Basic Information

Insect: Drosophila histrio
Gene Symbol: -
Assembly: GCA_958299025.2
Location: OY729166.1:12317314-12319945[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.089 7 7.6 4.0 1 23 260 282 260 282 0.97

2 11 1.4e-05 0.0011 19.5 0.5 1 23 288 310 288 310 0.99

3 11 0.00026 0.021 15.6 4.8 1 23 316 339 316 339 0.97

4 11 0.38 30 5.6 3.8 1 20 345 364 345 367 0.95

5 11 0.0094 0.74 10.7 1.7 1 23 373 395 373 395 0.97

6 11 4.4e-05 0.0034 18.0 1.2 1 23 401 423 401 423 0.98

7 11 0.00024 0.019 15.7 1.9 1 23 431 454 431 454 0.96

8 11 0.0012 0.092 13.5 0.7 2 23 461 482 460 482 0.96

9 11 0.00023 0.018 15.8 1.2 1 23 488 510 488 510 0.98

10 11 0.00035 0.027 15.2 1.3 1 23 516 539 516 539 0.95

11 11 2.3e-06 0.00018 22.0 3.7 1 23 553 575 553 575 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.089	7	7.6	4.0	1	23	260	282	260	282	0.97
2	11	1.4e-05	0.0011	19.5	0.5	1	23	288	310	288	310	0.99
3	11	0.00026	0.021	15.6	4.8	1	23	316	339	316	339	0.97
4	11	0.38	30	5.6	3.8	1	20	345	364	345	367	0.95
5	11	0.0094	0.74	10.7	1.7	1	23	373	395	373	395	0.97
6	11	4.4e-05	0.0034	18.0	1.2	1	23	401	423	401	423	0.98
7	11	0.00024	0.019	15.7	1.9	1	23	431	454	431	454	0.96
8	11	0.0012	0.092	13.5	0.7	2	23	461	482	460	482	0.96
9	11	0.00023	0.018	15.8	1.2	1	23	488	510	488	510	0.98
10	11	0.00035	0.027	15.2	1.3	1	23	516	539	516	539	0.95
11	11	2.3e-06	0.00018	22.0	3.7	1	23	553	575	553	575	0.97

