Basic Information

Insect: Drosophila infuscata
Gene Symbol: -
Assembly: GCA_035042205.1
Location: JAWNLR010000082.1:1692178-1693935[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 5.3e-05 0.0039 17.7 5.3 1 23 291 313 291 313 0.98

2 8 8.3e-05 0.006 17.1 5.3 1 23 319 341 319 341 0.98

3 8 4.2e-05 0.003 18.0 1.6 1 23 347 369 347 369 0.98

4 8 3e-05 0.0022 18.5 2.6 1 23 375 397 375 397 0.99

5 8 1.7e-05 0.0013 19.2 0.4 1 23 403 425 403 425 0.97

6 8 1.6e-05 0.0011 19.4 0.2 1 23 431 453 431 453 0.98

7 8 1.5e-07 1.1e-05 25.7 0.8 1 23 459 481 459 481 0.98

8 8 4.4e-06 0.00032 21.1 2.0 1 23 487 509 487 509 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	5.3e-05	0.0039	17.7	5.3	1	23	291	313	291	313	0.98
2	8	8.3e-05	0.006	17.1	5.3	1	23	319	341	319	341	0.98
3	8	4.2e-05	0.003	18.0	1.6	1	23	347	369	347	369	0.98
4	8	3e-05	0.0022	18.5	2.6	1	23	375	397	375	397	0.99
5	8	1.7e-05	0.0013	19.2	0.4	1	23	403	425	403	425	0.97
6	8	1.6e-05	0.0011	19.4	0.2	1	23	431	453	431	453	0.98
7	8	1.5e-07	1.1e-05	25.7	0.8	1	23	459	481	459	481	0.98
8	8	4.4e-06	0.00032	21.1	2.0	1	23	487	509	487	509	0.99

Sequence Information

Coding Sequence: ATGagcggcggtggcggcagcagcagcaagtcgGGCGTTGTTCTCAATTGCCGCACTTGCACCCGAGCATGTAAACTATATAAGTCGCTCCAAGATGAAATTCAGATCGGTCCAGAAGGCACCACCACCTTATCGCACATGCTCAACTATTTCTCGAATCTATCATTTGAGCCTCATGATGGCGACTCAATGCCCCAgcatatttgtatgcattgCCTGCAGCTGTTGGAGCAGGCGTTTAATTTTAAGCGCATGATCATCGATTCCGATGAACTACTCCGTCTAGGTCTCGAGGAAGTCGACAGCGTGGGTAATCCCAGTCCCAATGACGATAACAACCAGGAGTATGTAGTGATCGAGCTGCTCGGCGATCAGAACAATACCGACTCTGTGGCCAAAACGAATGCCTCAACGCACGTCGAGGCGTGCTGTGAAGAGGAAAAGGATATGGAACCAGAGACGGAACAAGATGAATTTATTGTCGATAATCCGGATTTGGATGCATATGTTGAGACAGAGGATGCACTCGATTTCCAAACAACAGACATTGAGTATGTGACAATCAAAGCAGAATACGACTCGCAAGTTGATGAAGAGGATGATATCGAGATTATGGACTCGCCTGTCATCGAAACGGCCAGCGATCAAATGCAAATCCAAATGCTTGACGACCACATGGTCATCCTGTCCGGCGAGGAACACATCGATGAGGTAATTGGCGAAGTCGAAGCCGACGATATACTGGACATCGAACGCGAGGAGCATTTgCTAACTGGTGAAAGCGACGAGGGTGAGGAATTTCTGGATGAGTCAATGGCCGATGAGGGATCGCTACTGGTTGTCACTGGAAATGGCGGCGAGGTCCTGCCCCATGTGTGTAATGTATGCAACAAGGCGTTTCGACAGCAGTGCCGTCTCAATCAGCATTTGCGCTCTCATGTGGACGAGAAACTGCACAAGTGCGAGGAGTGTGGGAAGAAGCTGAAACACTTGCGCAACTACAAGGAGCACATGCTGACGCACACGAACGTTAAGCCGCATCAGTGTTTGGTGTGTGCTCGCTTCTATCGCACCACATCCAGTTTGGCTGCCCACATGCGAACCCATGCCGAGGACAAGCCGTACAAGTGTGATCAGTGCGGACGGAGCTATGCGGCCTTCGATCATCTGCGACGGCACAAGCTGACGCACACCGGCGAGCGACCGTATGCGTGCGATCTGTGTGATAAGGCCTACTATGACTCGTCGTCGCTGCGACAGCACAAAATTAGCCATACTGGCGAAAAGGCGTTTACCTGCGAAATCTGCGGTGTTGGCCTCTCACAAAAATCGGGCTACAAGAAGCACATGCTGGTGCATTCCGGCGAAAAGCCGCACAAATGCCCTATCTGTGGGCGTGCCTTCACCTTCACCAGTAACCTTAACGCCCATGTTCGGCTGCACTCCGGCGAGAAGCCATTCAAGTGCGACAAATGCACAAAGGCATTTCCAACGAAAAAGCGCCTCAACAGCCATCTGCGTGTGCACAATAAGGAGGCGCCCGTCACGACAaccagcaacatcatcagccCCGGCTCCAATGGTCAGTCGGAACGGGCCGCACTGGTTGCAGCCGGCCGTCGGGGAGCCAACAATATGACCGATGGCATGGACCATCCGGTATCCACATCCAAGGTGGTTGTGGTTCTATAA
Protein Sequence: MSGGGGSSSKSGVVLNCRTCTRACKLYKSLQDEIQIGPEGTTTLSHMLNYFSNLSFEPHDGDSMPQHICMHCLQLLEQAFNFKRMIIDSDELLRLGLEEVDSVGNPSPNDDNNQEYVVIELLGDQNNTDSVAKTNASTHVEACCEEEKDMEPETEQDEFIVDNPDLDAYVETEDALDFQTTDIEYVTIKAEYDSQVDEEDDIEIMDSPVIETASDQMQIQMLDDHMVILSGEEHIDEVIGEVEADDILDIEREEHLLTGESDEGEEFLDESMADEGSLLVVTGNGGEVLPHVCNVCNKAFRQQCRLNQHLRSHVDEKLHKCEECGKKLKHLRNYKEHMLTHTNVKPHQCLVCARFYRTTSSLAAHMRTHAEDKPYKCDQCGRSYAAFDHLRRHKLTHTGERPYACDLCDKAYYDSSSLRQHKISHTGEKAFTCEICGVGLSQKSGYKKHMLVHSGEKPHKCPICGRAFTFTSNLNAHVRLHSGEKPFKCDKCTKAFPTKKRLNSHLRVHNKEAPVTTTSNIISPGSNGQSERAALVAAGRRGANNMTDGMDHPVSTSKVVVVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00570552;
90% Identity: iTF_00548977;
80% Identity: -