Basic Information

Insect: Drosophila immigrans
Gene Symbol: pita
Assembly: GCA_963583835.1
Location: OY757141.1:11026239-11028803[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00098 0.065 13.7 2.0 1 23 240 262 240 262 0.96

2 10 2.6e-06 0.00017 21.8 2.8 1 23 268 290 268 290 0.93

3 10 1.1e-06 7.5e-05 23.0 1.1 1 23 296 318 296 318 0.99

4 10 0.0014 0.092 13.2 0.2 1 23 324 346 324 346 0.97

5 10 5.8e-05 0.0038 17.6 2.1 1 23 352 374 352 374 0.93

6 10 0.00023 0.015 15.7 0.1 1 23 380 402 380 402 0.97

7 10 0.0008 0.053 14.0 6.5 1 23 408 430 408 430 0.98

8 10 3.7 2.5e+02 2.4 2.3 1 23 438 460 438 460 0.94

9 10 0.0083 0.54 10.8 0.7 2 23 466 487 465 487 0.95

10 10 2.7e-05 0.0018 18.6 0.5 1 23 493 516 493 516 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00098	0.065	13.7	2.0	1	23	240	262	240	262	0.96
2	10	2.6e-06	0.00017	21.8	2.8	1	23	268	290	268	290	0.93
3	10	1.1e-06	7.5e-05	23.0	1.1	1	23	296	318	296	318	0.99
4	10	0.0014	0.092	13.2	0.2	1	23	324	346	324	346	0.97
5	10	5.8e-05	0.0038	17.6	2.1	1	23	352	374	352	374	0.93
6	10	0.00023	0.015	15.7	0.1	1	23	380	402	380	402	0.97
7	10	0.0008	0.053	14.0	6.5	1	23	408	430	408	430	0.98
8	10	3.7	2.5e+02	2.4	2.3	1	23	438	460	438	460	0.94
9	10	0.0083	0.54	10.8	0.7	2	23	466	487	465	487	0.95
10	10	2.7e-05	0.0018	18.6	0.5	1	23	493	516	493	516	0.95

