Basic Information

Insect: Drosophila infuscata
Gene Symbol: -
Assembly: GCA_035042205.1
Location: JAWNLR010000915.1:2168766-2173303[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.001 0.073 13.7 1.0 1 23 212 234 212 234 0.97

2 26 0.00038 0.028 15.0 4.1 1 23 240 262 240 262 0.98

3 26 0.02 1.4 9.6 0.7 2 23 295 316 294 316 0.96

4 26 0.015 1.1 10.0 3.3 1 23 391 414 391 414 0.93

5 26 0.11 7.7 7.3 0.7 2 22 424 444 423 444 0.96

6 26 4.2 3.1e+02 2.3 0.4 1 19 453 471 453 473 0.91

7 26 0.77 56 4.6 0.6 2 23 500 521 499 521 0.96

8 26 0.007 0.5 11.0 0.4 1 23 595 618 595 618 0.96

9 26 0.0081 0.59 10.8 0.1 1 22 627 648 627 648 0.95

10 26 0.0055 0.4 11.4 2.9 1 23 657 680 657 680 0.97

11 26 6.5e-05 0.0047 17.4 0.4 2 23 694 715 693 715 0.97

12 26 1.4e-05 0.001 19.5 5.2 1 23 721 743 721 743 0.98

13 26 0.12 8.5 7.2 1.0 1 23 882 905 882 905 0.95

14 26 0.0049 0.36 11.5 2.2 1 22 912 933 912 933 0.96

15 26 0.29 21 5.9 0.7 1 23 942 965 942 965 0.88

16 26 5.9e-05 0.0043 17.6 1.6 1 23 989 1011 989 1011 0.97

17 26 0.00045 0.032 14.8 0.7 1 23 1018 1040 1018 1040 0.98

18 26 0.015 1.1 10.0 0.0 2 21 1067 1086 1066 1087 0.94

19 26 0.039 2.9 8.7 4.0 1 23 1132 1155 1132 1155 0.96

20 26 0.0067 0.49 11.1 1.5 1 23 1192 1215 1192 1215 0.96

21 26 0.014 1 10.1 3.1 1 23 1242 1265 1242 1265 0.97

22 26 1.4e-05 0.00099 19.6 0.1 2 23 1286 1307 1285 1307 0.95

23 26 4.6e-05 0.0034 17.9 2.9 1 23 1313 1335 1313 1335 0.99

24 26 4.2e-06 0.00031 21.2 2.3 1 23 1341 1363 1341 1363 0.97

25 26 2.9e-07 2.1e-05 24.8 2.6 1 23 1369 1391 1369 1391 0.99

26 26 0.00069 0.05 14.2 0.3 1 21 1397 1417 1397 1421 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.001	0.073	13.7	1.0	1	23	212	234	212	234	0.97
2	26	0.00038	0.028	15.0	4.1	1	23	240	262	240	262	0.98
3	26	0.02	1.4	9.6	0.7	2	23	295	316	294	316	0.96
4	26	0.015	1.1	10.0	3.3	1	23	391	414	391	414	0.93
5	26	0.11	7.7	7.3	0.7	2	22	424	444	423	444	0.96
6	26	4.2	3.1e+02	2.3	0.4	1	19	453	471	453	473	0.91
7	26	0.77	56	4.6	0.6	2	23	500	521	499	521	0.96
8	26	0.007	0.5	11.0	0.4	1	23	595	618	595	618	0.96
9	26	0.0081	0.59	10.8	0.1	1	22	627	648	627	648	0.95
10	26	0.0055	0.4	11.4	2.9	1	23	657	680	657	680	0.97
11	26	6.5e-05	0.0047	17.4	0.4	2	23	694	715	693	715	0.97
12	26	1.4e-05	0.001	19.5	5.2	1	23	721	743	721	743	0.98
13	26	0.12	8.5	7.2	1.0	1	23	882	905	882	905	0.95
14	26	0.0049	0.36	11.5	2.2	1	22	912	933	912	933	0.96
15	26	0.29	21	5.9	0.7	1	23	942	965	942	965	0.88
16	26	5.9e-05	0.0043	17.6	1.6	1	23	989	1011	989	1011	0.97
17	26	0.00045	0.032	14.8	0.7	1	23	1018	1040	1018	1040	0.98
18	26	0.015	1.1	10.0	0.0	2	21	1067	1086	1066	1087	0.94
19	26	0.039	2.9	8.7	4.0	1	23	1132	1155	1132	1155	0.96
20	26	0.0067	0.49	11.1	1.5	1	23	1192	1215	1192	1215	0.96
21	26	0.014	1	10.1	3.1	1	23	1242	1265	1242	1265	0.97
22	26	1.4e-05	0.00099	19.6	0.1	2	23	1286	1307	1285	1307	0.95
23	26	4.6e-05	0.0034	17.9	2.9	1	23	1313	1335	1313	1335	0.99
24	26	4.2e-06	0.00031	21.2	2.3	1	23	1341	1363	1341	1363	0.97
25	26	2.9e-07	2.1e-05	24.8	2.6	1	23	1369	1391	1369	1391	0.99
26	26	0.00069	0.05	14.2	0.3	1	21	1397	1417	1397	1421	0.91

