Basic Information

Gene Symbol
ct
Assembly
GCA_958299025.2
Location
OY282582.1:24545238-24581005[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7e-27 7.6e-23 80.6 0.0 3 72 1139 1209 1137 1214 0.95
2 3 6.9e-32 7.6e-28 96.6 0.0 3 77 1630 1705 1628 1707 0.96
3 3 4.3e-31 4.6e-27 94.1 0.0 3 76 1903 1977 1901 1980 0.96

Sequence Information

Coding Sequence
ATGTTAAGTTGCAACCTTAAGCGCGCTACTTTAGCCGAGAAGGAAGTGAATACACTCAAGGAGCAACTATCCACTAGCACGCccggcagcaacagcgacagcaacagcaacagcgacaacaataacacaacaacaggaacaacaacaacaacaacagcaacagaagcaacagcagcagcagcgacattAATCGGCGGTGAGGAGGAAGCCACTGGTAATAGTGAAACCGATAGCGACAAGCTGCTGAATAGCTCCATTGTTGCAGCGGCCATAACGCTGCAACAGAACGGCGGCAATCTGCTGGCCAATACAAATACACCGTCGCCATCGCCGCCGTTGCTGAGCgccgagcagcagcaacagttgcagagCAGCCTGCAGAACGGCGTCGGCGGCGCTTGTCTCAATCCGAAGCTCTTCTTTAATCACGCACAGCAAATGATGATGGaggcggcagctgctgctgctgctgcggcggctgcagctgcagcggcagcacaacaacagcaacaacaacagcaacaatcgcCAATGCACTCACCCGCTGCCGCAGCCAACAAtacacaagcaacaacagttgcaacaaacacatcaacagcagcaagtgcAACAGCAAGTGCAGCACATCAGCAGCAAGCAATACGCGATATTGGCGCtgaggcaacaacagcaagcaattgcaatgacgatgacgacgatgatgatgaggaggaggatgcATCGATGCAGTCAAATGTTGCACATGCCGATGGTGAactcgatgatgatgatatggAGCTGGAGCCAGAGCATGTTGCTGCTGAGACTGGCaatgttgctgccgttgccgctgaTTCATCAGCAAGAACTGATAATATTGCCGATGTGACGGCAACGCAACGTGTTGCTGCGGTCGccgatgatgataatgatgatgatgacgatgacgatgatgatgatgatgttgctgatgaGCATAGAGAGGAgcatcatgatgatgatgatgaggaagCTAGTTTAAATGTTAGCAATaatcataacaacaacaataccgATAGCTGTAGTCgaaggaacaacaacaacaacaacagtgagaCGCAACATGTTGCACTGcgtgataataataatgtaaatgaGCAACATGTGGCACATAGCGTTGAGGACGAGGATTgcaccaacaataacaatactaacaacaacaacaacaataataataacaacagcaatgagAAGCGCAAAAAAcgcaacgccagcaacaacaacaacaacaacaaccagcccGCTGTTCTATTAGCTGCCAAAGACAAAGAGATTAAAGCACTTTTGGATGAGTTGCAACGCCTACGCGCTCTGGAGCAAACTCACCTTGTACAAATCCAGAGGCTCGAGGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGATTGGAGGCGCGTTTGGATAAGCAACAGATCAATGAGGCATTGGCCGAGGCAACTGCATTGGCGGCCGCTGTTAAtgcggcagcaacaaataataataacaacaataacaacaatagcaatagcaatatcaataataataacaacagcaacaacaataacaacgatcACAGTAGCCAGAGCAGTGAGAACAACAACGAATCAACATCAGCGACAGTGTTTAAATCAACAACAGATCTTACATCGACTCATCATCAGCacaatgacgatgatgacgatgatgatgataatgatcaTGATAATGAACTGCgggatgctgatgatgatgaagatatGGAAATTACAGGCaatgagcaacagcaacagcagcaacaacaacaacaacaaaatgcagtTGCTAACAATCGGCATGATGAGGATAACGATGATGAGGAGGTCGAGGAGCAGGATGCCGAAATGTCCAATGCCACAGTCACAGCGGAAAATAATGAGCTGAAAATCAAAAAGGAGCAGCACAGTCCACTGGATCTGAACGTGCTCAGTCCACAGTCGGCCCTGGCCGCTGCCGCCGCGGCCGCAGCAGCCGCTGCCTGCGCCAACGATCCGAACAAGTTCCAAGCCTTGCTCCTGGAACGCACCAAGGCGTTGGCGGCCGAGGCGCTTAAGAATGGCGCCAGTGATGCGTCTATTGCCAATAGCGATGAACAACAACGTGCAacagaggcagcaacagctgaacgcgtggcagcaacagatgaagaagaagcagcagccaAGTCACAGCCTGAAACAAGCAAAAATGAAACGAAGGAGACGCATGAAAATGAAACATTGCCCGATGTCAATTTGCAGCCAAAAGTCGAAATCATTGACACTGACGATGCCGATGATGGCAACCCTGCCAACCCGAGGGTTGAGGCGGCAGGTCAAACGCTGGAAGAACAGCTGGTCAATAGCTATTGGAGGCGTGGCTTTGAAGCgagcacaacagcagcagcagccgcagcagcagcagcagttgttgcagcaacagggAGCAAAACGCCAACAATTTATCAAAATGCCAATGCGgtacagcagcaactgttgccgccaccgccaccaccgccgccgccgccacagcagcagcaacaacagcaacagcactttgccacgcaacaacaacaacaacaacagcaacactatcagcaacaacaacaacaacaacagcaacatggaCCCTCGTCCACTGTGCTACTCAGTCAATTGGTTAACTCAACTTTCTCACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCAACTCGCCTAGATGCCGGACCACACCACCAACTTcagcaccagcaccagcattcacaccagcaacagcaacaacagcagcagcagcagcaattactgcaacagcaacatcatcataacagcagcaatagcagcaacagcagcgcacCGGGCAGCGATCCATTgaaccatcatcatcatgcgCATCATCACGCCCATGGGCATGGTCAGTTGTTGCATGCGGCGCATCATTTGCATCATGGTGGCGACTCCAATTCATCTAGCGCCAACAGTACACCAAACAGCACCGCACAGTTGGCGGCAAGTATTGCCAATACGTTGAACGGCAACAAGTCACTGTTGCAAGCAGCAGCCGCTGCCAATGTGGCTGCCGCCGCTGTCGCCGTTGCCGaggacaataacaacagtcTGACGCCAAATGCGAAtgccgcagctgctgcagcggcAATGGCAGCACATGCCCAGCATGCCGCCGCCTTGGGTGCCCCAAGTTTCTTGCCCAATTTGCCCAGTTTGCCGGCATTCCAAtttgccgccgccgcagccGCTGGACAGGAGGCACGGGCGCATTTCCGCTTTGCAGATGCtgaactgcaattgcaaccGGGTGTCTCGATGGCCGGTCGCTTGGGTGAGTCTCTCATACCCAAGGGTGATCCCATGGAGGCCAAACTCCAAGAGATGCTGCGCTACAACATGGACAAGTATGCGAATCAAGCGCTCGACACACTTCACATTTCGCGACGTGTTCGTGAACTGTTGTCGGTGCACAACATTGGCCAACGTCTGTTTGCCAAATACATTTTGGGATTGTCGCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCAAAGCCCTGGGATAAGCTGACCGAGAAGGGTCGTGACAGCTACCGCAAGATGCATGCCTGGGCCTGTGATGATAACGCCGTCATGCTGCTCAAGTCGCTCATACCCAAGAAAGATTCGGGACTGCCACAGTATGCTGGTCGCGGCGCTGGCGGCGATGATTCCATGTCTGAGGATCGCATTGCCCACATACTCAGCGAGGCATCGTCTCTCATGAAAAGCAACGCGGCAGCcgcccagcaacaacaacaggagcacCAACGTCGTCATATTGCCGCCGATGATACGCACAGCAATGAGGATAGCAAATCGCCGCATCAGAGTTGCAGCTCACCATTCTACAAGGTCGAACAGCAGctgaagcaacagcagcaacagcagcaacagcaacagcagcaacagttgcacgTCTCGGAGCATGCGCAACGGGAGCAACGTGAAGCGGCTGCAGCAGcggctgccgttgccgttcatcagcagcagcagcagcagcagcgcgaACAGCGGGAGCAGCGGGAGGCGGCACAgcgggagcagcagcagcgtatGCGCCACGAGGATTTGGCGCAGGACAAGATGGCGCGTCTGTATCAGGAACTGATGGCCCGCACTCCGCGTGAAGCAACCTTCCCAAGCTTTTTGTTGTCGCCGTTCTTTGCTGGCGCCGCCGGCATGCCTGGAGCAGCGGCTAATCCATTCCCCGCGGCAATGGCCGCCGATGAGAATATGCGACATGCGTTTGAGCGGGAAATCGccaagttgcagcaacaacatcagcagcaggcGCAGGCCGCCAGTTTTCCCAACTTTTCCAGTTTAATGGCACTGCAGCAGCAGGTGTTGAATGGGGCACAGGATCTATCGCTGGCCGGCAAGGACATCAAGTTGAATGGCCAACGATCGTCGTTGGATCAacacagcggcagcagcagcagcaaggaCGGCGAACGTGGCGACGATGATCGCAGCAGTTTTGCAGCCTTGCCACATGCCCGTAAATCGGATGGCGGCAATACACCGGCACCGCCAGCACCACCAGCACCGCCAGCACCACCGAACAGCGGCAATCCCAATGGGCCGGCAAATAATGCAGCTGTTGCCGGCAGCGGCAATCACGGCAGCAACTCAGCAGCGCCGAGTCCACTGAGCAACTCAATCTTGCCCCCAGCGTTGAGCAGCCAGGGGGAGGAGTTTGCGGCAACAGCAAGTCCGTTGCAACGCATGGCATCCATTACCAATTCGTTGATCACACAGCCACCAGTAACGCCGCATCATTCGCAGCCACAGCGACCCACCAAGGCGGTCTTGCCACCGATAACACAGCAACAGTTCGATATGTTCAACAATCTGAACACCGAGGACATTGTGCGTCGCGTCAAGGAGGCGCTGTCGCAATACAGCATCTCACAGCGTCTGTTCGGTGAGTCTGTGCTGGGTTTGTCACAGGGCTCCGTCTCGGATCTGCTGGCCCGGCCCAAGCCCTGGCATATGTTGACCCAAAAGGGCCGCGAGCCCTTTATACGCATGAAGATGTTCCTCGAGGACGAGAATGCGGTGCACAAACTGGTGGCAAGTCAGTATAAGATTGCGCCCGAGAAACTAATGCGCACGGGCAGTTATAGTGGCAGTCCGCAGATGCCACAGGGATTGGCCAACAAGATGCAGGCAACACTGCCCATGCAGAAGATGATGAATGAGCTGAAGTTACAGGAGCCGGCGCAGGCGCAGCATATTATGCAACAAATGCAGGCAGCCGCCGCAATGTCAGCGgcaatgcaacagcaacaagcagcTGCCGCACAAGCTGCGGCCGTGCAACAGGCGCAAGCTCAGGCCGTGCAAGCGGTGCAgagtcagcagcaacagcagcagcaacagcaacaacagcaggtgGCACAGCAGCAGGCACAGTTGTTGCATCATCAGAACATGTTGCTGACATCGCCGGGTTTGCCGCCGCAACACGCAATCAGCTTGCCGGCAGCAAATACGCCCAGCGGCCAGTCGAGTGGCAATTCGACGATAGGCGTTGTCACGCCCATCAGTGGCGAAAAGAAGCCAATGATGATGCCCGTGCACGGTGGGGCACATGCACCAAATGCGATGCGCAGCTTACACCAACACATGTCGCCCACGGTCTATGAGATGGCGGCATTGACCCAAGATCTAGATACGCACGACATTACCACAAAGATCAAGGAAGCACTGCTGGCCAACAATATTGGCCAGAAGATCTTTGGCGAGGCAGTGCTCGGCTTGTCGCAGGGCTCCGTCTCGGAGTTGCTCAGCAAACCGAAGCCCTGGCACATGCTGTCGATCAAGGGACGCGAACCCTTCATTCGCATGCAATTGTGGCTGAGCGATGCCAACAATGTGGAGCGATTGCAGCTGCTGAAGAACGAGCGGAGGGAGGCGAGCAAACGGCGACGCAGCACAGGACCAAATCAACAGGACAACAGCAGCGATACGTCCAGCAATGATACGAATGACTTCTATACAAGCAGCCCGGGACCTGGTTCTGTGGGCTCCTCGGTTGGCGGAGCACCGCCCAGCAAGAAACAGCGCGTCCTCTTCTCCGAGGAACAAAAGGAGGCACTGCGTTTGGCCTTCGCCCTCGATCCGTATCCCAATGTCGGCACCATTGAGTTTCTGGCCAACGAGCTGAGTCTGGCCACCCGGACAATTACCAATTGGTTCCACAATCATCGCATGCGATTGAAGCAACAGGTGCCGCACGGCCAGCCCGGTCAGGATAATCCGATACCCAGTCGCGAGAATACAAATGCCACACCCTTCGATCCCGTCCAGTTTCGCATTCTGCTGCAGCAGCGTCTCGTCGAGCTGCACAAAGAGCGCATGGGTTTGAGTGGTGCGCCAATTCCCTACCCACCGTACTTTGCGGCCGCTGCTCTGCTGGGACGCAGTCTGGCCGGTATACCGGGCGCTGCGGCGGCAGCTGGCGCTGCGGCTGCGGCAGCCGCTGCTGTCGGTGCGGCAGGCGGCGACGAGTTGCAGGCATTGAATCAGGCCTTCAAGGAGCAGATGAGCGGCTTGGACCTGTCGATGCCGACGCTGAAGCGCGAACGCAGCGACGACTATCAGGATGAATTGGAGCTGGACGCCAGCGGCCATAACATGAGCGACAACGAGTCTATCGAGGGCGGACACGAGCCGGAGCACACGCCCATCTCTGACTATGAGAAGGCGTTGCAAAAGTCGGCGCTTGCCtcagctgccgccgctgccgcttaTATGAGCAATGCGGCACGCAGTTCGCGTCGCAAGCCCGCAGCACCGCAATGGGTTAATCCTGCTGGCGCTAGCACGCCGACAGCGGCGggagctgctgccgctgtggccgctgccgctgctgctgccgcggcTGCAGCCATTGCTGCCGGCGACAGCAGCGAACGCATTATCAATGGCGTCTGTGTCATGCAGGCGTCCGACTACAGTCGCGACGAAAGCGACAGCATTAAAGGCGCCAACGATGCGGACAATGATGAGCATGCTCAGCTAGAGATTGATCAGCGTTTCATGGAGCCTGAGGTGCGCATTAAGCAGGAGGAAGACGATGAGgatgagcagcagcaacagcagcagcaacaactgcagcagcagcagcagcaacaacagcagcagcaggaggaaaGCGCACGCCTTGACAGCGATGCGgcagagcagcagctgaaGGTGATCAACGAGGAGAAGTTGCGCCTGGTGCGTGTGCGGCGACTCAGCAGCAACGGCGAGGCCGGCGAGGAGCATTGTGCGGCAGCGCAGCAAGCGACGGCTGCAgcgacgccagcagcagcagctgctgcgtGGAACTACTAA
Protein Sequence
MLSCNLKRATLAEKEVNTLKEQLSTSTPGSNSDSNSNSDNNNTTTGTTTTTTATEATAAAATLIGGEEEATGNSETDSDKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQNGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAAAQQQQQQQQQSPMHSPAAAANNTQATTVATNTSTAASATASAAHQQQAIRDIGAEATTASNCNDDDDDDDEEEDASMQSNVAHADGELDDDDMELEPEHVAAETGNVAAVAADSSARTDNIADVTATQRVAAVADDDNDDDDDDDDDDDVADEHREEHHDDDDEEASLNVSNNHNNNNTDSCSRRNNNNNNSETQHVALRDNNNVNEQHVAHSVEDEDCTNNNNTNNNNNNNNNNSNEKRKKRNASNNNNNNNQPAVLLAAKDKEIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNNNNNSNSNINNNNNSNNNNNDHSSQSSENNNESTSATVFKSTTDLTSTHHQHNDDDDDDDDNDHDNELRDADDDEDMEITGNEQQQQQQQQQQQNAVANNRHDEDNDDEEVEEQDAEMSNATVTAENNELKIKKEQHSPLDLNVLSPQSALAAAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASDASIANSDEQQRATEAATAERVAATDEEEAAAKSQPETSKNETKETHENETLPDVNLQPKVEIIDTDDADDGNPANPRVEAAGQTLEEQLVNSYWRRGFEASTTAAAAAAAAAVVAATGSKTPTIYQNANAVQQQLLPPPPPPPPPPQQQQQQQQHFATQQQQQQQQHYQQQQQQQQQHGPSSTVLLSQLVNSTFSHANHSSCSNSKSTRLDAGPHHQLQHQHQHSHQQQQQQQQQQQLLQQQHHHNSSNSSNSSAPGSDPLNHHHHAHHHAHGHGQLLHAAHHLHHGGDSNSSSANSTPNSTAQLAASIANTLNGNKSLLQAAAAANVAAAAVAVAEDNNNSLTPNANAAAAAAAMAAHAQHAAALGAPSFLPNLPSLPAFQFAAAAAAGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRIAHILSEASSLMKSNAAAAQQQQQEHQRRHIAADDTHSNEDSKSPHQSCSSPFYKVEQQLKQQQQQQQQQQQQQLHVSEHAQREQREAAAAAAAVAVHQQQQQQQREQREQREAAQREQQQRMRHEDLAQDKMARLYQELMARTPREATFPSFLLSPFFAGAAGMPGAAANPFPAAMAADENMRHAFEREIAKLQQQHQQQAQAASFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSSLDQHSGSSSSKDGERGDDDRSSFAALPHARKSDGGNTPAPPAPPAPPAPPNSGNPNGPANNAAVAGSGNHGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQAAAAQAAAVQQAQAQAVQAVQSQQQQQQQQQQQQVAQQQAQLLHHQNMLLTSPGLPPQHAISLPAANTPSGQSSGNSTIGVVTPISGEKKPMMMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGHEPEHTPISDYEKALQKSALASAAAAAAYMSNAARSSRRKPAAPQWVNPAGASTPTAAGAAAAVAAAAAAAAAAAIAAGDSSERIINGVCVMQASDYSRDESDSIKGANDADNDEHAQLEIDQRFMEPEVRIKQEEDDEDEQQQQQQQQLQQQQQQQQQQQEESARLDSDAAEQQLKVINEEKLRLVRVRRLSSNGEAGEEHCAAAQQATAAATPAAAAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00495757;
90% Identity
iTF_00519057;
80% Identity
iTF_00519057;