Basic Information

Insect: Drosophila infuscata
Gene Symbol: salm
Assembly: GCA_035042205.1
Location: JAWNLR010000426.1:1045330-1053189[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.5e-06 0.00018 21.9 1.7 1 23 365 387 365 387 0.98

2 8 3.5e-05 0.0025 18.3 3.5 1 23 393 415 393 415 0.98

3 8 2.4 1.7e+02 3.1 2.5 5 23 652 670 649 670 0.84

4 8 3.6e-08 2.6e-06 27.7 0.2 1 23 676 698 676 698 0.98

5 8 0.0011 0.078 13.6 0.9 1 23 708 730 708 730 0.98

6 8 0.054 3.9 8.2 0.1 2 23 935 957 935 957 0.96

7 8 1.2e-05 0.00085 19.8 5.0 1 23 1104 1126 1104 1126 0.96

8 8 9.3e-08 6.7e-06 26.4 0.7 1 23 1132 1154 1132 1154 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.5e-06	0.00018	21.9	1.7	1	23	365	387	365	387	0.98
2	8	3.5e-05	0.0025	18.3	3.5	1	23	393	415	393	415	0.98
3	8	2.4	1.7e+02	3.1	2.5	5	23	652	670	649	670	0.84
4	8	3.6e-08	2.6e-06	27.7	0.2	1	23	676	698	676	698	0.98
5	8	0.0011	0.078	13.6	0.9	1	23	708	730	708	730	0.98
6	8	0.054	3.9	8.2	0.1	2	23	935	957	935	957	0.96
7	8	1.2e-05	0.00085	19.8	5.0	1	23	1104	1126	1104	1126	0.96
8	8	9.3e-08	6.7e-06	26.4	0.7	1	23	1132	1154	1132	1154	0.98

