Basic Information

Insect: Drosophila immigrans
Gene Symbol: -
Assembly: GCA_963583835.1
Location: OY757144.1:14349029-14350921[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 8.5 5.6e+02 1.3 1.1 2 17 12 27 11 28 0.88

2 9 5.1e-05 0.0034 17.7 7.8 1 23 328 350 328 350 0.98

3 9 1.8e-05 0.0012 19.2 2.9 1 23 356 378 356 378 0.99

4 9 1.1e-05 0.00074 19.8 2.0 1 23 384 406 384 406 0.98

5 9 3.3e-05 0.0022 18.3 2.6 1 23 412 434 412 434 0.99

6 9 6.6e-05 0.0044 17.4 0.4 1 23 440 462 440 462 0.97

7 9 1.7e-05 0.0011 19.2 0.2 1 23 468 490 468 490 0.98

8 9 1.6e-07 1.1e-05 25.6 0.8 1 23 496 518 496 518 0.98

9 9 0.00012 0.0077 16.6 1.8 1 23 524 546 524 546 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	8.5	5.6e+02	1.3	1.1	2	17	12	27	11	28	0.88
2	9	5.1e-05	0.0034	17.7	7.8	1	23	328	350	328	350	0.98
3	9	1.8e-05	0.0012	19.2	2.9	1	23	356	378	356	378	0.99
4	9	1.1e-05	0.00074	19.8	2.0	1	23	384	406	384	406	0.98
5	9	3.3e-05	0.0022	18.3	2.6	1	23	412	434	412	434	0.99
6	9	6.6e-05	0.0044	17.4	0.4	1	23	440	462	440	462	0.97
7	9	1.7e-05	0.0011	19.2	0.2	1	23	468	490	468	490	0.98
8	9	1.6e-07	1.1e-05	25.6	0.8	1	23	496	518	496	518	0.98
9	9	0.00012	0.0077	16.6	1.8	1	23	524	546	524	546	0.99

Sequence Information

Coding Sequence: ATGAGCGGCAACAAAGCAGGCGGCGTCGTGCTCAATTGCCGCACTTGCACCCGGGCATGTAAACAATACAAGGCGCTGCAGGACGAGATCGAGATCGGCCCCGAGGGCAGCACAACGCTTTCCCACATGCTCAACTACTGCTCCAGCTTGTCGTTCGAGCCGCAAGATGGCGCCTCGATGCCCCAACACATTTGCCTGCACTGCCTTCAGCTGCTGGAGCAGGCATTCAACTTCAAGCGCATGGTCATCGACTCCGACGAACTGTTGCGCCTGGGTCTCGAGGAGGTGGACAATAACAACTgccacggcaacaacaacaaaaacaacaacatcaacaacaacagcagctgcagctccgaTGCCACTGCCGCCGTTGCCAACGAGGAGTACGTGATGATTGAGCTGCTCGATGGCAATGCGGCTGAAGCGGCGGACACAGCGAAAACGAATTCGGGATCACACGATGTGGGGGCGCTGGTCGAGACGTACAGCGAACAGGAGCAGCCCGAGCAGGAGTATGTGGTAGAGGAGGTGACGGAGACGGAACTGGACGAGGAGCTGGACACCGAGACGGATGATGCCATTGAATCGCTGACTGACTTTCAACCCGCTGACATTGAGTATGTGACCATTAAAACCGAATACGATTCCCAGctggacgaggacgaggaggaggagggcgaCGGCGAGGTGGACGAAGACGAGGAGGACGATGACATTGAGGTGATGGTGGACGAGCCACAGCTGGAGTCGGTGGGCGAGCAAATTGAGCTGCACATGCTGGACGATCAAATGGTCATCATAACGGACGAGCAGCAAATCGAGCAGGTTATGGGCGATGACATGCTGGACATGGAGCGCGAAGAGCACTTGTTGACGGGCGACAGCGAGGAGGGCGAAGATTTCCTGGACGATTCGCTCGATGAGAGCGctgtgcagcaacagcagacaaCTGTGAACGCTGTCGGCGAAGTGCTGCCCCATGTCTGTCATGTGTGCAACAAGGCGTTCCGGCAGCAGTGCCGCCTCAACCAGCACATGCGCTCCCACGTCGACGAGAAGCTCTACACCTGCGAGGTGTGCGGCAAGAAGCTGAAGCATCTGCGCAACTACAAGGAGCACATGCTGACGCACACCAACGTCAAGCCGCATCAGTGCCTGGTCTGTGAGCGCTTCTATCGCACCACCTCCAGCCTGGCCGCCCACATGCGCACCCATGCCGAGGACAAGCCCTACAAGTGCGATCAATGCGGTCGCAGCTACGCGGCCTTCGATCATCTGCGGCGCCACAAGCTGACGCACACCGGCGAGCGTCCCTATGCCTGTGATCTATGCGAAAAGGCGTATTACGATTCGTCGTCGCTGCGCCAGCACAAGATCAGTCACACCGGCGAGAAGGCCTTCACCTGTGAGATCTGTGGCGTTGGCCTCTCCCAGAAGTCCGGCTACAAGAAGCACATGCTGGTGCATTCCGGCGAGAAGCCGCACAAATGCCCGATCTGCGGACGCGCCTTCACTTTCACCAGCAATCTGAATGCTCATGTCCGGTTGCATTCGGGTGAGAAGCCCTTCAAATGTGACAAGTGCATGAAGGCGTTCCCCACCAAAAAACGACTCAATAGCCATCTTCGTGTGCACAACAAGGAGGCGCCCGTCACCGCCACCATTGGCAGCAGTGGCCAGCAACTTGCCACCGGCAATGCGCAGTCGCAATCACAGTCGCTGGGTGCCGCCGCCGGACGCCGCTCGGCAGCGCACATGACAACAGCCACAATGCCCGATGTCAGCGACCAGCAGGTCTCCACATCCAAGGTTGTTGTGGTACTCTAA
Protein Sequence: MSGNKAGGVVLNCRTCTRACKQYKALQDEIEIGPEGSTTLSHMLNYCSSLSFEPQDGASMPQHICLHCLQLLEQAFNFKRMVIDSDELLRLGLEEVDNNNCHGNNNKNNNINNNSSCSSDATAAVANEEYVMIELLDGNAAEAADTAKTNSGSHDVGALVETYSEQEQPEQEYVVEEVTETELDEELDTETDDAIESLTDFQPADIEYVTIKTEYDSQLDEDEEEEGDGEVDEDEEDDDIEVMVDEPQLESVGEQIELHMLDDQMVIITDEQQIEQVMGDDMLDMEREEHLLTGDSEEGEDFLDDSLDESAVQQQQTTVNAVGEVLPHVCHVCNKAFRQQCRLNQHMRSHVDEKLYTCEVCGKKLKHLRNYKEHMLTHTNVKPHQCLVCERFYRTTSSLAAHMRTHAEDKPYKCDQCGRSYAAFDHLRRHKLTHTGERPYACDLCEKAYYDSSSLRQHKISHTGEKAFTCEICGVGLSQKSGYKKHMLVHSGEKPHKCPICGRAFTFTSNLNAHVRLHSGEKPFKCDKCMKAFPTKKRLNSHLRVHNKEAPVTATIGSSGQQLATGNAQSQSQSLGAAAGRRSAAHMTTATMPDVSDQQVSTSKVVVVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00509252;
90% Identity: iTF_00509252;
80% Identity: -