Dimm013451.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila immigrans
Gene Symbol
RREB1
Assembly
GCA_963583835.1
Location
OY757144.1:6087527-6094530[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.0057 0.38 11.3 0.6 1 21 251 271 251 273 0.96
2 13 0.00033 0.022 15.2 0.2 1 23 283 305 283 305 0.98
3 13 7.9e-05 0.0052 17.1 7.3 1 23 311 333 311 333 0.98
4 13 0.67 44 4.8 2.6 2 20 549 567 549 569 0.93
5 13 0.0087 0.57 10.7 0.1 1 23 719 741 719 741 0.97
6 13 1.2e-05 0.0008 19.7 0.7 1 23 751 773 751 773 0.99
7 13 0.00082 0.054 14.0 2.0 1 23 779 802 779 802 0.97
8 13 0.0029 0.19 12.2 2.0 1 23 1054 1077 1054 1077 0.95
9 13 8.5e-05 0.0056 17.1 0.3 2 23 1404 1425 1403 1425 0.97
10 13 0.14 9.4 6.9 6.3 1 23 1431 1454 1431 1454 0.97
11 13 4.6 3e+02 2.2 3.7 1 23 1579 1602 1579 1602 0.78
12 13 0.0083 0.55 10.8 0.5 3 23 1656 1676 1654 1676 0.96
13 13 0.0014 0.09 13.2 4.8 1 23 1682 1704 1682 1704 0.99

Sequence Information

Coding Sequence
ATGCTGGccacacaacagcagcagcaacagcaacaacaacacacagcgacagcagcaacagttggcgccgcaacagcgacagcgacaacagttGCCCACAGCGACGATGGACAGAGCGTGGACGGCGAGCGACAGCGACGCGATTCGACCACCTCAGAGTCGTCGCTGGAGCATCTCGACTTGGGCCGCACACCAAAGaagctgagcagcagcagcggagcGCCGCAGCCAACGTCGACGCCGCACgagacgacgtcgacggcaaCGTCGCGCAAACGCAAACtgcgccaacagcagcaacaacagcagcagcagcagcaacaattgtccGATGAAgacgaacagcagcagcagctggagacaacaacgcagcgactgcgacacaAGCAGCGACGCAACGTCGCGGCCAGCGCCAGCATCGTTGTCGATTACAGCGCCAGCGGCGACGCGAGTTCGCTGCGCAAAAAGTTTCGTTTCAAtcatcgcagcagcagcagcgccgccAATGCAACCAACGGTGAACTCTCCGAATCGGGCTTCGTCGACGGCAGCGCCAACAGCGGCTTCttgctcagcagcagcagcggcagcgcagtTGCCAGCgtcgcagccgccgccgcagttgcagcgcagcaacagcaacagcagcaacagatgtCGTCGAGCAGCTCGGGCGGCTCGTCGCCCCAAGGCGGCCAGAGCTTGTCGAGCGCCGAGTCCGGCATCGGCGCCGGCGACGAGCACATGAAATATGTGTGCCCCATCTGCGAAGTCGTCTCGGCCACGCCCCACGAATTCACCAATCACATTCGCTGCCACAACTACGCCAACGGCGACACCGAGAACTTCACCTGCCGCATCTGCTCGAAGGTGTTGTCGTCGGCCTCGTCGCTGGACCGTCACGTGCTGGTGCACACCGGCGAGCGGCCGTTCAACTGCCGCTACTGCCACCTGACGTTCACGACGAACGGCAACATGCATCGTCACATGCGCACACacaagcagcatcagcagcatcaacagtcgcagtcgcagtcgcagccacagcagcaacagtcgcagtcacagcagcaacagtcgcaatcgcaacagcagcagcaacatcgacgTCAGCAACAGGCGGCAACGGCTGCGAGCGCGGCACAGCTGCtgacgacgacgtcgtcggGGCGAGCGGAGAGCTACGAAAGCGACGCCAGCTGCTCGACGGACGTGTCCAGTGCACAGagtcacagcagcaacagtcacagcagcagcagtcgccacagcagcagcaatcgatccctcaacaacaacaacaacaacaataacgagtTGGATTTGGAGTTGAACCTGGAGCTGGAGCACAAGAGTCACAAActcaaccacaacaacaataatcacatcaagcagcagcaggaggatgGGGAGGAAGAGGAAGATGATGAGGCGGAACAGCTTGAAGATGAGGACAGCGAATCGGAGGTGACGCAGGTCATCACCAGCACTCCCGACGTCGCCACTTTGTTGGCTTCCTCGTCCCGATCCGGCGGCACAACGCCCAACCAGCTGCTGTTGAGCTGCCCGGCCTGCTCGGCAGATGATTTCGAATCGTTGCCGGCGCTCTGTCAGCATCTGGATGCCCAGCATGCGGACATTCCGGCCAAGTGCCGGGAATGCGATGTGATCTTTGGCAGCCATCGTCAGCTGCAGACGCACAGTTGTCGCATgcagttgctgccgctgctgggcGCCAGTTCGTCGCCGCTGCACAAGCAGGAGCACGACCTGGACGACGACCTGGAGGTGGAAGTCGATCAGGAGCGCGAACGAGAGCGCGAACGCGatgaggaggagcagcaacagGTGCAGCACAGCGAACGCGACGATTTCTTTCAGCAGCTGTACCTCAAGGGAAGGTCCGGTGCGGTAGTAGCGCCGCCTTCTCCCATCAAACACGAGCCCGTCAGCCAGGACAATCGTCAGGATCTGGCCGACATTCAGAGCATACTCAACATGaccagctccagctgcacCTCCAGTTTTCTGCGCAACTTCGAGCAGTCCGTCAACACGCCGTGCTCCAGCCAGTACAGTCTGGACGGCCGCGATGGCGACGAGGAGGCTCAAGATGCCTTCACCAGCGAGTTCAGACGCATGAAGTTGCGCGGCGAGTTCCCCTGCAAACTGTGCAGCGCCGTCTTTCCCAATCTGCGCGCCCTCAAGGGCCACAATCGTGTCCATCTGGCTGCCGTGGGTGCCGCCGGACCTTTTCGCTGCAACATGTGTCCGTATGCGGTGTGCGACAAGGCCGCGCTGGTACGGCACATGCGCACCCACAACGGCGATCGGCCCTACGAATGTGCCGTCTGCAATTATGCGTTCACCACCAAGGCGAATTGCGAGCGACATTTGCGCAATCGTCATGGCAAAACGTCGCGCGAGGAGGTCAAGCGTGCCATACTCTACCATCCGGCGGAGGATGCGAGCTGCGAGGACGCCAAGTCCAGCGGCCAGCAGGCCGATTTGGCTGAGCTCAGTTTCCGCTCGACGACGCCACCGCCGTCGACGACAGTCGATGTTGCCGCCAGTTCGCAGCTGAAGCACATGTTGCTGGCGGAGGCGCCCAAGATTCAGGTGAAGAGTCTCGATCAGCTGGTGGAGAAGCCGCCCGCCATGGATCTCAGCATGGATGTGCTGGATCTGAGCAAGAAGCCAACGCTGGCGCAGGAGCTGCTCGAGCAGCGCGAACGCGAACGCGACCGCGAACGTGAACGTGAACGTGAACGGGAGCGTGAAAAGGAACGCGAACTGGAGCACgaattgttgctgcaacaacagcagcaacagcagcaacagcagcagcaactgtttgGCGCTGGGGATGCGGCCACGCAATACATGCAGCAGCTGTTCCGCAATTTGATGTTCCAGCAGTCGCCCGGATTTCCCTTCTTCCCGTTCATGGCGCCACCGAatgcggcagcaacagttgccggcGACAAAGGCGCCGTCGCAagcacggcagcaacagcggcagcaacagcgccgCCGCCTTTGGGCTTGCCGCTGGCCAATGTGGGCGTGCCGGTGCCCGCCGGCGGTCCCGTCAAGATGGTCATCAAGAACGGCGTGCTGATGCCCAAGCAGAAGCAGCGTCGCTACCGCACCGAGCGTCCCTTTGCCTGCGAACACTGTTCCGCCCGCTTCACGCTCCGCTCCAACATGGAGCGGCATgtcaagcagcagcatccgCAGTTCTACGCCCAGCGTCAGCGCAGCGGTCATCACGTGATGCGCGGACGCGCTGCCTCCTCaagcgccgccgccgcagcagccgcagcagcagcagcagccgccgcagccgcagccatgTCCAATctgagccagcagcagcagcagcaacatcatggACATCATGCGCACATCTCCGATCAGGTGAAGTACGCGATTCTGGCGCAGCAGTTGAAGGCGCGCAAGGACACGGATCTGTTGCAGCAGGCGTTGGCGCACGGCTCGAGCAGCGTCGTCGCCAATCCGCTGCTGCATTTCGGCTACAAGGCGGCCCAAAACGGTCAGAGCAATGGACATGCAACgacatcgacgacgacgacgacggcagcgGCTGTGGATGATGATGAGCCGCCCAAGTTGATCATAGACGAGGACGACGAAgaggatgaggaggaggaggagtttgaggaggaggacgacgagGGCGAGGGCGAGGAGCTCGATGAGGACGAGGAGCCACAGCAAGTGGATCAAGCGCAGCCACCGCGCAGCTCCACGCCCATCGAGGCCGCCAAGAAGGTGGCCGAAACGATCCTAGAGCAAGCCATTAAATCGACGCACAAAACCGTTGAAGTTGTGCCCGAATCGAAACCGAAATCGCCGCCAGCGCCCGCATCGATGAAGACGCTGATTGCGCAGGCGGAATCCGTGGCCAAGTCACTGAAGGAAGTGGCAAGTTCGCCGTTCAAGGATGAATCTCAGGACCTTGTGCCCGTGGCCAAGCTGGTGGACAATGCGACCAGCAATCAGGTGTCGTTCAACAGCTACTTTCGGCCCAGCGACGTGGCCAACCACATGGAGCAGAGCGACGAGGAGGGTCTGGTCGCCTCCGGCAGCGCCAGCGAGAGCAACAATTCCGGCACCGAGGAcgtcaccagcagcagcagcaacgagccCAAAAAGAAGTCCGCCTACAGCCTCGCCCCCAATCGTGTCAGCTGCCCCTATTGCCAGCGCATGTTCCCCTGGAGCAGTTCGTTGCGTCGTCACATCCTGACGCACACCGGCCAGAAGCCGTTCAAGTGCTCGCATTGTCCGCTGCTCTTCACCACCAAGAGCAACTGCGATCGGCATCTGTTGCGCAAGCACGGCAACGTTGAGAGCGCCATGAGCGTCTATGTGCCCACCGAGGACGTCAGCGAACCGATTCCTGTGCCCAAGTCCGTCGAGGAGATCGAGCTGGAGGAGCAGCGACGTCGCAAGGCCGCCGAACTCGAACTGGAGCGGGAGCGTGAACGCGAACGCGAAAGGGAACGGGAGCGGGAGCGTGAATTGGAACGCGAGCGGGAACGTGAACGGGAACGTGAACGGGAGGAACGcgaacaacagcagctcatCCAGCAGCTGGCGGCGGCTGCACAGCTGAGCCAGCAAATGGCCGTGGCGCTGAGCAACAATGGTGGTGCGACCGAAGCGGCCGGCTCGGTAGTAGCTGGCGAGGCGCAGGGCAGCGATCTGCCCTACAAGTGCCATCTGTGCGAGTATTCGTTCGGTGAGCGGCTGCAGTGCCTGGATCACATTAAGCAACAGCATGCGCAGGAGtttgcgctgctgctggccaaggGCGCCATCGAAACGGAGTCGGAGCCTCCTCAGCTACTACCGCCGGCCGCCACAGGCGCTGCCTCCGACGAGGAAAACGGCGCCGGCACACGCACCAAATACCCGGACTACAGCAATCGCAAGGTGATCTGTGCCTTCTGTGTGCGTCGCTTCTGGTCCACCGAGGATCTGCGTCGTCACATGCGCACGCATTCGGGCGAGCGGCCCTTTCAGTGCGACATCTGCTTGCGCAAGTTCACGCTCAAGCACAGCATGCTGCGGCACATGAAGAAGCACAGCGGACGCAGCCACAATGGCGAGCAGGGACAATCGGATTGCTCCGACGACGAGCAATCCGCTTTGAACAGTCCGCCCagcacgcccacgcccacgcccacagcCTCCCCCATCTGCCTGCCGCAgtcacacaacaacaacaacaataacaacacttgccacaacaacaataataacaataataataacaacagcaaagtTAAGCAGAGCCTGCGTCTGCACGAGTTGCTGGACAAGGCGAACGAATGGCGCGAAAGTCATTTGGGCGAGCACAAGGAGAATTTGGGCGACACTACCAAGGCCTCCTCGGCTTCACCGGCTgcggccgctgctgccgccgccgccgctgctgctgcggctgccgctgctgctgctgcggtggCGAGCGGGGATCTGATTGGCAATCTGCTGGGCATCAGCGATCAGGGCATACTCAACAAGCTGCTCTCGTCGGCCGACGAGGCAGCCAAGCTCCTGGGCGTCGACAAgtaa
