAGTGGTTTGAGAGCCCAAGAAACGGCGCACAGGCAAATCCAAGATTTGGAGCGTATGACGAGTGTGCGACATAGTCTAAAATCCGAACCAAATGACTCCCACGATGTGCTTAATGTTAAGCAGGAATTATCCTTTGACTAG
Protein Sequence
MCDADDQRLNYQQMLTEISSVLETTAESSDANALKLNQELQRRLEQVRTSMLELLKQVRARYARNEEILIRRLKPRTRYSVLGSGSVSENIGQSGAVLRGGTFRFKGNLYFRDVDGRSCPNNEDYNSRCATEMFPTDFDMRSKHVWTVLDKKNVVMGIKQQLLDHITEQSKTEPTISKPKKRKAIDLHEQTLASLLNSADSSFSIDWNQISTLDVELRHSSYSCEAMWLVYLHPQLKRDDWTNEEDEKLVDAARANKLQNWKAIAAAVHQRSEYQCFVRMQTTLRFNLEPASNFKWSELDNERLRNIVSQNTVNGVINWSEVVEHFPGRSRSTLIGRYMYVLHPSISHEPFTPKEDLMLFSAFEQYNGKFNCFPRTLFPNRSLAQLRTRYHNVLAQRNKTDSWSVEDDSKLIEFVSKHGTSQWVNCANHLGNHTRTSCRTRFLVINRFVEQHPNAQISDIPRRKTNKKAQVTADNWTQRLEEFNEDPDSLLSMDVTQQNPKPKKIKQEALSYADTLRGWDLRIYDYFKFAYNLNLRSAPTPVPLPRDARNFYAVANALSFRPPATGNRLIESFSLCRQLSRCYNKMLCQLPPPPNDMKATPTDQLLPPNWSTMMGFRSICIWHCCNQATSVQSTFNYDESHPAVQLFRQRLRTLFYRTILLSRLETTEFAQLPEALMQQPRPVPNCALPETGKCVNPTSHRQPKKQLKLQKSKVISGLRAQETAHRQIQDLERMTSVRHSLKSEPNDSHDVLNVKQELSFD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00575508;
90% Identity
iTF_00506788; iTF_00575508;
80% Identity
-