Sequence Information

Coding Sequence: ATGTGTTCCATATTTCGCAATCGCATCAATTATCGGGGCACAGGAACGCGCAGTGGCGCCTCCAATGGAGGTGGAGGCGGAGGCGCAGGCGGGgtcagcagcaatagcagcaactcAGATCCCACCGGCGAACGGGAGAGTCTCCTGGCCAAGGAACTGAATGCggacagcaataacaatgcgtCGGATGAGACAATCGAGCCGGCATTGGAGatggagctgcagctggaaaaggagaaggagaagcagTCGGAGACTTCACTGCCCAGCTCCGAGCAGCCAGAGAACAGCAATGAGGCACTGGATCTGTCGGTCATTTCGGGCAATCGGTTGCCCAGCAGCGGGCATGTGGCACTAGAAGCTTTACAACATACCAAAGTGGCGGTGGCTCAGTTTGCGGCTACTGCGCTGGCGGCGGCATCCACGGATCCCAGCGATCTGGCCATGGTCCAGTCGACCATTTTCAATGTGCAGCGTCAGCATCTGATGCAGCTGCAACTCATCCAGCATCTACAGAGTCAATTGAAGCGGGCGGGGGGCGTGGTCGCCGCCCTCAGCCGGCAGTCGGGTCAAAACTATGCCGAGCAGGACGAAGATGAAGCGGCAGAGGAGGCAGAAGATGTGGAAGAGTTGGACGAGGAGCAGCAACTGTCGATGCCATCCAAAGAAACGTCGCGGGTGAACGGACAGCGAACCGAATTGGATCATGCAAGGCTGGAGGAGAGTTCAAAGACTGATGAAGAGTGCAATAGGCTGGCGGAGAGACCAAGGCGGGAAAGATCGCTGGAGACGACGAAGACACAGGCGGAGGCAGATGCTGAGGCGGAGGCTGAAGCCGAAGGCGAACAGGAGCTGGCCGAGAGCGAGTACAAGCCACTGATGTGCGACATCAGCTCCAGTCTGGCGGCCAGCATCATCACCAACCACGATCCGCCGCCGGCGCCCAACGAGCCCAACTGCCTCGAGATGTTGCAGCGTCGCACCGAGGAGGTGCTGGACTCAGCGTCTCAGAGCCTGCATGCCGCTCAGATGCAGGAGGAGTACTCGGAATATGCCTCCAAGGAGGCGCAGAGTCGCGGGGAGATCTTCAAGCATCGCTGCAAATATTGTGGCAAAATCTTTGGCAGCTATTCCGCTCTGCAAATCCACTTGCGTTCGCACACCGGCGAGCGACCCTTCCACTGCAACGTTTGCGGCAGCAAGTTCACCACCAAGGGCAATCTCAAGGTGCACTATCAGCGGCACACGCAGATCTTTCCGCCCATGCTGATGCCACCAGTGGTCAACGGGGTCAACGCACCCGAGCAATTTGCGGCAATTCGGCTGCCGTTTGTGGcacccacagcagcagcaccactgGCAGCACCcctgccaccaccaccaccaccacccccacccccgcCGCCAAGCAACGAGCAGCTGGAGGAGCCGGAGGCTCTTGGCCGACTGCAGCAGGCCGAGGATCTAAGCAAGCCGCCAGCGAGGGAACTGTCGCAATCGCCCGAGCAAGTCACGCAAACCAAGTCGCTTAGCGAAACAACCGCGCTGGTGTCGCCCGAGAAACAGGACAAGGACCAGGTCAAGGACAGTCCCAAGCCAACGACACCGCCAACGCCACCAGCTCCCTCGCCAACAACTCCAACGCCGGCAACCAGCAATCGTCGCAATGGCAGTGTTCGCAAGCGGCAGACCAGCCAGGCGGGAAGTCCGCCTGGTGAGGAGCATCCGCACGCAGAGCATCACTCGCACCTGGTCAAGTTGGTGCGTCGCTCCTCGGCGAGCCGGGATGGGATGACAGCGATGCCCGCCGAGTATTCATTGGCGCAGATGGAGCGTATTATTGACAAGTCGTGGGAGGATCTCATTGAGATCGACAAGACGTCGGAGACAtcgaagctgcagcagctggtcGATAACATTGAGAACAAGCTGACCGATCCCAATCAGTGCATCTTCTGCCAGAAGGTGATGTCCTGTCGCAGCTCCCTGCAGATGCACATACGCACTCATACCGGGGAGCGACCCTTTCGCTGCAAGATCTGCGGACGCGCCTTCGCCACCAAGGGCAACCTGAAGGCGCACATGAGCATCCACAAGATCAAGCCACCGATGCGCAGCCAGTTCAAGTGTCCGGTCTGCCATCAGAAGTTCTCCAACGGCATCATACTGCAGCAGCACATACGCATCCATACCATGGACGATGGCAGCGCTGGCCATgctcagctgcagcagctgcagggGCAGGTCGGCGATGTGGACCGATTGGGCATCGAGGATCAGAACTCGAACAAGTCGCTGGGCACCTCAGACACGCTGGACTTCTCGACGACCGTCTCGGATCATTCGGGTCAGCGATCGGAGTCGTCGCAGGGCGGCGACTTCGATGAGTTCATGACCATGGACAGCACCGATGATTCCCGTGACAATTCCTGCGCAGTGCTCGACAGGGAGCGAGATCGAGATGAGCGCTCCCGTTCGGACGATGTGGAGGGCAGCGGACGTGAGAGTGCCAGCGGTGAGATGCCCGCCATGGATCTGTCATCACCATCGCCATCGGCCACATCGCTGGCGCGTCTCTTTGGAGGCAACAGCGGTGcaggagtcggagtcggagttggagctgctactgctgctgccagttcAGGCGGTTTGCCCATGCTGCATGGCATGCCGATGCCACCGaatctgctgctgatggccGCGGCCAGGGAGGAGATGCATGCGCTGGGCCAGACGCATGCCAAGTTTCCGCTGCTGCCCTTCGGACCGCTCGGATTAATGGGACTGCAGCCGCCCCCAAATGTGTGCAATCTGTGCTTCAAGATGCTGCCCAGCCTGGCCGCCCTCGAGAGCCATCTGCAGAGCGAACATGCCAAAGAAGTGACGGCTCCTTCCGTTCGAGCCCACTGCAACGATGCGTTATCACCCTACGGTGCAAAGCTCACTCTCAATCCAAATCTGTTTGCCAAGAAGCCGAAACCGGCCACAGGGCTGGAGATGGCGCCTGCGGATCCAGTCACGCCATTGTCGGTACCCATTAAAGAGGAGCCCGAATCCGatcagccgcagcagctgcagcttccCGATGAGGGTGGCTGCGATAGTGGCACCAGTAGTGGCACTTCTGCAGCTGCCCAAGCTACGGCTGCCACTGGCTATCAGCATGAGTCTGCCGCCGATGCGGAGCAGTCCCTAATGAAGATGCAGTTGCATGCACATCGTTTTCCAGCCGGTCCGCTGGACTTTCAGCAGGCTCTGATGTCGGCGGGGCCGCCCAGCTCCAGCCTGGATCCGCCGGTGAATAACAAGCACTTCTGTCACGTCTGTCGTCGCAATTTCAGCTCCAGTTCGGCACTGCAGATTCACATGCGAACCCACACCGGAGATAAGCCGTTTCAGTGCAATGTGTGTCAGAAGGCCTTCACCACGAAGGGTAACCTTAAGGTTCACATGGGCACCCATATGTGGACGAATCCGACGTCGCGTCGCGGCCGTCGCATGTCCCTGGAGTTGCCGATGCGACCCGGTCCCGGCCCGGGCCCAGGTGTCCCACATGGTGTACCAACTGCTGAGCAGGAGTTCATGCAGAGACGCCCAGAACTCTTCTTCCCATATTTGCCACCCTTCTTCAACGGAATGCCACCAAAGCCCGGCGAATTGAGTCCTGGCGCTTTTGCCAACATACCTCCACCGCATTTTGCAAATGGAGCAAAGTATCCATATCCACCCGGTTTGCTCAGCTTTCCTGGATTTTtgggtgctgctggtggccaTCACCAGCATCCCTATGGCGGAGTGGAGCGGGGCAACAGCAAGTCACCCACATCGGAGCCGGCACAGAGTCCTGCATCCCGTGAGGATGACTCTGGTCTCAGTAATAACATCTGGCATCCACTGAGCAGCATTAAGATGGAGAGCAATCATAACGAGAGCGCTGGCAATCAGAGCGAGCAGGAACAGGAAgcggaacaggagcaggatcAGGAGGATTGTAAGAGCGTAGGCATCGATGCTGATGGCGAGCCTGAGGCGGATCCTGAGGATTCAGCTGAGAAGTAG
Protein Sequence: MCSIFRNRINYRGTGTRSGASNGGGGGGAGGVSSNSSNSDPTGERESLLAKELNADSNNNASDETIEPALEMELQLEKEKEKQSETSLPSSEQPENSNEALDLSVISGNRLPSSGHVALEALQHTKVAVAQFAATALAAASTDPSDLAMVQSTIFNVQRQHLMQLQLIQHLQSQLKRAGGVVAALSRQSGQNYAEQDEDEAAEEAEDVEELDEEQQLSMPSKETSRVNGQRTELDHARLEESSKTDEECNRLAERPRRERSLETTKTQAEADAEAEAEAEGEQELAESEYKPLMCDISSSLAASIITNHDPPPAPNEPNCLEMLQRRTEEVLDSASQSLHAAQMQEEYSEYASKEAQSRGEIFKHRCKYCGKIFGSYSALQIHLRSHTGERPFHCNVCGSKFTTKGNLKVHYQRHTQIFPPMLMPPVVNGVNAPEQFAAIRLPFVAPTAAAPLAAPLPPPPPPPPPPPPSNEQLEEPEALGRLQQAEDLSKPPARELSQSPEQVTQTKSLSETTALVSPEKQDKDQVKDSPKPTTPPTPPAPSPTTPTPATSNRRNGSVRKRQTSQAGSPPGEEHPHAEHHSHLVKLVRRSSASRDGMTAMPAEYSLAQMERIIDKSWEDLIEIDKTSETSKLQQLVDNIENKLTDPNQCIFCQKVMSCRSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPPMRSQFKCPVCHQKFSNGIILQQHIRIHTMDDGSAGHAQLQQLQGQVGDVDRLGIEDQNSNKSLGTSDTLDFSTTVSDHSGQRSESSQGGDFDEFMTMDSTDDSRDNSCAVLDRERDRDERSRSDDVEGSGRESASGEMPAMDLSSPSPSATSLARLFGGNSGAGVGVGVGAATAAASSGGLPMLHGMPMPPNLLLMAAAREEMHALGQTHAKFPLLPFGPLGLMGLQPPPNVCNLCFKMLPSLAALESHLQSEHAKEVTAPSVRAHCNDALSPYGAKLTLNPNLFAKKPKPATGLEMAPADPVTPLSVPIKEEPESDQPQQLQLPDEGGCDSGTSSGTSAAAQATAATGYQHESAADAEQSLMKMQLHAHRFPAGPLDFQQALMSAGPPSSSLDPPVNNKHFCHVCRRNFSSSSALQIHMRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTHMWTNPTSRRGRRMSLELPMRPGPGPGPGVPHGVPTAEQEFMQRRPELFFPYLPPFFNGMPPKPGELSPGAFANIPPPHFANGAKYPYPPGLLSFPGFLGAAGGHHQHPYGGVERGNSKSPTSEPAQSPASREDDSGLSNNIWHPLSSIKMESNHNESAGNQSEQEQEAEQEQDQEDCKSVGIDADGEPEADPEDSAEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00525326;
90% Identity: iTF_00514342;
80% Identity: -