Protein Sequence
MLATQQQQQQQQQHTATAATVGAATATATTVAHSDDGQSVDGERQRRDSTTSESSLEHLDLGRTPKKLSSSSGAPQPTSTPHETTSTATSRKRKLRQQQQQQQQQQQQLSDEDEQQQQLETTTQRLRHKQRRNVAASASIVVDYSASGDASSLRKKFRFNHRSSSSAANATNGELSESGFVDGSANSGFLLSSSSGSAVASVAAAAAVAAQQQQQQQQMSSSSSGGSSPQGGQSLSSAESGIGAGDEHMKYVCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQQHQQSQSQSQPQQQQSQSQQQQSQSQQQQQHRRQQQAATAASAAQLLTTTSSGRAESYESDASCSTDVSSAQSHSSNSHSSSSRHSSSNRSLNNNNNNNNELDLELNLELEHKSHKLNHNNNNHIKQQQEDGEEEEDDEAEQLEDEDSESEVTQVITSTPDVATLLASSSRSGGTTPNQLLLSCPACSADDFESLPALCQHLDAQHADIPAKCRECDVIFGSHRQLQTHSCRMQLLPLLGASSSPLHKQEHDLDDDLEVEVDQERERERERDEEEQQQVQHSERDDFFQQLYLKGRSGAVVAPPSPIKHEPVSQDNRQDLADIQSILNMTSSSCTSSFLRNFEQSVNTPCSSQYSLDGRDGDEEAQDAFTSEFRRMKLRGEFPCKLCSAVFPNLRALKGHNRVHLAAVGAAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAILYHPAEDASCEDAKSSGQQADLAELSFRSTTPPPSTTVDVAASSQLKHMLLAEAPKIQVKSLDQLVEKPPAMDLSMDVLDLSKKPTLAQELLEQRERERDREREREREREREKERELEHELLLQQQQQQQQQQQQLFGAGDAATQYMQQLFRNLMFQQSPGFPFFPFMAPPNAAATVAGDKGAVASTAATAAATAPPPLGLPLANVGVPVPAGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRAASSSAAAAAAAAAAAAAAAAAMSNLSQQQQQQHHGHHAHISDQVKYAILAQQLKARKDTDLLQQALAHGSSSVVANPLLHFGYKAAQNGQSNGHATTSTTTTTAAAVDDDEPPKLIIDEDDEEDEEEEEFEEEDDEGEGEELDEDEEPQQVDQAQPPRSSTPIEAAKKVAETILEQAIKSTHKTVEVVPESKPKSPPAPASMKTLIAQAESVAKSLKEVASSPFKDESQDLVPVAKLVDNATSNQVSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSNEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRKAAELELERERERERERERERERELEREREREREREREEREQQQLIQQLAAAAQLSQQMAVALSNNGGATEAAGSVVAGEAQGSDLPYKCHLCEYSFGERLQCLDHIKQQHAQEFALLLAKGAIETESEPPQLLPPAATGAASDEENGAGTRTKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGRSHNGEQGQSDCSDDEQSALNSPPSTPTPTPTASPICLPQSHNNNNNNNTCHNNNNNNNNNNSKVKQSLRLHELLDKANEWRESHLGEHKENLGDTTKASSASPAAAAAAAAAAAAAAAAAAAAVASGDLIGNLLGISDQGILNKLLSSADEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00553919;
90% Identity
-
80% Identity
-