Sequence Information

Coding Sequence: ATGAATGCGCTCACAGCGTTGCCACACTGTTTGGTGGCAGCGCGCATGCGCAGAGTGAACAAAACCGATGACATGCCCGGCTTCATTTGCTTGGATTGCCGGCTGCTGTTCGAGCACAGTTATCGTTTCAAACAGATGTGCAAGAAAGCTGAGACGCTGCTGCGCCAATATCCACTCACTGGCACCTGGCCAGCGCCGCTAGAGAAGCCGCGAGCTCCCATGGTAGGAGCAGCCAAGCGGGAAGCCCCGCCGCCTGATGGGCAGCCGAAGAAACTGCTCAATACGATGGGCAGACCCAAGAACGTGACCATTGAGAACGTACAGATCTTGCAAAGCAGCACTGTGCCGCCCCCCAAGAAGCTGCTCAATGTGGCGGCCGCCAGCACAGCCGAGCCAGCGGTTCCACCGCGAGCAACGATAAAGCGTTCGTATCAGGTGAAGGTGGAGAATAGTCAGGAGCTGTCCATGGACGATGTGCACAATTTGATCGCGGACATTGAGGGCCAATTGGATGATATAACGCGTTCGCCAGCCAAGTCCCCGATGCGTCTGCTGAACAAGATCACCGAGGAGCCTGTGGAGCCACGTATAGCACCGCCACAGCTCAAGCAATACGAGGACGGCAATATGGCACTTGTCACCGCCATCCTCGATCCCAATGACCTCGATGCAGCTGCCGATCCGACCAAGAATGCCGAGCGCGTGGCCACCAATGTGTTTCCCTGTACGCATTGCCATCGCTCGTTTCCGTTGCAGCAACTGCTCGACATACATATGGTGAATCACAAACGTGAGCGCAGTTTTCAATGCCCCGATTGCGACAAGAGCTTCTTCTCCAAATACGATCTGAAGAAGCACAGCTTTCTCCATACCGGCGAACGTCCTTATAAGTGCACCATCTGCAGTGCCAGCTTCAACCGACGTGCGCTCCTCAATCGCCACGAACGCACGCACACCGATGTGCCCAAGTACATTTGTCTCTACTGTGAGCTGCCGTTCATCTCGCGGGAGGAGATGGAGAAGCATACGCTGAAGCACACCAGGCATCGTCCCTTCCAGTGTGACTTCTGCCAGAAGTCGTTCAGCTTCAAGCAATCCCTGGAGCGACACGAGGTATTACACAGCACCAATTTGCCGTTCCCGTGTCAGTATTGCAGTCGCGGCTTTGTGACCGCGGGCAGGTTGGCCAGCCACCTGAGGGCGCATGCTGGGAAGCGTGCTTATCCTTGCAAGTACTGCAAGAAGTCCTTCCTGTTGTCCCATCATCTGTCGCGGCATTTGCGAATGCACGATCTGGCCTCGACAGCCTCGTTTGCTTGCTGCATTTGCAAGGAGACGCATCCATCGTACGCCAGTTTACTCAAACATTCGTCGGTCCACGCGAAGGATTCGTTGATGTGCGCCCTCTGCAAGACGCGGTGCTCCAGTGAGTACGGCCTGGAGACGCATATGTTGGCGCATCGTCATAGCGATCGATTTGCCTGTGAATTTTGCGACTACATTTTCATCACGTACAGCGAACTGAAGAAACATATTGATAAGGATCATGTTTTGGACATGGTGCCGTATAAGAATGAAAAGGAAGTGAAGGAAGAGTCGGAATTGTTAGAAGAGCTGCTTGGTGAAGAGCCAGCAAATGAATCCGATGAACCAGCATCACCACCGAAGGCAAAATTGCGTAAATTGAGTGCCGAACCAAAGCAGCAGGTGAAGAAGGATGAACAGGCTGAGAAAGCTGAGCCATCTGAGAAAGCTGAGCAGGCACCAACCTCGTCGGAGCGGGCCAGAAAATCGGGTAGTACCAGGAGCAGTGCCGCTGCCTCCTCAGTCTCCCCCGAGGGCAAGCCCTCAACACGCAAGCAACGCGCTGTTAAGCAAAAAGTGGCTGCCAATGAAACCGAGGTGGCTGAAGAGCAGCCCAAACCGAGCAGCAAGCAACGGATTGTCAAGATGACAAAGAAGTAA
Protein Sequence: MNALTALPHCLVAARMRRVNKTDDMPGFICLDCRLLFEHSYRFKQMCKKAETLLRQYPLTGTWPAPLEKPRAPMVGAAKREAPPPDGQPKKLLNTMGRPKNVTIENVQILQSSTVPPPKKLLNVAAASTAEPAVPPRATIKRSYQVKVENSQELSMDDVHNLIADIEGQLDDITRSPAKSPMRLLNKITEEPVEPRIAPPQLKQYEDGNMALVTAILDPNDLDAAADPTKNAERVATNVFPCTHCHRSFPLQQLLDIHMVNHKRERSFQCPDCDKSFFSKYDLKKHSFLHTGERPYKCTICSASFNRRALLNRHERTHTDVPKYICLYCELPFISREEMEKHTLKHTRHRPFQCDFCQKSFSFKQSLERHEVLHSTNLPFPCQYCSRGFVTAGRLASHLRAHAGKRAYPCKYCKKSFLLSHHLSRHLRMHDLASTASFACCICKETHPSYASLLKHSSVHAKDSLMCALCKTRCSSEYGLETHMLAHRHSDRFACEFCDYIFITYSELKKHIDKDHVLDMVPYKNEKEVKEESELLEELLGEEPANESDEPASPPKAKLRKLSAEPKQQVKKDEQAEKAEPSEKAEQAPTSSERARKSGSTRSSAAASSVSPEGKPSTRKQRAVKQKVAANETEVAEEQPKPSSKQRIVKMTKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00509269;
90% Identity: iTF_00509269;
80% Identity: -