Sequence Information

Coding Sequence: atgttgcCGACGAATGTTTGTCGCACGTGTGCGCTCCAAGATGACAACTTGTTTGCACTGGCAACTCGGAGTGAGAAATACgcaaataaaagtatttgcGACTTGCTGCACGAACTAACACAAAACGATCCACTGCTGGAGCATACATATGATAAGCTACCGCAGCACTTGTGCGGTCAATGCTTGAGCCAGTTGGAAGCTGCTTATGCATTTGTGTTGCAGGTTCGCGTGGCGCaggagcaactgttgctgcagctaCGTAATGGATTGCAGACACAGTGCCTGGACGAAACACCCATCGATATAAGCGTAGAACACATCAAAATCGAAACAGACATTGACCTAGATGCGGGCACGGCTGATGCAGTCGATGCTGAATTGGAGGATGAGCAGGAGAAGCAGGTTGTCTTAAAATGTCAGCCGGAAACTGATAGCGACAGCAGTCAGGTTATTTTGAAAGACGTTGATGTCAAAACCGCGCAGCTGAGGCGTAGCGCACGGCGAGCCAAACTGAGCACAGACAGCGAAAATGATTCAATCTCCGAGCAGGTGAAGCCGTTGCCTGTTAAGCGTGGACGCGGTCGTCCCGCACGTCTAGCCAAGAGGGAGACGACCACCAACAAGGATGGGCGACATGTATGCGAGGTATGCGGCAAGACCTTCTCCTGGTTTCGCGACATGCAGCGCCATGCGCGCATCCACTCCGAGCAGGCGGGATTTGTGTGCGAGCACTGTGGCAAGAAGTTTCTGCGCAAGGACAAGTACATGACCCATCTGCGATCGCACAAGAAGCACGTGGCCGCAGATAAACAGACACTGCCACGGAGCGGCGAGTGGCGCTACGCGGAGCGTCTATACAGCTCTGGCAGATTAATGCGTGTGGAGTGCAAACTGTGCGGTTTGAGTTGCCAGCGCATTCGGGAGCTGCGCGAGCACCTGGCGAGTCATGTTCACATTGAGACATTGGTGAATCTCAGCATGGACAACGATGTCATCCGGGAGCATTTTGGAAGCCAATTGGATATGCAGGAAATCAAGGAACAGGTGTGCACGCAAATTGCCAAAGGTCGCGAGCAACTGGAGAATTACGGCGCTGTGGTGAATGCCTACGGCTATGAGCTGTGCCTCAGCGACTCAGATGAGGAGGACGATGAGGAGCTGGCTGACAAATATCATTGTCTGCGCTGCAATGTTAACTTTGCACGCAAGCATCAACTCGTCCGTCACACGCTCGAGGAGCACACGGACGGAAGTGAGACTCCTTTGGATCGCTGCAATATCTGTCAAATTGGCTTTGTTTGCTCCAAGCTGCTGGAGCAGCATCAGCGCACGCAGTGCCTGAATCCGCTGAAGCGTTACAGTTGCGAGAATTGTCCTGGCAAGTTTATTTGGCTGCAGAATCTGCAGCAGCATGCATGCTGCAGACTGCAACAGGATCTGCAGCAGGAACTGCAGCATTGGcatcaggagcagcagcaggcacctCATCGCCAGATCCAATGTTGTCTGTGCAATAACCAACTTGCCAGCATGGCTGCTCTACGATCTCATTTACTCACGCATCGCGATGGACACACGGACATCGATCCACACCAACAGTCTCCTTTCTTTCGCACCTATAACCAGGATGACAGCGCCAGCAGCCTGTCGGAAATCAGGGCACGCATCGCTGGCGACTTTGAGGCGCAGCTTTATGGAAGATATTTTAATGCGTGCACTGACAGCGGACAGGAACTGGACTTCAACGACTCCGACAAGGAGTGGAGCGATGCGCCCGCTCTGCACAGCTGTGCCGTGTGTGGCGAGAGTAGAATCCGCCTCGATCAACTCCTCCAGCATCAGCTGAGCCAGCACATTGAACTGGCGAGCGGAATGCCTCATGTTTGCTCAGATTGTGGATTGGGCTATGTGGCAGAGTCTCTGCTAAAGCAGCATCGTCGTCGGATCTGCGCTAAGTTGCATGCCAAGTACCAGTGTCTACATTGCAGTCAGCGCTTTTATTGGAATTCCAACTACGAGCGCCACATTCAGGTGCAACATTCTGCGGATAGGCACCAGGAGCAGGAGAAGAGCAAGCTGCAGTGTAGCGAGTGCGATAAGGTGTTCATCTGGCCCAAGGATTTGACGCGCCACAAGCGCATGCATCAGTCACAGGTGCAGTTCGAATGCGCACACTGCGATCGCAAGTTTCATCGCAAGGATGGCCTCAAGTCGCACATGCGGATGCACGGTGAGCTGCCGACGTCATCTCTCgttgagcaactgcagcgCCTGCCGATGGTCTTGGGCCAGCTGTGTCGCCCCAATGGCTGCAAGCAGATCAAGTGCATGATTTGTCTGTCCCAGCACACAAAGATCTCCGATTTGCGTACGCACTTGACTAGCCATCAGTTGACCCTATGTTTGGCCGAGGAGCGAGGCATCACAAACATTTGTCGAGCTATCTATCCGGAGTTGAACACGCCATTGGATCAGCAGGCATTGATCACGCGCATCCAACGTGATCTGGCCAATGACCGGGAGCTGGAGAGATTTGTTTCGATAACCAACGAGGCGGGCATCGAACTAAGCCTGGACAGCAGCGAAACGGACACGGATTCGGATTGTGCAGCAGATACCGATCGGAGCAGCATGGAACGCCGTTACAGCTGTGAACTGTGCCAGGTGCAGGTGATGCGCAAACATCAGCTCTATGCCCACcagctggagcagcacacGTGGCACCGGACGACGCACGTCTGTAGCCACTGCCAGGCGAGATTCGTGAATGAGCAGCTGCTGGAGCATCACTATCGCACCCTCTGCCGCAATTCCCAGCGGCGTTTCTTGTGTCGCAAGTGTCCGTTGCGCTTTCGCTGGCGCGATAATCTCAAGCTGCATAATACTGTAGCGCATCAGGAGCAAGGGAATGTCGAACAGCAGTCCAATGTGGACATTCAGTTGCGTATGCTGCCCGTGGTTAGCTACGACTGTGTCGAGTGCAAGCGTAGcttcaaaatgcaaaaggaTCTCACACGGCACACCCTGATGCATGCCCAGGAGTCGAGCATCTATCGGTGTCGCTGGTGCGCTCGACGCTTCTATCGGGAGGCGAATCTGCTGCAGCACATCGAGCGCCATGGAATCAGCGCCGACCAGCTGCCCTATGCGGAGGCCCTGCTCAACGCCAGTCGTCATCCGCACGGCTCGAAGTGTATTCAGTGTCGCGTGTGTGAATTATCCTTTAGCAGCATTGCGGCACTGCGATCCCACCTACAATCGTCGCCAGTTGGCACCCATCATCCGATTGAGTCCATGGCCAACTATTCTATCACCAATCAGCTGGGCTATGAGCTGCACCTGGATGATTCCGAAACGGATGAGGAAGCCAAGCCGGGAGGCACTCCGGCGCATTACACGTGCGGCATGTGCCAGCTGCGCTGTGTGCGCAAATTTGAactgcatcagcatcagcaggcCATGCATCGTCTGGAGCGCATCGCCGACGGCTGTGATCTGTGCATCTTCAAGAGCGTCTCACCCGATCTGATTGCCTATCATCGGCGTGTGCTGTGCGAAAACACGGAGAAGCAGTTCAAGTGCTCTAAATGCAGCTACAAGTTCATGTGGCAATCGAATCTGGTACAACATATCCAACTGCAGCATCCCAGCAGCGATGAGTCgacatcaaaaacaacaatgaccATGCCCGTGGCCGACATTGACAACGTCGAGAGCACTGTCTTCCAGTGTGGTCAGTGTCCAAGTAAATACAATCGCAAGGATCGCCTCACCGCCCATGTGAAAAAGTGTCACACAGCTGGCGCAACTGCGTCAACAAAATCGCCAGCTGTTGCCAAGCAGCAGAAGAGTTTTCTGTGTGCCTTCTGCGGCAAGGCGGTGAGCTCATCCTCCAATTTAATCATACACATACGTCGGCACACCGGCGAGAAGCCGTTTAAGTGTGATTACTGCGACATGGCCTTTCCGCGCTCCTCAGATCTCCAGTGCCATCGACGCACCCACACCGGCGAAAGGCCTCACATTTGCACCGTCTGCAAGAAGGGTTTCGCTCGCTCCTACAAGCTACAGCAGCACATGCGCATCCACAACGGCGAACGGCCCTACAAGTGCACCTTCTGCGACAAGAGCTTCACCCAGTCCAATGACCTCACTCTCCACATCCGACGCCACACGGGCGAGCGTCCTTATCAGTGCAATACTTGCGGCGAGCGATTCATTCAAGGCACCGCGCTCAAGAATCATCGACTGCAGAATGGCCACTATGAGACGGAAGTGGATCAATCGAAAGATGACTAA
Protein Sequence: MLPTNVCRTCALQDDNLFALATRSEKYANKSICDLLHELTQNDPLLEHTYDKLPQHLCGQCLSQLEAAYAFVLQVRVAQEQLLLQLRNGLQTQCLDETPIDISVEHIKIETDIDLDAGTADAVDAELEDEQEKQVVLKCQPETDSDSSQVILKDVDVKTAQLRRSARRAKLSTDSENDSISEQVKPLPVKRGRGRPARLAKRETTTNKDGRHVCEVCGKTFSWFRDMQRHARIHSEQAGFVCEHCGKKFLRKDKYMTHLRSHKKHVAADKQTLPRSGEWRYAERLYSSGRLMRVECKLCGLSCQRIRELREHLASHVHIETLVNLSMDNDVIREHFGSQLDMQEIKEQVCTQIAKGREQLENYGAVVNAYGYELCLSDSDEEDDEELADKYHCLRCNVNFARKHQLVRHTLEEHTDGSETPLDRCNICQIGFVCSKLLEQHQRTQCLNPLKRYSCENCPGKFIWLQNLQQHACCRLQQDLQQELQHWHQEQQQAPHRQIQCCLCNNQLASMAALRSHLLTHRDGHTDIDPHQQSPFFRTYNQDDSASSLSEIRARIAGDFEAQLYGRYFNACTDSGQELDFNDSDKEWSDAPALHSCAVCGESRIRLDQLLQHQLSQHIELASGMPHVCSDCGLGYVAESLLKQHRRRICAKLHAKYQCLHCSQRFYWNSNYERHIQVQHSADRHQEQEKSKLQCSECDKVFIWPKDLTRHKRMHQSQVQFECAHCDRKFHRKDGLKSHMRMHGELPTSSLVEQLQRLPMVLGQLCRPNGCKQIKCMICLSQHTKISDLRTHLTSHQLTLCLAEERGITNICRAIYPELNTPLDQQALITRIQRDLANDRELERFVSITNEAGIELSLDSSETDTDSDCAADTDRSSMERRYSCELCQVQVMRKHQLYAHQLEQHTWHRTTHVCSHCQARFVNEQLLEHHYRTLCRNSQRRFLCRKCPLRFRWRDNLKLHNTVAHQEQGNVEQQSNVDIQLRMLPVVSYDCVECKRSFKMQKDLTRHTLMHAQESSIYRCRWCARRFYREANLLQHIERHGISADQLPYAEALLNASRHPHGSKCIQCRVCELSFSSIAALRSHLQSSPVGTHHPIESMANYSITNQLGYELHLDDSETDEEAKPGGTPAHYTCGMCQLRCVRKFELHQHQQAMHRLERIADGCDLCIFKSVSPDLIAYHRRVLCENTEKQFKCSKCSYKFMWQSNLVQHIQLQHPSSDESTSKTTMTMPVADIDNVESTVFQCGQCPSKYNRKDRLTAHVKKCHTAGATASTKSPAVAKQQKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDYCDMAFPRSSDLQCHRRTHTGERPHICTVCKKGFARSYKLQQHMRIHNGERPYKCTFCDKSFTQSNDLTLHIRRHTGERPYQCNTCGERFIQGTALKNHRLQNGHYETEVDQSKDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00577186;
90% Identity: iTF_00610043;
80% Identity: -