Basic Information

Gene Symbol
osa
Assembly
GCA_004354385.1
Location
NW:18792461-18817524[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4 2.6e+03 -1.5 0.0 12 46 779 816 774 819 0.82
2 2 6.2e-26 1.2e-22 79.7 0.0 3 89 1027 1110 1025 1110 0.94

Sequence Information

Coding Sequence
atgaatgaaaaaataaaatcgccTTCAGCACAGGGTGGtagtggtggtgctggtgctgctgctggtggtggtggtgcagcTGGTGGAAATTCAGCTCCATCGGTTGCCGCAAGCGCCGGAGGCGCCACACCACCCACATCGGGTCCTCCCACGCCGAACAATGGCAATGATCCtaacatacaacaacaagccGGCACTGTACCGCATCCCTATGGCGGACCGCCACCCGGCACAGCGCCAGGTGCACCACCTGATCCGGCAACTGTTATGTCGCACTATCACCATctacatcaacaacaacagcaacagcagccacaacatcCACAGGGTCCACCATTACCACCACATATGCAACACCACGGTGGGCCACCTCCGCCACAGGGACCACTGCCTCTGCCAGGAGCGCCTGAGCATACGCCCGGTGTGAAGGATGAATATGGCTCAGCACATTTGCCTCCGCCACCCGGCGTACAACACCAGCATGCCCATCCCGCCTATGCGCGTTATCATTCGGGTGATCCCAACATGGATCCCTATCGCTATGGACATGCGCCCACGCAGCAACCACCTCCAGGCACTAAACCGccgcaccagcagcagcagcaacaacaacagcagccgcaagGTGCTGGAGGATCGCCAAATCGACCACCACAACAGCGATATATACCCGGACAACCGCCGCAGGGTCCCACACCaacattaaattcattattgCAATCGTCAAATCCGCCGCCACCGCCCCAACATCGCTATGCGAATAACTATGATTCCCAGCAAGTTGCCAATGCAGCGGctgcggcagctgcagcacaacaacaacagcagcagcaacaacaacagcagcagcagcatcaacaaaaTGCCCAACAGCAACCTGCCGGGCCACCGCCCCCACTCCCCGGCCATGGGCCACCGCCGCCACAACATCAGCCATATGGTGCGCAACAGGGCGGTTGGGCACCACCGCCAAGGCCCTATAGCCCACAGCTAGGACCATCGCAGCAGTATAGGACACCTCCACCGCAAAGTACTTCCAGAGGTCAATCACCATATCCGTCAGCTCACAGTCAAAACTCAGGTTCCTATCCAAGTTcgccccaacaacaacagcagcagcagcaacaacaacaggcgcaacaacaacaagcggcaCAACAGTCCGGTGGTGTTGGCCCACCTGGAGCGCCGCCGCCACCTCCAGGCCcctcacagcaacaacaacaacagcaaaatacACCGCCCAATTCTCAATATTCGCCGTACCCGCAAAGATACCCAACACCGCCAGGTTTACCGGCGTCTGGGCCCAATCATCGAACTGCCTACACAACGCACCAATATTCCGAACCAAATCGACCGTGGCCAGGCGGCTCATCACCTAGTCCTGGTCCCGGCCATCCATTGCCGCCTGCCTCACCGCATCATGCGCCGCTGCAGCAACCGCCAACGCCACATTCCGCTGGTGGCGGACCTCCACCCAGCAGCAGTCCAGGGCATGCGCCGAGTCCATCGCCGCAACCCTCGCAGGCATCACCATCGCCACACCAGGAGTTGATTGGACAAAACAGCAACGATAGTTCGAGTGGCGGTGCACATAGTGGCATGGGTTCTGGTCCACCGGGCACGCCGAATCCACAGCAAGTCATGAGGCCTACACCCTCGCCAACTGGCTCTTCGGGATCAAGATCAATGTCTCCTGCAGTGGCACAAAATCATCCAATCTCGCGTCCGGCGAGTAATCAGTCAAGCAGTGGGGGTCCAATGCAGCAACCAACTGTGGTCGCCGGCCCGCCACCGATGCCGCCACATGGTCTACCAGGTGGGCCACCATCTCAGCAGCAatctcagcagcaacaggctTCAAATTCAGCATCGTCAGCAAGCAATTCGCCACAGCAGACGCCACCACCAGCCCCGCCGCAAAaccaaaatgttaataatatgGCAACACCACCACCGCCGCAAGGGGCGACAGGTGGTTATCCCATTCCGCAGCATATGCATGGCCCCTACAAATTGGGTGGACCTGGACAAAGTCCCGGCGCTCAAGGATATCCACCACAACAATATCCGCAAGGAAATTACCCGCCACGCCCACAATATCCGTCGGGCGCGTATGCAACTGGGCCACCACCTCCGCCATCCAGCCAAGCCGCTGGCGGAGCCAACAACATGTCATCCAGCGCACAAACTGGCTACCCTCGTTCAATGCCCAACCACAGTGGTGGTAGCCCTCATCCACAGTATCCACCGTATCAGTGGGTGCCCCCATCGCCACAACAAACTGTGCCTGGTGTCGGTTCGGGACAAATTGGTGCTTCTATGGGTAATCATGTGCAAGGCAAAGGAACACCACCACCAGTGGGACCGCCTCCACCACAGGGCAGTGGCTCGCCACGCCAATTAAACTATCTGAAGCAGCATTTACAGCACAAAGGTGGATACGGTGCAAACCCAGCGGCACCACAGCCCCAAGGTTATGGAAATGGACCGACTGCCATGCATCCGGCAATGCCCATGGGTCCACCACATCATATGGGTCCACCGCATAGTATGGGACCACCTACCAGCACGCCGCCGCAATCAATGCTGGGTGCACAGGCAGGCAGCGACAGTGGCCCAGAGCATATATCCCAGGACAATGGCATCAGTTCATCAGGGCCGTCACCAGCCTCGGGATTGCATGCCGTTACCGCAGTAGTTACAACTGGCCCAGATGGTACACCAATGGATGAAGTTAGTCAACAGAGCACGCTCTCAAATGCTTCGGCTGCATCTGGCGAAGATCCACAATGTACAACACCAAAGTCGCGCAAACATGATCCATATAGCCAAAGTCATTTAGCACCGCCAAGCACTTCTCCACATCCCGTTGTTATGCATGGAGGGGGTGGTCCGTCTGGAGAGGAGTATGAAATGAGTTCACCACCTAATTGGCCACGTCCAGTTGCTAGTTCGCAGGTGCTCAACAGTCATGTTCCTGTTCAGCAAGAACCATTTCGGAGCACCATtacgacaacaaaaaagtcGGATTCGCTTTGCAAGCTATACGAGATGGATGACAATCCGGATAGGCGTGGTTGGCTAGACAAGCTGCGAGCCTTTATGGAGGAGCGTCGGACACCAATTACAGCGTGTCCGACCATCTCAAAACAGCCACTCGATTTATATAGGTTATACATTTATGTAAAAGAACGTGGCGGATTCGTCGAGGTGACCAAGAGCAAGACCTGGAAGGATATAGCTGGTCTGCTCGGAATCGGCGCTAGCAGCAGCGCTGCCTATACACTCCGCAAGCATTATACAAAGAATCTGTTGGCATTCGAGTGTCATTTTGATCGCGGCGACATCGATCCATTGCCCATTATACAGCAAGTTGAGGCCGGTAGCAAGAAAAAGACAACGAAAGCAGCATCTGTGCCATCACCAGGATCATCGAACTCACAGGATTCTTTTCCGGCACCACCTGGAAGTGCACCCAATACAACAATCGATGGATATACTGGCTACACAGGCGGTGGTGCCTATCCTACACCTTCCGGACCGCAACCGGATTATGGAGCAGCTGGACAAATGCAAAGGCCACCATCGCAAAGCAATCCCCAGGCACCTCATCCTGGCACACAAAATCAAACAGCcgccgctgttgttgccggTGATAACATAAATGTGAGCAATCCCTTTGAAGATCCAATTGCTGGCGGTGTGGCTGCtggtggtgttgctgctgctgcagctgctgcttctgctggtGGCGTTGGTGTTGGTGGTCCACCACATGGTGctccaccaccgccaccacatTCACCGCACACAGCGCCACAATCAAACAATCAACACCACCAACAAGGCATTCCAACACAATTGCCGCCACCGTCGCAGCAACCACCGGCGCCACCACCACAGCAACATGGTCCGCCATCGACGCAGCATGCTCGCCCTGCAACTGGAGTACCTTATCCACCAGGTAGCTCTGGGTATCCAACGCCTGTGTCTAGAACGCCAGGCTCACCGTATCCAACACAGCCTGGTGCTTATGGTCAATATGGTTCGGGCGATCAGTATAATGCCGCTGGGCCACCAGGACAACAATTTGGACCAAATCAGGGACAATATCCGCCGCAGAATCGCAATATGTACCCTCCCTATGGGCCAGAAGGGGAAGCCCCACCAGCTGGTGCTAATCAGTATGGTCCGTATGGAAATCGACCTTATAGTCAAGCACCACCTGGTGCACCGCAGCCCCCAGCGCAAGGCGGACCGCCAGGTGGACCGCCAGCCAGTGGGGCGCCAGTAGCACCACCAAATAGTGGTTATGCACCAAACACTCCCAACCAGCAGGATTATTATCGGCCGCCAGATCAAAGTCCTCAACCGCGACGACATCCTGACTTCATCAAAGACTCGCAGCCTTATTCAGGCTATACTGCGCGGCCTCAACTTTATGGTGGTTGGCAAGGTGGCAATCAACAGTATCGTGCTCAGTATCCCACATCGTCGGCGCCACAATCGTGGGGAAATGCACCACCACGGGGTGCAGCACCGCCTGGAGGTCCCCATGGTCCGCACGGTCAGCCGCCAGCAGGTGTCGCTCAGTGGGATCAACATCGTTACCCACCTCAGCAGCCTCCTCCGCcaccgcagcagcaacaaccgcCGTATCAGCAGGGCGCACCGCCtggtcagcaacaacagccgacGGCACCACAGTGGGCACAGATAAATGCAGTTCAACCGCCACCCCAGGCAAATATAGCGCAACCGGGATCAAACCTGCGTCCGCCACTTGGTGCTGCACAGCAGCAACGGTTGCCCAGCGGAGTGCCCGTCATGTCgccccagcagcaacagggaCAACCAGTGGCACAGCCACCACATGGAGGTGTTCCTACATCAAATATGCTACCAGTTGCTGGTGGATTAGCGAAACCGCCTTATGCTATGCCACCGCCGTCACAAGCTGGAGGCGTTCCACCTGGTGTGGCCATGGTTGGTACCCCACCTGGCAGCATGATTGCACAAAAGCAACCGCCAATTGTTGGACAGGGCATGCAGCCGGCGCAACAGCAGCCCCCTCATCAGCTGCCCAATCAGCAGGCTCCGTATGCTCCACAAGTAACTGGCGCCGGGGCACAGCTCGTGAAGAAGGAGCTAATCTTTCCACACGATAGCGTGGAATCAACAACACCAGTGCTATACCGACGAAAGCGCCTGACAAAGGCTGACGTCTGTCCCGTTGACCCGTGGAGGATCTTTATGGCTATGCGTTCGGGTCTTCTCACTGAATGCACATGGGCTTTGGATGTGCTGAATGTTCTGCTATTTGACGATGCCACCGTTCAGTTCTTTGGCATATCAAATTTGCCCGGCCTGTTAACCCTGCTGCTTGAACACTTTCAGAAAAATCTCGCCGAAATGTTTGATGAACGCTGCGAGGAGGCGATAGGCGATGAGGCAGATGATGATGCCGACAGTGGCACTGTCGTATCAGTGCAGGCTGAAGATCGCCTCAGGCGGAGACAGTCGCGTTGTGTACGGAGCATATGCAGCTATAATCGTAGACGACACTACGAGAATATGGATATTAAGCGCAGTGAAGATTCGGATGATGCCGATGAGGGCATCGATTTGGGTCAAGTGCGTGTCCAGCCAAATCCCGAAGAGCGAACGCTTCTCCTTTCGTTTACGCCTAATTATACTCTGGTCACGCGAAAGGGTGTCCCGGTTCGAATTCAAACTGCAGATCATGATATCTTTGTTGATGAGCGCCAAAAATCATGGGATATTGACACAAACAAATTGTACGAGCAGCTCGAACCAGTTGGCAGCAATGCCTGGACATATGGATTCACGGAACCCGATCCACTCGATGGCATTATCGATGTGTTCAAATCGGAAATTGTTAACATTCCATTTGCGCGATACGTACGTACGAAAAACAAGGGAAAGTCGCAGATTGCAGAGATTGCGGCGAAGAGAAACAATAGCCTTCGACCGGACGAGGATACCGTGGTCATCAAGCAGGAAGACACCACAACCAACAGCAGCACCGAAGATAGCAGTCTAATTCAGCAGACTTACAATAAAAAGCGTCGATTGGTGAGCAGTAGTGGTGGACCAGCCAGTGTTGATATTAAAAAGTCCAAACTGGAGGAGGAATTTGCGCAGCCAATCCTCGAGGTTAAGAAGGAGACAAGCACAGATGCCGCCCTGTGTGTGGGTGTCAGTTTAACGGACAGTGATTGCCGGGCCGTTGATATGGAGATTGAATTACCGCAGCAACAACGTCTGACCAATGGAGTCGCTACACAACCCAAGGGATTTGATCCCAAGTCAACTGTGCGCGATGTAGCACAAGTTCTGCAACGACGTCGTGACTCTAGCTACGAGGATGAATGTTACACGCGAGACGAGGCCTCATTATATTTGGTCAACGATAGCCAGGATTCGTTGGCACGTCGCTGTATTGCGCTCTCGAATATCTTTCGCAATTTGACCTTTGTGCCCGGCAATGAGACGGTGTTGGCCAAGTCGACACGATTTCTGGCCGTGCTCGGTCGCCTCCTCTTGCTTAACCACGATCATTTGCGACGCACGCCCAAGACCCGCAACTATGATCGAGAAGAGGATTCAGACTTTACCGACTCGTGCAGTTCATTGCAGGGTGAGCGGGAATGGTGGTGGGAATATTTAATTACCATTCGGGAAAATATGCTCGTGTCCATGGCCAACATAGCTGGACATTTGGAACTTTCGCGCTATGATGAATTAATCGCACGCCCGCTTATCGATGGACTGCTGCATTGGGCTGTCTGTCCCAGTGCCCATGGCCAGGATCCCTTTCCCTCATGTGGCCCCAATTCAGCGTTATCACCGCAACGCCTTGCCCTGGAAGCGCTCTGTAAATTGTGTGTTACAGATGCGAATGTCGATTTAGTGATTGCGACACCGCCCTTTTCACGCCTTGAGAAACTATGTGCGGTGCTGACGCGACATTTATGCAGGAACGAGGATCAAGTGCTGCGTGAATTTTCTGTCAATTTGCTGCATTATTTGGCCGCAGCAGACAGTGCCATGGCACGGACTGTGGCCCTGCAGTCGCCTTGCATTTCATATTTGGTTGCATTCATTGAACAGGCGGAGCAGACTGCATTAGGCGTGGCCAATCAGCATGGCATCAACTATCTGCGCGAGAATCCCGATTCGATGGGCACCAGCTTGGATATGTTACGACGAGCGGCCGGCACGTTATTGCATTTGGCCAAGCATCCAGATAATCGATCGCTGTTCATGCAACAGGAACAGCGATTACTTGGTCTGGTCATGTCGCATATACTGGATCAGCAGGTGGCATTGATTATATCAAGGGTGCTCTATCAAGTCTCGCGCGGCACTGGTCCGATGCACTCGGTTGAGTACAGATTGTTGCAGCagcgtcaacaacaacaacatcgctCCAATCTGTCTGCAACAGAAAAAACAATtgcgtcaacaacaacaacagcagcggcagcgacaacagcaacggccacaaccacaacaagtgCAGTGAAAACGGAACCCTGTGTGCAGCAAACAGCAGATCAGACTATCGATACtaagccaacagcaacagctgctgttgtcatGACGACAGCTGTGATCAAcgatgacaacagcaacagcagccaacaaTTGCCGCCAGCGGCAACCTTCAATGATGTTAGCAACAGCAgtaccaacagcaacagttgcggCACCGTCAGCAGCAATCAGactaacagcagcagcatggGCAGCAGTAGTCAGACAACACTTAACAATTTGGTAACACCaagcgaacaacaacaacaacagcagcagcagcagcagcaacaacaaccagttGGTAAATCCGCAACTGTAGCTgcaacaacgccaacaacaacatcggcaTTGTCTTCGAACAATTTGAGCAACATTAATGTCAATGCTGCTGCATCAACAACACCAAACTCAACACCTGCAACAGCTGTGGCGCCACAGACGGCGGCGCCACCGCCAACAAATGCCAATACAACCGCAGCCGTTGCGTAG
Protein Sequence
MNEKIKSPSAQGGSGGAGAAAGGGGAAGGNSAPSVAASAGGATPPTSGPPTPNNGNDPNIQQQAGTVPHPYGGPPPGTAPGAPPDPATVMSHYHHLHQQQQQQQPQHPQGPPLPPHMQHHGGPPPPQGPLPLPGAPEHTPGVKDEYGSAHLPPPPGVQHQHAHPAYARYHSGDPNMDPYRYGHAPTQQPPPGTKPPHQQQQQQQQQPQGAGGSPNRPPQQRYIPGQPPQGPTPTLNSLLQSSNPPPPPQHRYANNYDSQQVANAAAAAAAAQQQQQQQQQQQQQHQQNAQQQPAGPPPPLPGHGPPPPQHQPYGAQQGGWAPPPRPYSPQLGPSQQYRTPPPQSTSRGQSPYPSAHSQNSGSYPSSPQQQQQQQQQQQAQQQQAAQQSGGVGPPGAPPPPPGPSQQQQQQQNTPPNSQYSPYPQRYPTPPGLPASGPNHRTAYTTHQYSEPNRPWPGGSSPSPGPGHPLPPASPHHAPLQQPPTPHSAGGGPPPSSSPGHAPSPSPQPSQASPSPHQELIGQNSNDSSSGGAHSGMGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGGPMQQPTVVAGPPPMPPHGLPGGPPSQQQSQQQQASNSASSASNSPQQTPPPAPPQNQNVNNMATPPPPQGATGGYPIPQHMHGPYKLGGPGQSPGAQGYPPQQYPQGNYPPRPQYPSGAYATGPPPPPSSQAAGGANNMSSSAQTGYPRSMPNHSGGSPHPQYPPYQWVPPSPQQTVPGVGSGQIGASMGNHVQGKGTPPPVGPPPPQGSGSPRQLNYLKQHLQHKGGYGANPAAPQPQGYGNGPTAMHPAMPMGPPHHMGPPHSMGPPTSTPPQSMLGAQAGSDSGPEHISQDNGISSSGPSPASGLHAVTAVVTTGPDGTPMDEVSQQSTLSNASAASGEDPQCTTPKSRKHDPYSQSHLAPPSTSPHPVVMHGGGGPSGEEYEMSSPPNWPRPVASSQVLNSHVPVQQEPFRSTITTTKKSDSLCKLYEMDDNPDRRGWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGDIDPLPIIQQVEAGSKKKTTKAASVPSPGSSNSQDSFPAPPGSAPNTTIDGYTGYTGGGAYPTPSGPQPDYGAAGQMQRPPSQSNPQAPHPGTQNQTAAAVVAGDNINVSNPFEDPIAGGVAAGGVAAAAAAASAGGVGVGGPPHGAPPPPPHSPHTAPQSNNQHHQQGIPTQLPPPSQQPPAPPPQQHGPPSTQHARPATGVPYPPGSSGYPTPVSRTPGSPYPTQPGAYGQYGSGDQYNAAGPPGQQFGPNQGQYPPQNRNMYPPYGPEGEAPPAGANQYGPYGNRPYSQAPPGAPQPPAQGGPPGGPPASGAPVAPPNSGYAPNTPNQQDYYRPPDQSPQPRRHPDFIKDSQPYSGYTARPQLYGGWQGGNQQYRAQYPTSSAPQSWGNAPPRGAAPPGGPHGPHGQPPAGVAQWDQHRYPPQQPPPPPQQQQPPYQQGAPPGQQQQPTAPQWAQINAVQPPPQANIAQPGSNLRPPLGAAQQQRLPSGVPVMSPQQQQGQPVAQPPHGGVPTSNMLPVAGGLAKPPYAMPPPSQAGGVPPGVAMVGTPPGSMIAQKQPPIVGQGMQPAQQQPPHQLPNQQAPYAPQVTGAGAQLVKKELIFPHDSVESTTPVLYRRKRLTKADVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFDDATVQFFGISNLPGLLTLLLEHFQKNLAEMFDERCEEAIGDEADDDADSGTVVSVQAEDRLRRRQSRCVRSICSYNRRRHYENMDIKRSEDSDDADEGIDLGQVRVQPNPEERTLLLSFTPNYTLVTRKGVPVRIQTADHDIFVDERQKSWDIDTNKLYEQLEPVGSNAWTYGFTEPDPLDGIIDVFKSEIVNIPFARYVRTKNKGKSQIAEIAAKRNNSLRPDEDTVVIKQEDTTTNSSTEDSSLIQQTYNKKRRLVSSSGGPASVDIKKSKLEEEFAQPILEVKKETSTDAALCVGVSLTDSDCRAVDMEIELPQQQRLTNGVATQPKGFDPKSTVRDVAQVLQRRRDSSYEDECYTRDEASLYLVNDSQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHDHLRRTPKTRNYDREEDSDFTDSCSSLQGEREWWWEYLITIRENMLVSMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPFPSCGPNSALSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQVSRGTGPMHSVEYRLLQQRQQQQHRSNLSATEKTIASTTTTAAAATTATATTTTSAVKTEPCVQQTADQTIDTKPTATAAVVMTTAVINDDNSNSSQQLPPAATFNDVSNSSTNSNSCGTVSSNQTNSSSMGSSSQTTLNNLVTPSEQQQQQQQQQQQQQPVGKSATVAATTPTTTSALSSNNLSNINVNAAASTTPNSTPATAVAPQTAAPPPTNANTTAAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00512502;
90% Identity
iTF_00583459;
80% Identity
-