Dhis018629.1
Basic Information
- Insect
- Drosophila histrio
- Gene Symbol
- bab2
- Assembly
- GCA_958299025.2
- Location
- OY729167.1:16062375-16064582[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-10 7.1e-07 29.1 0.0 1 44 410 453 410 454 0.91 2 2 8.6 1.9e+04 -4.3 0.9 4 18 561 574 561 574 0.76
Sequence Information
- Coding Sequence
- ATGGGCGGACCGACGGCACCAGTGGCCAGCAGCGAAGGACAGACATATTGTCTGCGCTGGAACAATCATCAGACGAATCTTGTGCAGATTCTGCATGCTCTGCACGAGGTTGGCAGCTATGTGGACTGCACCCTGGTCGTCGACGATGAACAGTTCAAGGCGCATCGCGTTGTGCTCGCAGCCAATTCGCCATACTTTCAGGCCATTCTGCAGGATGTGCCGCAGGATCAGTGCAGCATCATATTGCCGGGTGTAAAGGGATTCGAAATTGCCGCCCTGCTGCAATACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGTCGGAGATTCTACGCACCGCCAAGGAACTGCAGGTCAAAGGTCTCTACGACAATCTAATGAAGTTCAATCACAAGGCAATCACAGCAGCTGCCTCGGCTGCCGAGGAGCGTTCCCAGAGCCATCAGTTTCAGGGCAGCACTCCAGCTGGACACCATCATCAGCCCACGTCCAGTTCGGGCGGCATGCCGCTCAATGGTTCATCGGATGGTGGTGCCTATGGACAGCAGCATAATTCCTCCTCCGTGATCTCAACATCTACGCATATTTCACCCAGTGCCGCCATCTCGAGCAGCTGCTCGCCACCTCCACCTCCGTTTGGTGCCTATCAGTCGCCGTACACGAGTTTTCCCGCCTCCTCAGGCGTGCCCATCAACATGAATGCCCACAGCACGCCCACTGGCGAAACTCCTCTGACTCCCACACACTCCACACCACATGCTGCAACCGCCGGGGAGGCCGGACAATGGCCACTTTCCCACTCCGCAGCCGCGGCTGCAATGCTGAATTCGGTTTACGAGTCGGCGGCAGACATGAATCCGCTGAAACGCAAGAAACTGTCGGCCATATCGAGCATGTTGCTCAATTCCACACGAGACACGCCCATTTTACGCAATGTACTTGCTCAAGCGAATCCGGCAGACTCCTCACAGCCGAATCCGCTAATGCTGCCGGGTGTCAAGAATGCGGGAGAGAAGACGCCAACACATCAGCACCAACATTCGCATCCCCATCAGCATCAATTGggcggcagtggcagtggaAGCGGAAGTGCTGCAGGCGCTGGCAGCCACAGTTTCAATGGATCCGACTATGGCGGCGATAAGGAGCCACTGTCACCCCACACAGATCGCTCCATGGACGAGGACAAGAAGCCGGAGTGGAAGCGCTACAAGCAATACACCCGAGCGGACATGATGTGCGCCATTCAGTGCGTCCGCGAAGGGATGAGCGCTCTGCAGGCCAGCCGGAAGTTCGGGTTACCCAGTCGCACGCTCTACGACAAGGTGCGTAAGTTGAACATCACCACGGGACGTGGCACACATCGCACGCCAAAGCGCAGTCCACCTGGTGTGGGGGGCGTCGAGTCCTCGGCAGCGTTTCCCTATTCTGCggctgcggcggcggcagcagctgcacaTAACTATGGACAGACGGAGCTGAAGCACGATCAGAAGGATGGTCAGCATGGTCTAGGTCAGGGAGCAGCGGGACACGCTCATCATGGCCATGGCCATGGCATGACACCAACAATTCCACACTCGGCAGCCGCTCTGCTGGATCACGCCTTTCTGCAGCAGGCTCTGGAGAATCGGGGCGGGGACATTGCCGGCCGGGAGGCGCTACATGCCATGGCCTTGGCGGCAGCTGCTCATGCGGCCGTCAATCGCATGTCCAACAGTCCGCCGGGCTCCAATGAACATCTGGCTGCCCGTTCTCCTGGCCATTATGCCGAGCCGGAGGAGAAACACGGCCAGGCGCTGATCAAACGGGAGGCCATTGAGGAGGAGCGAGATGCCGACGATGAGGATGATCATGATCAGGTGGAGGATCTGTCGCTGCAGCGCAAAGAACGTCCCGAGTCACCATACTCGCCACATCCGCCACGTGCCTCATCGCCGCTGGAAAGTGCCAGTGTCATTATGCACTCCTCGAACTCGGCGTCGGTTTCTACCAACGGCAAGGAGTCCCACGATCTGGAGCCAGAACAGGAGCACGAGCAGGAGCATGAGTTGGATGATTATAATGAGGTGACATCGCCAGCTGCCGCTCCAGCTCCAGTCTCGCACTTGGGCATGGGTTTGGGATTGGGACTCGGATTGGGCATGGGTTTGAAACGGGAGCTGCTTGGCAGCGATGAGGCTCAGGCCCGCACCGACTGA
- Protein Sequence
- MGGPTAPVASSEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQDVPQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQESEILRTAKELQVKGLYDNLMKFNHKAITAAASAAEERSQSHQFQGSTPAGHHHQPTSSSGGMPLNGSSDGGAYGQQHNSSSVISTSTHISPSAAISSSCSPPPPPFGAYQSPYTSFPASSGVPINMNAHSTPTGETPLTPTHSTPHAATAGEAGQWPLSHSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANPADSSQPNPLMLPGVKNAGEKTPTHQHQHSHPHQHQLGGSGSGSGSAAGAGSHSFNGSDYGGDKEPLSPHTDRSMDEDKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVGGVESSAAFPYSAAAAAAAAAHNYGQTELKHDQKDGQHGLGQGAAGHAHHGHGHGMTPTIPHSAAALLDHAFLQQALENRGGDIAGREALHAMALAAAAHAAVNRMSNSPPGSNEHLAARSPGHYAEPEEKHGQALIKREAIEEERDADDEDDHDQVEDLSLQRKERPESPYSPHPPRASSPLESASVIMHSSNSASVSTNGKESHDLEPEQEHEQEHELDDYNEVTSPAAAPAPVSHLGMGLGLGLGLGMGLKRELLGSDEAQARTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802934;
- 90% Identity
- iTF_00519246;
- 80% Identity
- iTF_00519246;