Dhis002099.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila histrio
Gene Symbol
pnr
Assembly
GCA_958299025.2
Location
OY282580.2:19500049-19504871[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1 4.5e+03 -2.4 0.3 18 25 62 69 58 69 0.72
2 2 1.3e-16 2.9e-13 49.4 2.5 1 35 623 656 623 657 0.98

Sequence Information

Coding Sequence
atgtataatgtACCACATAAGTATCGCCAAGTTTGTCGATTGTGCCTCACTTTGGTTAATGAGTGCGATATCGCAGATCTACAAATTTACAATAGTGAGACAGGCGCAAATGAAACAGTTAGtagcagccaacaacaacaacaacatcagttATACGTCAATCAGTGCAATATTCGTGAAAATGCATCCAAATGCGTCTGTAATGCCTTGGACCCAAATACATGTTGCTGCCAATGTGATAACCCGTTATCAGCAGCAGTGCAAAGCAGCAATAATGAAGTGTCCCCATGCAATCCTCAACatcaaaaaaacaattacacaCCGAGTGTGCCTTCGCCTTCGCCTTCTGCTACTGCTATTGCCAACCCGCCATGCacaattgaaaacaatatgTATGCTCGCATGTTTTCCAATCAAAATCATCAAAATAGGCTGCAAACTcagcaacaaccaacaacagcattaCATTTACAATTTCCAACACAAGACGTACAATcgcaaaaagaaacaataaacGATACAGTAAATACAATTGGCCAGGAGGAGCAACAATTTATACAAGATAATGCAAAAGCGACTTTAACAAAACATGTATTTCTTCATGATATCGGCGAAAATACTTCAAGCAACGAAAATTACAATCAAGAGCATAAAGATGATTCATCACCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGCCATTACCGAATGATGGATACCCTTCAATAATATGCCGTGAGTGCCGGATAAAGCTTGAATCGTTTTGGAAGTTTCGCAACATGGCGCTAAATTCACATTTTGCTTTAAGAGAATTTGTAGCAATATCGGAATCGTCGAAGCTTgATTCAAATCATTTGGAAACAAAACTCGATGAAATTTTAAAGTCAACATCCGAGGCAATAGCGGCAAAGGCACTGACTGAACTGAGCAAATCTTCAAAAACAAGATATAGCCAACGGCATACGAAACTTGATGATACAAGTATTAAAAGTTCTGTGATAAAATCAAAACGTCCATCAATCGATAATGAGATGCAAGATAGCGTTGAAATCGACTTATCCgtgaaaaagaagaaaaatgaatattCCACTGAACGGAATTTAGCcccaacaataataacatcaacatcaacaacaacatcatcatcatcatcatcatcaacaataGGAACAACAGGAACTGGAAAAGCGCGTAACACATTTGGCCAACCTCCAATACTTGATATCCATGCGAATCCTATAAGGATTGATGGCGATCTTAAGAATTATAGTATTACTATTAATGAAGTTGGCTCGTCTAGTTATCAATTGAACACAAAGAAACTAAATACCGACAGTATTGCAACTACTTGTCTATCGGACTCTGAGGACAGCTCTGATTCGAATAAACTAGAAATGGATATTGCATCTGCTATGAATGATAGAAAGACTCCGGAGAGTGTAAATTCTGATCATGCAACAGATGCAGCGACGACACAATTGTGGCAAGCATTGGCACGTTCCGCTGccAAAACTAAAGAGGAAAGTCGAGCATCGCAATTATTGCGAAACATGATGAGTCAAACTTTTGTATTTCCCGTGCCGTCTACCATAGCATTGACAAAAGTACCTGAAGAACCAATACCACTTTTAAAGGATATGTCTGAATCTCAATCGAGTGTTGTCAAAATATGTAGAAGAAAGCAAAGTTTTCCTACAAAAACAGATTGCATCGAGTCTCCAGATATTAAGGTGACCGATACTTTCGTTCGTTCCGAAAGTGTATCAAATACATTGACAGAAGGAATCAAAGACAAAAAGAGCctaaaatgcaacagcagcaatagtgCTTTGTCTACATCACAAAAGGATATGTCTTGCTCGAATTGTGGCacgctaacaacaacaatttggaGACGTAGTGTCAGAGGGGAAATGGTTTGCAACGCTTGCGGATTGTACTTTAAGTTACATGGCGTAAATAGACCACATTCTATGCGACGTGATACCATCCATACCCGGCGCAGGCGTCCAAAAGAATGCGAGAAATCGAAGAAAAgAAATCGGCAATTACCCTGCAATTCGGCGGTAGATTATGAAACGCATAACATTAGTAGTCCCGTGGAATGCAAGAAGCTGGATTTATCGATAAATCAGGAAACACTCAGTATTTCAGATATAGTGTTTAACAAATACAAAACGGAATTATCTGAAACAGGAGGAGCGGCAGCAACACTAAAAGATGTTATTTTAAAACGGAAAAAATCACAATCTTTGCCTGAGTTTAATGATACCTGCGAAGGCGAGGAACTATCTGTACCTCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATACAAcgccaaataa
Protein Sequence
MYNVPHKYRQVCRLCLTLVNECDIADLQIYNSETGANETVSSSQQQQQHQLYVNQCNIRENASKCVCNALDPNTCCCQCDNPLSAAVQSSNNEVSPCNPQHQKNNYTPSVPSPSPSATAIANPPCTIENNMYARMFSNQNHQNRLQTQQQPTTALHLQFPTQDVQSQKETINDTVNTIGQEEQQFIQDNAKATLTKHVFLHDIGENTSSNENYNQEHKDDSSPHITIQIFNCLSIKPLPNDGYPSIICRECRIKLESFWKFRNMALNSHFALREFVAISESSKLDSNHLETKLDEILKSTSEAIAAKALTELSKSSKTRYSQRHTKLDDTSIKSSVIKSKRPSIDNEMQDSVEIDLSVKKKKNEYSTERNLAPTIITSTSTTTSSSSSSSTIGTTGTGKARNTFGQPPILDIHANPIRIDGDLKNYSITINEVGSSSYQLNTKKLNTDSIATTCLSDSEDSSDSNKLEMDIASAMNDRKTPESVNSDHATDAATTQLWQALARSAAKTKEESRASQLLRNMMSQTFVFPVPSTIALTKVPEEPIPLLKDMSESQSSVVKICRRKQSFPTKTDCIESPDIKVTDTFVRSESVSNTLTEGIKDKKSLKCNSSNSALSTSQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQLPCNSAVDYETHNISSPVECKKLDLSINQETLSISDIVFNKYKTELSETGGAAATLKDVILKRKKSQSLPEFNDTCEGEELSVPLNLVSSENNAKLTYNAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-