Basic Information

Gene Symbol
Xbp1
Assembly
GCA_004354385.1
Location
NW:7261859-7264355[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-15 1.7e-12 46.8 12.8 2 63 87 148 87 149 0.96
2 2 0.0015 1.2 8.8 3.1 35 61 141 167 140 170 0.89

Sequence Information

Coding Sequence
atggCACCTGCAAACGGAGTGCTGTTAACCAAGTGTGTGCCAATAGGCGcgagtttaaataatttgaatacaaatatGTTGCCCAAGTTGCGACCCGCCCCCCTTACAGCAGTGCTGCTAAAGGGCGGATCGTCGCCCTCCAGTTCGGGCTACGCATCCTCGTCAAACAGCGTGGCGGATGAGGAGTCAAGCACAATGGCCTCCAATGTCTCTGCACCCTTAAAGGCCAAGAAGCGGCGTCTGGATCATCTATCCTGGGAGGAGAAAGTACAGAGAAAGAAACTAAAGAATCGTGTTGCGGCACAAACGAGTCGCGACCGGAAGAAGGCACGCATGGAGGAAATGGAATATGAAATCAAAGAGCTAACTGAGAAATCGGAAATACTTCAGAACAAATGTGAGAGCTTGCAGAGCATCAATGAGTCACTGCTGGCTAAGAATCACAAACTGGACACGGAAGTGGAACTATTGCGTCAGGAACTCGCCGAAATGAAAGAGCTAGCCAAGAAGAAGAACAGCCAaagtcacagcaacaacagcaacaactgcgtCAATGCAAACGCTGATGGCTGTGCGTCCACACTCACTGGATGCAGCATCCAATGCTGACCCTCTGCAGCAGGGTACACAAGTGGACACACAGTCGTCAGCGCTTGCCTTGGCGCCGAAaatgttgcaacagcagctgaaacAGAGCAACACAACAGCCTCGCTCTGGAGAATTGTGGCGCTATGCCTTCTATACAAGACATGTTGCTCGTCGACGATGAAGAGTTCGATGCGCGGCGACTTGAAGAGCTGGCCGAGAGCCTGCTCGCAGATATCACAGCAGACCTGGAAACAGGCGGTGGCACATGCGACCAAGCTGCTGCCAAAGATGCAGGCGAGCCAGAGCGATTGTCTGGATCAGTGGTGGGGACCACAGCAGAGTGCATGGAATCCGGCGGAAATAGAGCTGTTGGCTTAATCGATGATGCAATTACGAAGCCGCCAATGCCCACTGAAAGAATcactaacaacaataacaatgataaCAGCCTGAGTATGCAGGTGTCACAGATAAATGGAAACCTACAAACCAAATCAAACCAATCAACCAagtcgacgacgacgacgaagacaacaactacaatttcAGCAGCTACATTTTTGCAGAGCACAACACCGGATACTGTGTATGGCACCTATGATGCCAAGACCAACTCCATCACCATTGTCATGGACGGCGATGCGGTGCCGGTCAATGAGGCCGTGGAGGTGATCTATGGCGATGGCGTTAGCGCTGGAGACGACACCACAGATGTGATCATGAAGTGTCCGCCGCCAGCGACATCGCCATCCCAGGTCTACCTCAATGTGATCAATGCCACCGAGGACTCGGATGATGAAACAACCAGTCATCTCAATTTCGAGCCCATTGAAAAATTCCTCTACCCGCGAGTTAAGGCCATCTCACCGCTGGCCAAGTCACCAGCGCAGTCCATGCATTCGGCCACTTCGGATCATGGCTATGAGTCAGTTATTGGCTCACCAACATCTACAGCGCTGGCGAATTTGGACACGGATACGACAATGCTCGCTGACGATGAGGATTTCCCCTGGGAGAGTAATTTCGATGAGCTATTCCCCAGTTTAATTTGA
Protein Sequence
MAPANGVLLTKCVPIGASLNNLNTNMLPKLRPAPLTAVLLKGGSSPSSSGYASSSNSVADEESSTMASNVSAPLKAKKRRLDHLSWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEYEIKELTEKSEILQNKCESLQSINESLLAKNHKLDTEVELLRQELAEMKELAKKKNSQSHSNNSNNCVNANADGCASTLTGCSIQC*PSAAGYTSGHTVVSACLGAENVATAAETEQHNSLALENCGAMPSIQDMLLVDDEEFDARRLEELAESLLADITADLETGGGTCDQAAAKDAGEPERLSGSVVGTTAECMESGGNRAVGLIDDAITKPPMPTERITNNNNNDNSLSMQVSQINGNLQTKSNQSTKSTTTTKTTTTISAATFLQSTTPDTVYGTYDAKTNSITIVMDGDAVPVNEAVEVIYGDGVSAGDDTTDVIMKCPPPATSPSQVYLNVINATEDSDDETTSHLNFEPIEKFLYPRVKAISPLAKSPAQSMHSATSDHGYESVIGSPTSTALANLDTDTTMLADDEDFPWESNFDELFPSLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00470613;
90% Identity
-
80% Identity
-