Basic Information

Insect: Drosophila helvetica
Gene Symbol: jing
Assembly: GCA_963969585.1
Location: OZ018404.1:16820386-16829547[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00079 0.076 13.9 2.0 1 23 772 794 772 794 0.98

2 8 0.0002 0.019 15.9 1.4 1 23 826 848 826 848 0.97

3 8 0.19 18 6.5 0.4 1 19 856 873 856 879 0.81

4 8 0.00028 0.027 15.4 0.1 3 23 886 907 885 907 0.96

5 8 0.00026 0.025 15.5 3.5 1 23 913 935 913 935 0.97

6 8 0.017 1.6 9.7 0.2 1 23 942 965 942 965 0.95

7 8 0.00033 0.032 15.1 2.2 2 20 972 990 971 993 0.91

8 8 0.067 6.4 7.9 8.7 1 23 999 1022 999 1022 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00079	0.076	13.9	2.0	1	23	772	794	772	794	0.98
2	8	0.0002	0.019	15.9	1.4	1	23	826	848	826	848	0.97
3	8	0.19	18	6.5	0.4	1	19	856	873	856	879	0.81
4	8	0.00028	0.027	15.4	0.1	3	23	886	907	885	907	0.96
5	8	0.00026	0.025	15.5	3.5	1	23	913	935	913	935	0.97
6	8	0.017	1.6	9.7	0.2	1	23	942	965	942	965	0.95
7	8	0.00033	0.032	15.1	2.2	2	20	972	990	971	993	0.91
8	8	0.067	6.4	7.9	8.7	1	23	999	1022	999	1022	0.96

Sequence Information

Coding Sequence: atggatAACAAAACTAAACAGTTGGATTTTAAATTACTGGTGGATCAGTCACTAAATCTACTGGACAGCCTCAATACGGCATTGCGGTGCGATGCTATACAATTTTTGCTGCAGACGCTCAAGTGCAAATATCCGGACGCCTGCGACCAAGTCGTCAGGAATCTATTCAGTCACATAACCAATGATAATGGCGAAGGGCTGGCCGTGCAGCACGAGCTAGCGAAGAGCGaacagctccagcagctgctgctggtcaccaagaaagagaaaaaggaGAAGCAGGAGCCGGACAGCGGTGGCGACGGGACCGATGCAGAGATCAAGCGGGAGCATCATGTGGAAGAAGATGAGGAAGAGGAGGCGGGCTCTACAGATCTGAATCagaattttgagaaaattctCTGCAAAGAGGAGTTCCTGGGCCtcgacgacgaggaggaggaattCCTCCATGATGCGGACACTGAGAATTCGTCTTCCGTGCAATTCCACGCTGGCAACCATGTGGATGCACTCGGGCCTGGTGATCCTTTGGATCTGATACAAGGCGGTGGCTCACTCCTGGTCAAACGGAAGTACGAGGCAACTTTCGGAGccgaggaggatgaggaggatcACCTGGATGAGGATGCGGCGAACAGCAGCCccaacggcaacagcagccccaacggcaacagcagcgacagcaagCTGGTCAAGCGGATGCGAACGAACAACATGCACATGGCTGTGGCGGTTGGAGTGGGGGTGGAAGTGGGAGTGTCGAGTGTGAGGAGGAAAGAGGAGAGATCCAGCCTAGGCGAGGGCTACGTCTTCCACGAGGACAGCCAGTATACGCTGCGATATCACCACAGTACCGGAGAGTTCAGTGAGCGGGCTTTTAAGGCTCAGTTCCGTGCTCTGTTGCGCCTGGCGCTTAGTCAGCACCACAAGCCCTTCCTCAAGCAGTTCTACGAGAACTTTGTGGAGAATGGACGGCTGATGGGCACCACGCCCTCGACGAGAGTGTTGAAGGAGCTCCGGGACCAGCGATTGGAAGAGTGGCGGAGGCAGCGGGAGCGTCGTCAACTGGTCAGCCTACTGAAGCAAAATGAGATTCAGAAGCAGGAGATCCCAAAGCAGCAAGAGattgacgatgacgatgagcCCCTGCAACAGGATCGGGAGCAAGAGCCGGAGCgtgagcaggagcaggagcaagagCAGGAGCTGCCCCAACAACTGCCAGCCATCTCATTCGGCGACTCGGAGCTGGAATCGGAAACGGAATCACAGCTGTCGTCGGCAGCTCAAGAGATTATGAAGTTTGAAGAGTTCATTGACGACGGTGTAGGCGCAGGACGTCTTATCGATGGTCTGGAAATGGAGCCGGAGATAGATGACATGCTCGCTGGCGCTGGCAGTGCACTGTGCAGCGTAAACAGTGCGAGCGggcacagcagcaacagcagcagcagtgggagtgggaatggTAATGGGAATGGAATCGGAATCGAAATAAGCGGGGTTGTCCTGGAGAACAATAGTCATCATTCGCATCACCTAAGTAGCAGCGGCAGTGCAAATCTTGTGATCAACGGCCTTACGTCAAGCAATAGCataaacagcaacaacaacaacaacaataataacaataatggCAGTCTCCACTGCCAGTCAATGTCCCTCCAcgggcagggacagggacagggacagggtcTGGGACCGGTACAGGAGCAAATAGCATCAGGCAAGCCATCGCTTCATCTGCCCATGACCATGACCTTGGAGAGCAGAGACCTGAAAGGCAGCAGTCAGCAGGGACATGTCATCATGTCGGGAGGAGGAAGCTCTGGGGTCCACGCCAATGAGATTCAGCAGCTGCATCAGCATCCAAATCACTACAACTCGAGCAATAATCCCCTCTCCATGATGGGTGGCatgatgcagcagcagcacgtcaacatgcagcaccagcaacagcagcagcagatgatTCAGGGACAGTTCCCTCAGCATGGCGTCTCCATGATGAACAATCGTCAGATGCCTGCTCTTGTTGCCTTGTCAAATCTGGGAGAAGAATCTCCGGTCTCGAGCAATGTCTGTGGCCAGATGAACTCGTCGCTGGAGCTGGACGACAATGATCTGTCGCCCGACGAGGATGACGATGAGCTGGACACCGAGCTGGATGAACTGGACGCAGCCAAGCAGCAGCTGATCGatggcggcagcagcagcagtacctCGCTGCAGGCGCCGCCTTCTCAGCATGGCAGCGGAAGTGGCGGCAGTGGGGGACACACGCCCGGCAGCAAAAAGGATAAGCCCATCTACAATTGCCTGTTGTGTCCGAAGTCCTACCGCAAGCGAAAATCTCTGCTGGATCACTACAAAATGCATCCGGGCTTCTGTCACGATTGCGGCCAGCCCAATGGCAACACGTTAGAGGAAATAATCCATCACAATCGGACGATGCACGTGAAGGAGTTTCCGTTCGTGTGCGAGACCTGCGGGGAGTCGTACTCGCGGAAGCAGCAGTTTCACGCCCATGTCGACTCGCACAGCAAGAAGGATTTCAAAACCTTTCCGTGCGGCGAGTGCGGGCTAAAGTTTCCGCAGaagaagctgcagcagcatTTCGAGGAGACTGGCCACAAGGCGGACGGAGCCATCTGCGAGGTGTGCGGCGAGGAGTTTACATCAAAGAACGCCCTCTACCAGCACATAATACGTGTGCACAAGCGAGACAACTTCTTCGAGTGCCACATTTGCCATAATCGCTTCACGTTGAAGGCCAACCTGGAGCGGCATGTGCAGCTGCACACCGAGGTGAAgcgcacttatgtgtgcgacCTGTGCGGCTCATCCTACTATACATATCCCGCACTCAAAGAGCACTACAGCAACGCGCATGTGGATGTGTCCGAGTGCAAGTGCACGCTGTGTGGCAAGCGCTTCGGGTCGGCCAAGTCGTTGCAAAGGCATCTGCCCTCTCACTCGGAGGAGCGACCGCATTGCTGTAACTACTGCGATCAGACCTTCAAATGGAAGACGCATTTGGTGCGTCACAAGCAGACGATGCATGGAAATCAAACGCCGCCGCCTAAGAAGGGAAAGCAGCGCTTCCCCAAAGCGAACGAAGAAGCTGAAATGGCTGCTCTGCCGGATATGCCAGGTCCGCCGCCTGTGAAGGCCAGCAAAAAGTCAACAGCCGGCAAGGCAAAGTCGCAGGCAGCAGCGAGCACGGCGGGGGCTTCCttacagcaacagcagaagggAGCTGCAGCGACGCCCACGCCACCACCCCCAGTCTCGACGACCCCGGGATGTCTGCAGCAGGATCAATTCAATGCGGCGATGgtcagcagcaacagttcgCAGTCCTCGACGGCCTCCACGTCGCAGCACTCGGTGTCCACGAGTGAATCTCAGCAGAATTCCATCTACAATCAGAGCTTTAATGCTGAGAAACTGCCGCCAGGTCAACAagcaccgccgccgccgccacaacagcagcagcagccaccaccTCCACCAAATGCTTTGCATCAGCAACATCCAACGCCACCTCcaacacaacaacagcagcagcagcaacaaccgcGTGCCAGCCCGGCTGACATGCACCTGCAACGAATGAATAACTTCGGGCAGGAGGGGCAGTTCCACTTTGAGGCTGGCCAAGCGGCCGGAAGCTATCAGCAGCACCAGCTGATCAGTCAatatcagcagcaacagcagcacctgAGGAGTCACACTCCTCAGAGCCCTCATGCTGCCCATCCTCCACATCCATCGCATCCATCGcagatccagcagcagcagcaaccgcagCACTTTAGTTCCCCTCACCATATGCCGCCAatgcaccaccagcaccagctgatgatgcagcagcagcagcaccgtcATAACCAGCGATCGCCATTGCACCACCATCCCTCAacgcagcagctgcaacagcagcaccaacagccGTCGCATTCCCCTCAGCATGCGAGACTGCAGTCGCCGCAACCTCCGCcagtacaacaacaacaacagcagcaacaacaacaacaattccTGCAACAACAGGCCGCAGATTCTTGGGGCAACATGAACTTTGGCAATCCGCCCAACAACCAGCAGGAGCTGAAGGATAACAAATTCTATATTGTAGACTCAGCCGAGTTTCTAGGGCTTCCAATGAATGTGCCGCCTGCCCAACAGCAGCCACCACAGACTGTGAGCAAaccgcagcagccgcagccgccgccgccgcaacCACAACAGCAGCCCCAACAAGATCCAGCTCTGGCTGGTGATCTGATGAGCTTCCAGCACATGTGGCCAGCGCCAGGTTTCAGTCAGAgcccacagcagcagcagccccaacagcaacaaccgcAGGGACAGGCCAATCCAGGAGATCCTCACAATTACAACAACATCGGCAGCATACTCACGAATCTCATTGACAACCCCGCGACAATGGAGTACAACTTCGACTTGatccagcatcagcagcagccgacggcccagcagcagcagcaacaacagcagcaacaacagcaacaacagcagcagcaagcggcacaacagcaacatcacAATGCAGGAGGCTATCCAGGAGCCTTGATGAGAAGTGGCGCCGTTTACGGCGGAGCCTATGAGCAGCACATGAGCGACCAGTTGGTCAGTgagcaacagaaacaaaacaGCTTTCAGCCCTATCATTTGCATGGCCAGCAGGCACAACAACAGCCGCCGTTGCACCCCCACTTACTGCCCCCGGCGGCAGCGCATGGAAATGTTTACGAGCGGACAGGAGTCggggtgggtgtgggcgtAGGCTATTCTATGCTAGGGGACGAGTCAAAGGCCGTGCTGCCTCCGATGATGGGCGGAATGATGCAGCAAATGCCACCTCACGGACAGCAGCCAGATCTTATCTACTATCCAGTGAAAAACGATTGA
Protein Sequence: MDNKTKQLDFKLLVDQSLNLLDSLNTALRCDAIQFLLQTLKCKYPDACDQVVRNLFSHITNDNGEGLAVQHELAKSEQLQQLLLVTKKEKKEKQEPDSGGDGTDAEIKREHHVEEDEEEEAGSTDLNQNFEKILCKEEFLGLDDEEEEFLHDADTENSSSVQFHAGNHVDALGPGDPLDLIQGGGSLLVKRKYEATFGAEEDEEDHLDEDAANSSPNGNSSPNGNSSDSKLVKRMRTNNMHMAVAVGVGVEVGVSSVRRKEERSSLGEGYVFHEDSQYTLRYHHSTGEFSERAFKAQFRALLRLALSQHHKPFLKQFYENFVENGRLMGTTPSTRVLKELRDQRLEEWRRQRERRQLVSLLKQNEIQKQEIPKQQEIDDDDEPLQQDREQEPEREQEQEQEQELPQQLPAISFGDSELESETESQLSSAAQEIMKFEEFIDDGVGAGRLIDGLEMEPEIDDMLAGAGSALCSVNSASGHSSNSSSSGSGNGNGNGIGIEISGVVLENNSHHSHHLSSSGSANLVINGLTSSNSINSNNNNNNNNNNGSLHCQSMSLHGQGQGQGQGLGPVQEQIASGKPSLHLPMTMTLESRDLKGSSQQGHVIMSGGGSSGVHANEIQQLHQHPNHYNSSNNPLSMMGGMMQQQHVNMQHQQQQQQMIQGQFPQHGVSMMNNRQMPALVALSNLGEESPVSSNVCGQMNSSLELDDNDLSPDEDDDELDTELDELDAAKQQLIDGGSSSSTSLQAPPSQHGSGSGGSGGHTPGSKKDKPIYNCLLCPKSYRKRKSLLDHYKMHPGFCHDCGQPNGNTLEEIIHHNRTMHVKEFPFVCETCGESYSRKQQFHAHVDSHSKKDFKTFPCGECGLKFPQKKLQQHFEETGHKADGAICEVCGEEFTSKNALYQHIIRVHKRDNFFECHICHNRFTLKANLERHVQLHTEVKRTYVCDLCGSSYYTYPALKEHYSNAHVDVSECKCTLCGKRFGSAKSLQRHLPSHSEERPHCCNYCDQTFKWKTHLVRHKQTMHGNQTPPPKKGKQRFPKANEEAEMAALPDMPGPPPVKASKKSTAGKAKSQAAASTAGASLQQQQKGAAATPTPPPPVSTTPGCLQQDQFNAAMVSSNSSQSSTASTSQHSVSTSESQQNSIYNQSFNAEKLPPGQQAPPPPPQQQQQPPPPPNALHQQHPTPPPTQQQQQQQQPRASPADMHLQRMNNFGQEGQFHFEAGQAAGSYQQHQLISQYQQQQQHLRSHTPQSPHAAHPPHPSHPSQIQQQQQPQHFSSPHHMPPMHHQHQLMMQQQQHRHNQRSPLHHHPSTQQLQQQHQQPSHSPQHARLQSPQPPPVQQQQQQQQQQQFLQQQAADSWGNMNFGNPPNNQQELKDNKFYIVDSAEFLGLPMNVPPAQQQPPQTVSKPQQPQPPPPQPQQQPQQDPALAGDLMSFQHMWPAPGFSQSPQQQQPQQQQPQGQANPGDPHNYNNIGSILTNLIDNPATMEYNFDLIQHQQQPTAQQQQQQQQQQQQQQQQQAAQQQHHNAGGYPGALMRSGAVYGGAYEQHMSDQLVSEQQKQNSFQPYHLHGQQAQQQPPLHPHLLPPAAAHGNVYERTGVGVGVGVGYSMLGDESKAVLPPMMGGMMQQMPPHGQQPDLIYYPVKND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00474756;
90% Identity: iTF_00564215;
80% Identity: -