Basic Information

Insect: Drosophila incognita
Gene Symbol: -
Assembly: GCA_035042225.1
Location: JAWNLQ010000284.1:2187203-2191695[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00055 0.036 14.6 0.9 1 23 207 229 207 229 0.97

2 26 0.00065 0.043 14.4 2.8 2 23 236 257 235 257 0.97

3 26 0.017 1.1 9.9 0.8 2 23 288 309 287 309 0.96

4 26 0.0068 0.45 11.1 2.4 1 23 384 407 384 407 0.94

5 26 0.21 14 6.4 0.6 2 22 417 437 417 437 0.96

6 26 3.1 2.1e+02 2.8 0.4 1 20 446 465 446 467 0.91

7 26 1.1 70 4.2 0.6 2 23 493 514 492 514 0.96

8 26 0.0046 0.3 11.7 0.8 1 23 588 611 588 611 0.96

9 26 0.028 1.9 9.2 0.3 1 22 620 641 620 641 0.95

10 26 0.0033 0.22 12.1 4.3 1 23 650 673 650 673 0.97

11 26 0.00011 0.0071 16.8 0.9 2 23 687 708 686 708 0.97

12 26 2.2e-05 0.0014 19.0 5.4 1 23 714 736 714 736 0.98

13 26 0.15 9.6 7.0 1.3 1 23 872 895 872 895 0.95

14 26 0.03 1.9 9.1 2.2 1 22 902 923 902 923 0.95

15 26 0.6 39 5.0 0.3 1 22 932 953 932 955 0.85

16 26 6.2e-05 0.0041 17.6 1.6 1 23 979 1001 979 1001 0.97

17 26 0.00017 0.011 16.2 1.1 1 23 1008 1030 1008 1030 0.98

18 26 0.13 8.4 7.1 0.0 2 21 1057 1076 1056 1077 0.94

19 26 0.041 2.7 8.7 4.0 1 23 1122 1145 1122 1145 0.96

20 26 0.007 0.46 11.1 1.5 1 23 1182 1205 1182 1205 0.96

21 26 0.015 0.98 10.1 3.1 1 23 1227 1250 1227 1250 0.97

22 26 1.4e-05 0.00093 19.6 0.1 2 23 1271 1292 1270 1292 0.95

23 26 4.8e-05 0.0032 17.9 2.9 1 23 1298 1320 1298 1320 0.99

24 26 3.5e-06 0.00023 21.5 3.4 1 23 1326 1348 1326 1348 0.97

25 26 4.1e-07 2.7e-05 24.4 2.9 1 23 1354 1376 1354 1376 0.99

26 26 0.0019 0.12 12.9 0.4 1 22 1382 1403 1382 1406 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00055	0.036	14.6	0.9	1	23	207	229	207	229	0.97
2	26	0.00065	0.043	14.4	2.8	2	23	236	257	235	257	0.97
3	26	0.017	1.1	9.9	0.8	2	23	288	309	287	309	0.96
4	26	0.0068	0.45	11.1	2.4	1	23	384	407	384	407	0.94
5	26	0.21	14	6.4	0.6	2	22	417	437	417	437	0.96
6	26	3.1	2.1e+02	2.8	0.4	1	20	446	465	446	467	0.91
7	26	1.1	70	4.2	0.6	2	23	493	514	492	514	0.96
8	26	0.0046	0.3	11.7	0.8	1	23	588	611	588	611	0.96
9	26	0.028	1.9	9.2	0.3	1	22	620	641	620	641	0.95
10	26	0.0033	0.22	12.1	4.3	1	23	650	673	650	673	0.97
11	26	0.00011	0.0071	16.8	0.9	2	23	687	708	686	708	0.97
12	26	2.2e-05	0.0014	19.0	5.4	1	23	714	736	714	736	0.98
13	26	0.15	9.6	7.0	1.3	1	23	872	895	872	895	0.95
14	26	0.03	1.9	9.1	2.2	1	22	902	923	902	923	0.95
15	26	0.6	39	5.0	0.3	1	22	932	953	932	955	0.85
16	26	6.2e-05	0.0041	17.6	1.6	1	23	979	1001	979	1001	0.97
17	26	0.00017	0.011	16.2	1.1	1	23	1008	1030	1008	1030	0.98
18	26	0.13	8.4	7.1	0.0	2	21	1057	1076	1056	1077	0.94
19	26	0.041	2.7	8.7	4.0	1	23	1122	1145	1122	1145	0.96
20	26	0.007	0.46	11.1	1.5	1	23	1182	1205	1182	1205	0.96
21	26	0.015	0.98	10.1	3.1	1	23	1227	1250	1227	1250	0.97
22	26	1.4e-05	0.00093	19.6	0.1	2	23	1271	1292	1270	1292	0.95
23	26	4.8e-05	0.0032	17.9	2.9	1	23	1298	1320	1298	1320	0.99
24	26	3.5e-06	0.00023	21.5	3.4	1	23	1326	1348	1326	1348	0.97
25	26	4.1e-07	2.7e-05	24.4	2.9	1	23	1354	1376	1354	1376	0.99
26	26	0.0019	0.12	12.9	0.4	1	22	1382	1403	1382	1406	0.91

Sequence Information

Coding Sequence: atgttgCCGACGAATGTTTGTCGCACGTGTGCGCTGCAAGATGACAACTTGTTGGCGCTGGCAACGCGTAGTGAGAAATTCGCAAAGAAAAGTATCTGCGAAATGCTGCACGAATTAACACAAAACGATCCACTGCTGGAGCATATAGATGATAAGCTACCGCAGCATTTGTGCGGCCAATGCTTGAGCCAGCTGGAAGCAGCTTATGCATTTGTGCTGCAAGCCCGCGAGGCGCaggagcaactgttgctgcagctacGCAAAGGATTGCAGACACAGTGCCTGGACGAAACACCTATCGATATAAGCATAGAACACATCAAAATCGAAACAGACATTGACCTAGATGCGGACACGGCTGACGCAGTTGATGCTGAGTTTGATGAGGAGCGGGGGAAGCTGGAAACTGATAGCGATAGCAGTCAGGATAATGTGAAGGACCATGATGTTGAGGTTCAAACCCTGCAGCTGCGGCGCAGTGCTCGGCGAGCCAAACTGAGCACAGACAGCGAAAATGAGTCAATCTCCGAGCAGGTGCAGCCGTTGCCCGTTAAACGTGGACGCGGTCGTCCCCGACGTGTGGCCAAGATGGAGACAACCACCAACGAGGATGGGCGGCATGTGTGCGAGGTGTGCGGCAAGACCTTCTCCTGGTATCGCGACATGCAGCGCCATGCACGCATCCACTTCGAGCAGGCGGGCATTGTGTGCGAGCACTGCGGCAAGAAGTTCCTGCGCAAGGACAAGTACATGACCCATCTGCGATCACACACAAATTACGTGGCCACAGATAGACTGCCACGGAGCAGCGAGTGGCGCTACGCAGAGCGTCTATACAGCTCCGGCAGATTAATGCGTGTGGAGTGCAAACTGTGCGGCATGAGTTGCCAGCGCATTCGGGAGTTGCGCGACCACCTGGCGAGTCATGTTCACATTGAGACATTGTGGAATCTCAGCCTGGACAACGATGTCATTCGGGAACAGTTTGGCAGCCAATCGGATTTGCAGCAAATCAAGGAACAGGTCTGCACGCAAATTGCCAAAGGTCGTGAACAACTGGAGAATTACGGCGCCGTTGTGAATGCCTACGGTTATGAGCTGTGCCTCAGCGACtcggatgaggaggaggatgaggagctgGCTGGCAAATATCAGTGTCTGCGCTGCAATGTCAACTTTGCACGCAAGCATCAATTCGTGCGTCACACGCTCGAGGAGCACACGGACAGAAGTGAAACCCCTTTGGAACGCTGCAATATCTGTCAAATTGGCTTTGTTTGCGCCAagctgctggagcagcatcAGCGTACACAGTGCCTCAATCCGCTGAAGCGTTACAGCTGCGAGAATTGTCCTGGCAAGTTTATTTGGCTGCAGAATCTGCAGCAGCATGCATGCAGCAGGCTGCAACAtgatcagcagcaggaacTGCAGCACCGGcatcaggagcagcagcaggcacctCATCGCCAGATCCAGTGTTGCCTGTGCAATGAACGACCCAGCAGCATGGCTGCCCTACGCTCTCATTTACTCACTCATCGCGATGGACACACGGACATCGATCCGCATCAGCAGTCTGCCTTCTTTCGCACCTATTACCAGGACGACGGCGTCAGCAGCCTGTCGGAGATCAGGGCACGCATCGCTGGCGACTTTGAGGCGCAGCTTTATGGAAGATATTTCAATGCGTGTACGGACAGCGGACAGGAACTGGACTTCAACGACTCCGACATGGAGTGGAGCGATGCACCCGCTCTGCATAGCTGTGCCTTGTGTGGCGAGAGTAGAATCCGCCTCAGTCAGCTGCTCCAGCATCAGCAGAGCCAGCACATTGAGCTGGCGGACAGACTGCCTCACGTCTGCTCAGATTGTGGATTGGGCTATGTGGCCGAGTCGCTGCTGCATCAGCATCGTCGTCGCATCTGCGCCAAGCTGCATGCCAAGTACCAGTGTCCACATTGCAGTCAGCGGTTCTATTGGCACTCCAACTACGAGCGTCACATTCAGGTGCAACATCCTGCGGAGAGGCAGCAGGGCCAGGAGAAGAGCAAGCTTCAGTGCAGCGAGTGCGATAAGGTGTTCATCTGGCGTAAGGATTTGACGCGCCACAAGCGCATGCATCAGTCGCAGGTGCAGTTCGAATGCGTCCACTGCGATCGCAAGTTCCATCGCAAGGATGGCCTCAAGTCCCACATGCGGATGCACAGCGAGCTGCCGACGTCGTCTCTTGGTGAGCAGCTGCGGCTGGTCTTGAGCCAGCTGTGTCGCCCCAATGGCTGCAAGCAGATCAAGTGCATGATTTGCCTGTCGCAGCACAGGAAGATCTCCGATTTGCGAACGCATTTGACTAGCCATCAGTTGAGACTGTGTTTGGCCGAGGAGCGAGGCATCGCAAACATTTGTCGTGTTCTCTATCCGGAGCTGAACACGTCATTGAATCAGCAGGCATTGATCAAGCGCATCCAGCGGGATCTGGGCAATGAACTAGAGCTGGAGAGATTCGTTTCGATAACCAACGAGGCGGGCATCGAACTAAGCCTGGACAGCAGCGAAACGGACACGGATTCGGATTGTGCAGCAGAAACCGAACGGAGCTGCATGGAACCCGGTTACAGCTGTGAACTGTGCCAGGTGCAGGTTATGCGCAAACATCAGCTCTATGCCCACCAGCTGGAGAAGCACATGTGGCACCAGGCGACGCACGTCTGCAGCCACTGCCAGGCGAGATTCGTGaatgagcagctgctggacCATCACTATCGCACTCTTTGCCGCAATGCCCAGCGGCGTTTCCTGTGTCGCAACTGTCCGTTGCGCTTTCGATGGCGCGATAATCTAAAGCTGCACAATGTTGTGGCGCATCATGAGCGAGGGAATGTGGAACGGCACTCCAATGTGGACATTCAGTTGCGTATGCTGCCCGTGGTTAGCTATGACTGTGTCGAGTGCAAGCGTagctttaaaatgcaaaaggatCTCACACGGCACACCTTGATGCATGCCCAGGAGTCGAGCATCTATCGGTGTCGCTGGTGCGCTCGACGCTTCTATCGCGAGTCGAATCTGCTGCAGCACATCGAGCGCCATGGCATCAGCGCCGATCAGCTGCCCTATGCGGAGGCCCTGCTCAACGCCAGTCGTCAGCCGCACGGCCCGAAGTGCATCAAGTGTCGCGTGTGTGAATTATCCTTTGGCAGCATTGCGGCACTGCGTTCGCATCTGCAATCGTCGCCAGTTGGCACTCATCATCCGATTGAGTCCATGGCCAACTATTCGATCACCAATCAGCTGGGTTACGAGCTGCACCTGGACGACTCAGAAACGGATGAGGAAGCCAAGCCGGCGGGCACCCCGGCGTATTACACGTGCGGCATGTGCCAGCTGCGTTGTGTGCGCAAGTTTGagctgcatcagcatcagcaggcCATGCATCCTCTGGAGCGCATCGCCGATGGCTGCGATCTGTGCATCTTCAAGAGCGTCTCGCCCGATCTGATTGCCTATCATCGGCGTGTGCTGTGCGAGAACACGGAGAAGCAGTTCAAGTGCTCTAAATGCAGCTACAAGTTTATGTGGCAATCGAATCTGGTGCAGCACATCCAACTGCAGCATCCCAGCAGCGAGGAGTCGACTACAAAAACATTAATGCCCAAGGCCGTGCCCGAGTGCCACATCTTCCAATGTGGTCAGTGTCCCAGTAAATACAATCGCAAGGATCGCCTCACCGCCCATGTAAAAAAATGTCACACAGCTGGCTCAACTGCGTCAACAAAAGCGCCAACGGTTGCCAAGCAGCAGAAGAGTTTCCTGTGCGCATTCTGCGGCAAGGCGGTGAGCTCATCATCAAATTTAATCATACACATACGTCGGCACACCGGCGAGAAGCCGTTTAAGTGTGATTACTGCGACATGGCTTTTCCGCGCTCCTCCGATCTCCAGTGCCATCGACGCACTCACACCGGCGAACGGCCACACATCTGCACCGTCTGCAAGAAGGGATTTGCTCGCTCCTACAAGCTGCGGCAGCACATGCGCACCCACAACGGCGAACGGCCCTACAAGTGCACCTTCTGCGACAAGAGCTTCAAACAGTCCAATGACCTCACACTCCACATCCGGCGCCACACGGGCGAGCGACCTTATCAGTGCAATACGTGCGGCGAGCGATTCATTCAGGGCACAGCGCTCAGGTACCATCGAATGCAGAATGGCCACTATGAGACGGAAGAGGGTCAATCGAAAGTTGACTAA
Protein Sequence: MLPTNVCRTCALQDDNLLALATRSEKFAKKSICEMLHELTQNDPLLEHIDDKLPQHLCGQCLSQLEAAYAFVLQAREAQEQLLLQLRKGLQTQCLDETPIDISIEHIKIETDIDLDADTADAVDAEFDEERGKLETDSDSSQDNVKDHDVEVQTLQLRRSARRAKLSTDSENESISEQVQPLPVKRGRGRPRRVAKMETTTNEDGRHVCEVCGKTFSWYRDMQRHARIHFEQAGIVCEHCGKKFLRKDKYMTHLRSHTNYVATDRLPRSSEWRYAERLYSSGRLMRVECKLCGMSCQRIRELRDHLASHVHIETLWNLSLDNDVIREQFGSQSDLQQIKEQVCTQIAKGREQLENYGAVVNAYGYELCLSDSDEEEDEELAGKYQCLRCNVNFARKHQFVRHTLEEHTDRSETPLERCNICQIGFVCAKLLEQHQRTQCLNPLKRYSCENCPGKFIWLQNLQQHACSRLQHDQQQELQHRHQEQQQAPHRQIQCCLCNERPSSMAALRSHLLTHRDGHTDIDPHQQSAFFRTYYQDDGVSSLSEIRARIAGDFEAQLYGRYFNACTDSGQELDFNDSDMEWSDAPALHSCALCGESRIRLSQLLQHQQSQHIELADRLPHVCSDCGLGYVAESLLHQHRRRICAKLHAKYQCPHCSQRFYWHSNYERHIQVQHPAERQQGQEKSKLQCSECDKVFIWRKDLTRHKRMHQSQVQFECVHCDRKFHRKDGLKSHMRMHSELPTSSLGEQLRLVLSQLCRPNGCKQIKCMICLSQHRKISDLRTHLTSHQLRLCLAEERGIANICRVLYPELNTSLNQQALIKRIQRDLGNELELERFVSITNEAGIELSLDSSETDTDSDCAAETERSCMEPGYSCELCQVQVMRKHQLYAHQLEKHMWHQATHVCSHCQARFVNEQLLDHHYRTLCRNAQRRFLCRNCPLRFRWRDNLKLHNVVAHHERGNVERHSNVDIQLRMLPVVSYDCVECKRSFKMQKDLTRHTLMHAQESSIYRCRWCARRFYRESNLLQHIERHGISADQLPYAEALLNASRQPHGPKCIKCRVCELSFGSIAALRSHLQSSPVGTHHPIESMANYSITNQLGYELHLDDSETDEEAKPAGTPAYYTCGMCQLRCVRKFELHQHQQAMHPLERIADGCDLCIFKSVSPDLIAYHRRVLCENTEKQFKCSKCSYKFMWQSNLVQHIQLQHPSSEESTTKTLMPKAVPECHIFQCGQCPSKYNRKDRLTAHVKKCHTAGSTASTKAPTVAKQQKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDYCDMAFPRSSDLQCHRRTHTGERPHICTVCKKGFARSYKLRQHMRTHNGERPYKCTFCDKSFKQSNDLTLHIRRHTGERPYQCNTCGERFIQGTALRYHRMQNGHYETEEGQSKVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00577186;
90% Identity: iTF_00610043;
80% Identity: -