Dimm000600.2
Basic Information
- Insect
- Drosophila immigrans
- Gene Symbol
- -
- Assembly
- GCA_963583835.1
- Location
- OY757141.1:4058743-4063596[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0013 0.088 13.3 0.4 1 23 141 163 141 163 0.98 2 12 5.1e-05 0.0034 17.7 0.4 1 23 391 413 391 413 0.99 3 12 0.64 42 4.9 1.4 1 23 419 442 419 442 0.90 4 12 0.27 18 6.0 1.5 1 23 468 491 468 491 0.92 5 12 0.0011 0.071 13.6 1.9 3 23 769 789 768 789 0.92 6 12 0.043 2.9 8.5 1.4 1 23 795 818 795 818 0.98 7 12 2.2 1.4e+02 3.2 1.3 3 23 856 876 854 877 0.92 8 12 0.0038 0.25 11.8 0.8 1 23 898 921 898 921 0.97 9 12 4.2e-05 0.0028 18.0 0.1 2 23 1065 1087 1064 1087 0.93 10 12 0.0032 0.21 12.1 3.4 2 23 1094 1118 1093 1118 0.89 11 12 0.015 1 10.0 0.7 1 23 1123 1145 1123 1145 0.98 12 12 0.0064 0.42 11.2 0.5 1 23 1151 1174 1151 1174 0.96
Sequence Information
- Coding Sequence
- ATGGCATGCAAGCGATTAAAAACGGACGACATGGAAGTGGATTACAAATTTGCTTGTCGCTGTTGCCTGAAGTCTGAGGCAGAATTCTTCAAGCTGGACGCTCTAACCCAGATAGGCATGGGCGACAATAATGAGAACTCTACAAAAATACCTCTAATACGCCTGCTACTATACTGTTTGCGTACTGAAAATCTGAATGAGCTGCCGCAATACATTTGCGTCGACTGCAGCAAAAGCTTGCAAATCGCCTACCTTTTCCTACAAAACGCTCACAGGGCACATGAGATTCTTTGTCGCAAATTGTGCCCTGGCAAGATGAAAACGACGACGCGATTTAATGGTCAACAATCCCTCGAGTTCAATCGAGGAAACGTTAAATTAGACGCGACCAACACGAAGCTCTCAAAGGCTTCTGTGCGCCACGAATGCAAAATATGTGGCGCCATAATTTATAACCGTCTGGAACTGAAGCAACATATTCGCATGCATACAgAGGAAACGCGGCATTCGTGCAAGTTGTGCAAATTTGTGACCCTTAAACAGAGACAGCTGCCCGAGCATTATAGAAAAGTGCATGGCTTGACGGCAGCCCAAATTGATCAGCAACTGAAATTGAGAAAGTCCTTACAGTCGGCTGTGCCCGCTACCAATGTGACTTCCAAAGCAACAAAAGATACGGACGATGGTCAGGTGAAAGTGTGTACACTGGAGGACATGGAGTTGCTGATTCCCACTGTGCTGACGCCCGAAGACTTTTCGCAGCCTCAACTTGACGCGGATCAACTACGTGATATTGAAGAACAATTGGCCAACTCCCTCGGTGTTGTTCAGTCTGATTCGTCCACCGTCTTGCCCACCGATTCGACGATAGCTCAGGACGGCAGTCCCAATGTGAGCATAGGTGCCGAGTTTCTTGTCATGCCCGATGGCTCATTGCAGCAAGTACAAGATGGTGGCGTAGTCTTTGAGTACATTGATGACAGCAAAACTTCGACTACAAATGCGACCCCAAACATAAGTCTACACAACTTACTAGATGACTCCAAGTCAGATTTGACATACAGTGCAATGGATATTGAGATGAACCGTATGGTTGTCGAAGATTCGTTGCCTCAAATCACTGTGAAACCAAAACTAAGACCGGGTCCAGGACCGATTACCGTCATGAAGTACAAGTGTAATCTGTGTCCCAAAATATTTCCCACAGTTGCACGCCTTAAATCTCATCAATTAACGCATAGTCATTTGCCCAAGTTCTATTGTGATCAGTGCCCTTACCACTCGCTGCGCAGCTCCGATCTCATCCAGCACTATACAGATGAGCACAAGTCCTCCATTGGCGATAGCAAAAGTCACGTTGAGAAATCATTACATTCGTTGTCAACGGATAGAAGTCGTATCTACTCATGCGATATGTGCTTATTTGAGACACCAAGCAGTGCCCATCTAAAATCGCATTATAGTGATAAGCACATGATACAGCCAAGCAACGTACAACTGCGTCCCAGTTGGACAATTGACACTAAGGATAAGAGCGGCAGTCCGTCGAATCTCCCATTGGGTATTACATATCCATCAACGAACTCTGTAGAATCAGTTgaaacaacagcgaaaacTGAGTCTATTGCAATCACGAAGCCAACGACAAGATTACAGCAAATACATCCAGCACAgccgacaacaacagctgtgTTAACGTCTACTGGTGATATCAATGTGGTCGTAGATGCCACCTCGCTGTTCTATGCTGCAGGGGTATCTCCAACGactggaacaacaacaacaacagcaacgaccaCAACGACATCAACAGAAGCTACTGTAGATGTTTCTGATACATTTGCGATATTTCCCGAGCAATCTAAATCCTTGAGAGCCACATCAAAGAAAGCAGAGTCAAGTGGCTTGTTGCCTGTTAGTGTTTCTGCTACTGCTGgtaatgttgctgttggttcCACACCAAATCCAAACAATTCCATATTTAGCGACATGCAAGATTTTATTGATAACACCGATGTCGCAGCTATATGCACCATACCCGCCGACGATATGCCTGTCGTTGATGGTGATGATATTGTTATTGATAACAATAATATGAGTTTGGATTTTGATGCCGAGAACCTGTTTGATGACTTTGAGGAAGATGTAGAAGTGGgcgaagatgaagatgaagatgatgcAGAAAATGAAGATGAGAATGATAACAACGATGCTGCTGCCGATCAAAATTTGTTACTCACCagtgatgacgatgatgtcgACGACTTTGACGACGAGCAATCGAAGAATCTGCAGAAACCATATTGCATCTATTGTAACAAAAAGTTTACCAGCCAATACAAGTTTGAGAATCATATGTTTGTGCATCGCGGACTGGCGCCTTATCGATGTGAACTCTGCACGAACCTGTACAATATGAAGCGTCTGCTCATACGGCACTACAAAACTGTGCATAAGCGCATGCCTACGCGAGACATGGTTCAGGCAAAGGGCGACAAGGTAGCCGTTGAGCGCACTGCGATCGAGAAGCTGAGCATGGGTGCGGACAAACCTCCCATGGTGATGTGTGCCAAGTGTCCTTTTGAATGCGAGCTAGAGGATGAGATGCGAAAGCATCTTAACGCTCATCATGGCATTAATGATGGCGTCGCTGTGCACGCTAACGAGGTGTTCATCATACACAaACTGCCTTTTGAGTGCCCACGTTGCATTCGTTCGTTTGCCGCGAAGCGCACTTTGACTCGCCATTTGCAGCGAAGTCATTTAGTAGACACAATCATTGAGATGCAGGCACCTCAATTGACCACGAGTTCATCGgaaacaacaaccacatcgACGGCTACAATCGCCTTGCCGAAGAGAGCACAGAGTATTGTTGCTGACACTGACGCCGATACAGATGGTGATGGCTATGAAAAATGCGCAACAGTAATCGAAAAAGCACAAACAACAttaacgacgacaacaacaccagAGACATCAACACCCTttccaacgccaacgccatttGATTTTGATCTGGATTTCATTGAAAATGGCGCACACGGCAATCCGCTTAATAGCAACAATGAGAACTTTAACGTTTTGCCCATCACTCGACAATTGCTAAATGGCAGCGATAAACTACTGACAGCAGCGTTGGAGCCATCACCAGTTAAAGATCTCCGATCAAGACATGCACCGCGTAAAGTTCCGTGCAAGTTGTGCCCCAAGGAGTTTTCATCGAACTCAGACCTGGAGCAACACGTGGATTCGGAGCATCGTACAAATATGCCCTTGAAATGCGGCATTAATGGCTGCGCTAAGACTTTCAATTACAAGCATCATCTGAAGAGACATCAAACAGCCTCCCATACACCTGTACAATATATATGTCCCGAGTGCGGTCGCGATATGTTAACCAGTCTCCATCTCAGAAATCATATAAAAACACACAAGGGAACACATTCCTACAAGTGTCCCAAGTGTGTTCGCACGTATATGCGACTAGGGCCCTTTCAAAGACATGCGCTGCGTGAACACGGATGGGATCTCTCTGAGGATgacattaataaaatgtatagcGTGAATGAACCCGTACCTTCCATGAAAACGCGGATGTCGCTTAATGTTGAAAAAGATACGTCTGATTAA
- Protein Sequence
- MACKRLKTDDMEVDYKFACRCCLKSEAEFFKLDALTQIGMGDNNENSTKIPLIRLLLYCLRTENLNELPQYICVDCSKSLQIAYLFLQNAHRAHEILCRKLCPGKMKTTTRFNGQQSLEFNRGNVKLDATNTKLSKASVRHECKICGAIIYNRLELKQHIRMHTEETRHSCKLCKFVTLKQRQLPEHYRKVHGLTAAQIDQQLKLRKSLQSAVPATNVTSKATKDTDDGQVKVCTLEDMELLIPTVLTPEDFSQPQLDADQLRDIEEQLANSLGVVQSDSSTVLPTDSTIAQDGSPNVSIGAEFLVMPDGSLQQVQDGGVVFEYIDDSKTSTTNATPNISLHNLLDDSKSDLTYSAMDIEMNRMVVEDSLPQITVKPKLRPGPGPITVMKYKCNLCPKIFPTVARLKSHQLTHSHLPKFYCDQCPYHSLRSSDLIQHYTDEHKSSIGDSKSHVEKSLHSLSTDRSRIYSCDMCLFETPSSAHLKSHYSDKHMIQPSNVQLRPSWTIDTKDKSGSPSNLPLGITYPSTNSVESVETTAKTESIAITKPTTRLQQIHPAQPTTTAVLTSTGDINVVVDATSLFYAAGVSPTTGTTTTTATTTTTSTEATVDVSDTFAIFPEQSKSLRATSKKAESSGLLPVSVSATAGNVAVGSTPNPNNSIFSDMQDFIDNTDVAAICTIPADDMPVVDGDDIVIDNNNMSLDFDAENLFDDFEEDVEVGEDEDEDDAENEDENDNNDAAADQNLLLTSDDDDVDDFDDEQSKNLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVAVERTAIEKLSMGADKPPMVMCAKCPFECELEDEMRKHLNAHHGINDGVAVHANEVFIIHKLPFECPRCIRSFAAKRTLTRHLQRSHLVDTIIEMQAPQLTTSSSETTTTSTATIALPKRAQSIVADTDADTDGDGYEKCATVIEKAQTTLTTTTTPETSTPFPTPTPFDFDLDFIENGAHGNPLNSNNENFNVLPITRQLLNGSDKLLTAALEPSPVKDLRSRHAPRKVPCKLCPKEFSSNSDLEQHVDSEHRTNMPLKCGINGCAKTFNYKHHLKRHQTASHTPVQYICPECGRDMLTSLHLRNHIKTHKGTHSYKCPKCVRTYMRLGPFQRHALREHGWDLSEDDINKMYSVNEPVPSMKTRMSLNVEKDTSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00614483;
- 90% Identity
- -
- 80% Identity
- -