Sequence Information

Coding Sequence: ATGTCAAAACGCAAACGTGACTCCGATTCAGAGGATTTGCAATCCTTTCTCATGAATTTTCACAAGGAAATTGAGGATGGCGGCGCTGAAGGCAAAAATGCCAAGGAAAATGGCAGTGTGATGGATGTTGctgaggaagaagaagagcaagaTGATGAAGATAAGTACTTTATTGACGACGAAGGTAACTGCTATATTAAAACAACGGTGCAGCCAAAACTCAACAAGAACAAGCCAAAACCACCGGTAACCTCAACACCAGCACCGATTACTGTACGCAGCACTAAAAGATTTAGCGGCCCAAATGCTGCGAAAGCTATTAATCTGCGCCCAGCCAAATCCAAGCCGGAAGTGACGCCGCAAAAGACGCAGAAACCGAAAGCCACGCCCAAAGCAGTTCATACCATTCCACTTCTCCGGAAAAGGCCGGTGACGGTgactaaaacaacaactccTGTCGAGGCTCTCAAGGCTTATTTACGTCCAGCGAAGGCAAAGTCCACAGTAGAGATACCCGATGAAGTGGAGGTGAAAAATCTGGACGAACTCGAGGAGTTTATAGATGAACCAAGTATCGTTAATAAGACCAAAACTTCCCAAATCGATCTGAATGAAACAAATGATACTGCTGGAATTAATGAGTCCAACGACGATGAAGTCTTTGAGTTTGATGATAATTCAGCCAACGTGTCTGCTAAGCCAGACGTGGACTTTGTGCTATCCGGCAAGGAGTACAAACTGAAGGCAGTGCCGACGCAGTCCGCCGAATCGCACAAGTTCGCCTGCTCCCACTGCAGCTACACGACCAACAAGAAGTTCCTCATCTCCCGACATGTGCGCTCCCACGACGGAGAGTTTTCGTTCAAGTGCTCGATCTGTGAGCGCGGCTTCAAGTCTAACATGGGATTGGTGAATCATCTAAACACGCACATGGGCAACAAGCCGCACAAGTGTAAGCATTGCGAGAGTGCATTTACGACCAGTGGAGAACTTATACGCCATACACGCTATAAGCACACAAAGGAGAAGCCTCACAAATGCACCGAATGCAGTTACGCCAGCGTCGAGTTGACCAAGCTGCGGCGTCACATGACGTGCCATACGGGCGAGCGTCCGTATCAGTGTCCACACTGCACATACGCCTCACAGGACATGTTCAAGTTGAAGCGTCATCTGGTGATCCATACGGGCGAGAAGAAGTATCAGTGTGACATCTGCAAGTCGCGATTCACGCAATCGAACTCGCTTAAGGCACACAAGTTGATTCACAGCGTGGTGGACAAGCCGGTCTTTCAGTGCACGCTCTGTCCCACCACATGTGGCCGTAAAGCCGATCTACGCACCCACATGACCAATATGCACACCTCGGACAAGCCGCTGATTTGCAAGCGTTGTGGCCAAGAACTAAGCGATCGTTATCAGTACAAGCTGCACATTAAGTCACACGAGGGCGAGAAATGCTATCGCTGTAATCTGTGCAGCTATGCATCCGTATCGCAACGGCATCTGGAGTCCCACATGCTCATTCACACCGACACGAAGCCCTTCAAATGTGATCTGTGTGCCCAGGCATTCCGACAGCGTCAATTGCTGCGACGTCATAAAAATCTAATGCACAATGAGGACTATAAGCCGCCGGAGCCACGAGAGAAGGTGCACTCCTGTCCCAGCTGCTCCAGGGTCTTCACCCACAAGGGCAACCTGATGCGGCACATGGAGACACACGACGAAACACTCAATGCACGCGAGGAGAAGCTGAGACTTAAATTGGGACGCAACGTTCGTCTGCAGCCAGATGGCAGCATTGTGACTTTAGTGAATGGCACTGACCTCAACATACTGGAAAAGAATGAAGATACCTCTATTGACATGGATGATCAATATGAGATCTCAGAACTGGACGAATTggaagaagaggaggaggaggaagaggcaAGCAGTGAAGATATCGTGGAAACTGCGCCAAGAAAGAGAAACGCAACCAACACAGTCGTAATAAGGGAGCGTGAGCAGAGATCCAAGCCCATAATTATTAATCGTCAACTGAAGGTGCCTCGTGTCCATCGCGAGGTGACAACGCAAGCTGGAACATTTCGCATTAAGGAGGAACCGGATGCCAATGAATTTACCGTGGAACTACAGGGTGAAGAAAATGAGTTTATGGTCGTCCAGCTGGTCAACGATGATAATGAAGTAGTGGTCAAACGTGAACCGAACACGCAGAAGATTAATGCCGCCAATTGTTTTGGCTTCGAGGATGATGCTGAAACGGAATTCGAGGAGTATGTTGATCCCGTGGCCGAAGTTGATGCCACATCACAGGAGTTTCTGCAACTGATGGACATGATTGAACAGGACACGTAG
Protein Sequence: MSKRKRDSDSEDLQSFLMNFHKEIEDGGAEGKNAKENGSVMDVAEEEEEQDDEDKYFIDDEGNCYIKTTVQPKLNKNKPKPPVTSTPAPITVRSTKRFSGPNAAKAINLRPAKSKPEVTPQKTQKPKATPKAVHTIPLLRKRPVTVTKTTTPVEALKAYLRPAKAKSTVEIPDEVEVKNLDELEEFIDEPSIVNKTKTSQIDLNETNDTAGINESNDDEVFEFDDNSANVSAKPDVDFVLSGKEYKLKAVPTQSAESHKFACSHCSYTTNKKFLISRHVRSHDGEFSFKCSICERGFKSNMGLVNHLNTHMGNKPHKCKHCESAFTTSGELIRHTRYKHTKEKPHKCTECSYASVELTKLRRHMTCHTGERPYQCPHCTYASQDMFKLKRHLVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVVDKPVFQCTLCPTTCGRKADLRTHMTNMHTSDKPLICKRCGQELSDRYQYKLHIKSHEGEKCYRCNLCSYASVSQRHLESHMLIHTDTKPFKCDLCAQAFRQRQLLRRHKNLMHNEDYKPPEPREKVHSCPSCSRVFTHKGNLMRHMETHDETLNAREEKLRLKLGRNVRLQPDGSIVTLVNGTDLNILEKNEDTSIDMDDQYEISELDELEEEEEEEEASSEDIVETAPRKRNATNTVVIREREQRSKPIIINRQLKVPRVHREVTTQAGTFRIKEEPDANEFTVELQGEENEFMVVQLVNDDNEVVVKREPNTQKINAANCFGFEDDAETEFEEYVDPVAEVDATSQEFLQLMDMIEQDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -