Dhaw000847.1
Basic Information
- Insect
- Drosophila hawaiiensis
- Gene Symbol
- hang
- Assembly
- GCA_037043685.1
- Location
- JBAMBA010000054.1:165918-179470[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.22 15 6.3 1.0 3 23 501 522 500 522 0.93 2 13 0.64 42 4.8 3.2 3 22 629 648 627 648 0.89 3 13 0.00047 0.031 14.7 3.3 1 22 760 781 760 783 0.90 4 13 0.045 3 8.4 0.1 2 21 795 814 794 815 0.93 5 13 0.00055 0.036 14.5 0.2 2 23 956 978 955 978 0.95 6 13 0.0016 0.1 13.0 0.1 1 23 986 1009 986 1009 0.96 7 13 0.00012 0.008 16.5 0.2 2 23 1097 1118 1096 1118 0.97 8 13 0.00023 0.015 15.7 2.9 2 23 1216 1238 1215 1238 0.97 9 13 0.018 1.2 9.7 0.2 2 23 1247 1269 1246 1269 0.95 10 13 0.0011 0.071 13.5 0.3 1 23 1282 1305 1282 1305 0.97 11 13 0.00032 0.021 15.2 1.1 1 23 1363 1385 1363 1385 0.98 12 13 0.0015 0.1 13.1 0.9 1 23 1393 1416 1393 1416 0.96 13 13 0.054 3.6 8.2 0.4 2 19 1424 1441 1424 1442 0.94
Sequence Information
- Coding Sequence
- ATGTGCGAcgctgccacaacaacaacaacagcagcagcaacaacatctgcagcagcagtagcacaaGGAACAGGAGCTACTGGCGATACAGTGATGGAAGAACAAAATCAACGAGAGCGACAAAGCTGCTGTCGCCTGTGCCTTTCGCCCGCCAGCGAATGCATTTCGATCATTAACAGTTATGCGGCCGATAAGGAGCCGCTGGCCACTAAAATACACAACTGCGTAAATATCAAGATCACATCGGTGGATCGTCTGTCGTTGCATATTTGCCATGCCTGCATCAGTTTTTTGAACTCATGGCAGAGCTTCAAGAATCGCTGCCTCAGCTCACAGTCGAAGCAGCGCCAATGGCTGGAGACGGACAAAACCAAACAGCAGACGCTACTCGGATACTTGGATTTGAACAGGGCCGAGAATGGCAGCACTattgagcaacagcagcagcagcagcacgatTTAAAAATGGATTCAGCGACGTCTGCAGCTGAAAAGGCGTCCGCTGCCAATATTTTGGATGGCATACCTCAGCTGAAGAAACGCAAATCGTTAACAGTCTATGTGAGTCCGAGTcccaagcaacagcagcaagcacagcaacaacagtcgcagcaacaTTCTCAGCAACAGCATGCAACAGGGGCAAGATCAACAACGAAAACATCaactgcggcggcggcggtggcagagTCGCAACAAACATTGCAAACCCTTTTATTGCAGGTgcccacagcagcagcgacattGGCAACGTCgtcaacacagcaacagcaacagcagcgcaagtatcaacagcagctgcagcagcaacgtggcaagcagcagcaacatcagtatcatcaacagcagcagcggcagagtCGCGTTCGTCAACcgcgacgacagcaacaagcgGCAACGAGCAAATTCAGGAGCAAGTTGTATGTGCCACTGGATATATCGGTGCCAGCACCGCCAGCGCTGTTGCCGCCACCGCAGccagctgttgctgatgcagcgtcgttgccattgccgctgtcgctgccgctTGATTTCAGCCAGAATCCGAATCCAAATCCCAATCCAAATCAAAATCTAAATCAGAGATATACAAGTAGCGTTTTAGTGCCGCAGCCGCAGGCGCCTCCGATGCCGCTGCCCCCGCCAGTTGCAACAATGAGCAGCAACGAGGCTGCCATTGGtggtgcaactgcaactgcaacggcaaccgCAGTCACGACTCCATTGCTCATGCCGCCGCTGCCTGCCGTGCCCATCAAGGATGAGCCCCTGGACGATACGGATGATGACTTGCAAATGAAGTGCATAGACGAATCCGATGATATGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAAGGCGATGTGCCACTAAATACCTCCGACTATGATTATACGGCTCAGCATGGCGTGACCGCTGTTGTGGCGGCTGCATCGCTGCCGGCCAGCGCCGTTGCAAATGTGGCCGCCGCTGGCGACTCGAAGGTGGCCAGCTGCCGGGCGTGCAGCCTGCAGTTCTCGACGCGGGCGAATGCGCGTCGCCACGAGCGCAATCTACATCCGAATCTGTTTCAATTGTCGACAGACTCACCAAATAATACGCCAATCACCAAGCCGACACCGGCCCTCGCCGCCGCCTTGGAAATACAGCgtgcagcggcggcggcagcggcaaccaCTGAGGCAACGCGTGCCGCTGCCGGTGGCAATATATCGGCGCAAAAGTATCGACAGGTGGTGATGAACACGTTCATCAACTGCGAAAACGGTGGCTTCGACTACGACAATCCCGAACAGTatcagcagctgttgccgcACGACAAGGTCGCCTTCATACAGGAGAACAGCGAGTTTCTCGAACAGTACCAGACGATGACGTGTCGCTGTTGCAACAAGTACTTCAACACGTACAAGAACTTTATGGCGCACGTACGCAAAAAGTATCCGTTGCTGCCGCGCAACCTCTGCTTCAACTGCCTCAAGATGAACGACTCGAAGGCGCTGTTCATATCGCATCTGAAGAAGCGCAACTGCATCAATTTGTATCGTGTGTTCAACGCACTGCGCGCCAAACAGCCAAACTTTGTccatgccaatgccaatgccaatgccccATCCACTTCCACTGCAGCCGCAACGACTGCTgtacaccagcagcagcagcagcaacagttggtgACAGCAAacgaaacagcagcaacaacaacagcaacaacatcaacggaTCGTCCGGAGAAGTTGCGTGCCAAGGAGCTGCTGGTTAATAAGCTGTACGAGTGCAAGCTGTGCCCAAAGGGTTTTCGCACAAAGCACGAGTTCCGCACCCATGTCTACGACAAGCATGCAGATGTCCAGCGCAAGGATAACAATGCGATACAGTGCAGCTTCTGTGGCTTGGACTTTGCCGATCCCGCTGATCGTCGAAAACACTACAATAACATGGATTGCATTGTCCGTCTGCGCTGCATGACCTGCGATGCGAAACTGGAGACGCATCAGCGTTTCCTCGACCATGTCTATCAGGATCATTTGGGTGGGGTGAGCAGTGATAATGCATCGCCCACGGCGACGACCAGCGGCTTGGATCATTCGCCCGGCAAGCGCAGTTTGCTGGGCGCCCTTGGCATCGGCGTTGTCAGTCAATCATCCAATGATGAGtcgcgcagcagcaacagcaacaaccacaacaataacaataataacaacagtaacaacaacaacaataatacacCTTTAACTTCGACACCTAAACTACCAATcgtagcaggagcagcaacagctggtggaggaggaggagcagcagcaaccagtgGCAGTCGAGATGCACCCAAATCACAGTATTTCTCACGAATGCCACAGGTCTGTCCGATCTGTGGCCAGCAgtacaacaactataacaatgTGTTGCGCCACATGGAATCGAAGCATCCCAACAAATTGCCAGAGACATATAAGTGTGTCCGCTGCGGGTTGGGCTATCCGCGGATCTCCTATCTGCGGGAGCACATGATCAATGTGCATGGCGTTGACAAGAATCGGCATTCGGGCGGCTTTGAATATATTGTGAACGCCGATGCGGTTAAATTGGCGGATGGCAGCACGCCCAATGTCTATACGGGACGATATGATTATGTGATGAAGGATCTGATGTCAATAACAAATGGTGGGACACTcgatgatgatgacgatgaagtCGGCAACATTGCCAAAAAGATGAGACTCGAtgatagcagcaacaacagcagcagcatcaacatgAGCAGCATTGCCAACCAGCAGAAGGAGTGCCTCATCTGCAATGCGGTGTTTAGCAACAATATTGGTCTATCGAATCATATGCGTTCCCATTACACAGCATCGATAACGACAAGTGCTGCTCTGGCGGTTGCCAATCGCATGACGCCCAAATCGCtgacaataacagcaacgcCACCGCTGGAAACAACGacgtcaacaacaactgcagctggaattgcagcagtggcagcatcatcatcaggaGCAGTCGCCTCAACATCATCAGGATCAGGCTCATCATCCGGCAACTTGCCGCCAGCAATGGTGCATCAGACGGCACAGGAGCAGGCGGTATTCCGTCGCAGCCTAGATCAGGCCGCCGATCGACGATTCCGTCGAATGCGCTGTCGCATCTGTCAGCGCAGATTCAGTTCGAAGAAATCGTATCGCTACCACATGCTCACCGACCACCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTGTGCAATGCGGAGTTTGCCTACGAGAAGGGGCTCAAGGTGCATCTGTTCAAGGTGCACGGCCGGGCCATCAAGGACGTGATGATTATCAAGCAGTTCGAGTGCGATGTCTGCTCCACGGTCTACAGTTCCGAGCTGGaattgcagcagcacaagcgCAGCGTACACAAGTCACACGCCAGTGATTCATCATCAACTgcagctggtggtgctggtgctgctggcaaATCATCATTGAAATCTGCTACTGCAACTACCTCATCGACAGCTGAGCTAGTCACAGACACATCATCCGCCTCGGGCACGGCGGGTGCGGCCATTTTGCTGCCACTTTACTGGTACCAGTGCAAATATTGTCCATCCAATTTCAACACCAACAAGAAACTGGCCATCCACGTCAACTCGCACGACGAGTTCGACTCGACTGATTACTCGTGCAAGGACTGCGGCAATGTCTACAGCGGCCGCAAGAGCCTCTGGGTGCATCGCTACAAGAAGCATCCGCCGGTGTCGGATCCCGCCGAGTGCACGCTGTGCCGCAAGATGTTCTTCGATCGCCAGATGCTGGAGAATCATACGCCCACCTGCAATCGCAAGCCAATCACTGCCACCGGCGCCCATCAGcaggatcagcagcagcagcaacaacaaaacagcagcagcagcaacaacaacagctgcagctgcaacaccaTCAGCGACTCATCTTTAAGCACAAAAcgggcgatgatgatgacgaggaggaggacgatGATCAGTTGCTGCTAA
- Protein Sequence
- MCDAATTTTTAAATTSAAAVAQGTGATGDTVMEEQNQRERQSCCRLCLSPASECISIINSYAADKEPLATKIHNCVNIKITSVDRLSLHICHACISFLNSWQSFKNRCLSSQSKQRQWLETDKTKQQTLLGYLDLNRAENGSTIEQQQQQQHDLKMDSATSAAEKASAANILDGIPQLKKRKSLTVYVSPSPKQQQQAQQQQSQQHSQQQHATGARSTTKTSTAAAAVAESQQTLQTLLLQVPTAAATLATSSTQQQQQQRKYQQQLQQQRGKQQQHQYHQQQQRQSRVRQPRRQQQAATSKFRSKLYVPLDISVPAPPALLPPPQPAVADAASLPLPLSLPLDFSQNPNPNPNPNQNLNQRYTSSVLVPQPQAPPMPLPPPVATMSSNEAAIGGATATATATAVTTPLLMPPLPAVPIKDEPLDDTDDDLQMKCIDESDDMMDPTMFLERSEHEGDVPLNTSDYDYTAQHGVTAVVAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATTEATRAAAGGNISAQKYRQVVMNTFINCENGGFDYDNPEQYQQLLPHDKVAFIQENSEFLEQYQTMTCRCCNKYFNTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVFNALRAKQPNFVHANANANAPSTSTAAATTAVHQQQQQQQLVTANETAATTTATTSTDRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNAIQCSFCGLDFADPADRRKHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASPTATTSGLDHSPGKRSLLGALGIGVVSQSSNDESRSSNSNNHNNNNNNNSNNNNNNTPLTSTPKLPIVAGAATAGGGGGAAATSGSRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDDEVGNIAKKMRLDDSSNNSSSINMSSIANQQKECLICNAVFSNNIGLSNHMRSHYTASITTSAALAVANRMTPKSLTITATPPLETTTSTTTAAGIAAVAASSSGAVASTSSGSGSSSGNLPPAMVHQTAQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDVMIIKQFECDVCSTVYSSELELQQHKRSVHKSHASDSSSTAAGGAGAAGKSSLKSATATTSSTAELVTDTSSASGTAGAAILLPLYWYQCKYCPSNFNTNKKLAIHVNSHDEFDSTDYSCKDCGNVYSGRKSLWVHRYKKHPPVSDPAECTLCRKMFFDRQMLENHTPTCNRKPITATGAHQQDQQQQQQQNSSSSNNNSCSCNTISDSSLSTKRAMMMTRRRTMISCC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -