Basic Information

Gene Symbol
-
Assembly
GCA_037043685.1
Location
JBAMBA010000109.1:460054-463742[-]

Transcription Factor Domain

TF Family
THAP
Domain
THAP domain
PFAM
PF05485
TF Group
Zinc-Coordinating Group
Description
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 6.6e-09 1.1e-05 26.0 0.2 24 87 2 54 1 54 0.80
2 10 1.3e-14 2.2e-11 44.3 0.1 1 87 77 148 77 148 0.77
3 10 1.5e-06 0.0026 18.4 0.0 1 58 181 234 181 255 0.84
4 10 2.1e-15 3.6e-12 46.8 0.1 1 86 272 344 272 345 0.80
5 10 1.3e-14 2.2e-11 44.3 1.4 1 86 479 551 479 552 0.81
6 10 4.3e-15 7.4e-12 45.8 2.4 1 87 615 686 615 686 0.83
7 10 4.7e-15 8.1e-12 45.7 4.1 1 86 799 869 799 870 0.85
8 10 1.6e-11 2.8e-08 34.3 0.1 1 62 962 1018 962 1027 0.81
9 10 5.7e-11 9.7e-08 32.6 0.3 1 58 1031 1079 1031 1095 0.86
10 10 5.3e-09 9.1e-06 26.3 1.4 18 87 1096 1154 1082 1154 0.76

Sequence Information

Coding Sequence
ATGCCCAAGCGTAACCCACAGATATTGGATTGGTGCCACAATTTGCGACTGGATCAGGCGGCTATGAGCGGCTCGGAACAGCACGTTTGTGAACGCCACTTCGAGGCAAACTGCTTCAATGCGTCTAGAGTGCTGCGTCCAGGAGCACGACCCACACTTCATTTAGGTTATGAGGACCTAGACGATGTGATACCGAATCCGGCGAACTGGGAAGAGGATGTGATCGTATGCTGTGTGCCCCACTGCGAAAGCTCCAAGGATGCGGATGAAGTCCAACTGTTTGGGCTGCCAAAGGTGCGCCAGTTGGCGGACAAGTGGCTGCAAAATGTGCGCCTCGATCCGAGCAAGGAACAACTGGCCGGCCTGAAGATCTGCAGTGTGCACTTTGAGGCGAGCTGCATGGAGAATGGACGACCCACCTATGGTGCAATGCCCACACTCCATCTCGGTCACGATGAGCTCGACAATATACACCCAAGCGTAGAGTCGGTGCCGACGAATCAGAAGCGCTACTGCAATAGAGATGGCGCCAGTCACGATTGCTGCTATCCGCAGTGCGTGGAGCTGCAGAAGAGCTATCTGCGGGTTACCTACGAGCTGCCCCAGGAGCAGGAGCTCCGTCAGCAGTGGCTCTCCTATATGGGCCTGGAAGCGCAGCAGCTCgataagcagcagctgcccaagCTCTGTCCACTCCACCTAATCTTGCTCTACGATCACAGTGCGGATCACTTTTCGGCTCACGCCGCTGAGGAGCTGTTGGACTCCAATTATGAGGCAGCGCGCAGCAGCGTTCGCATACGCGTCGTCAGCTGTGCTGTGCGCGGCTGCAGAACGCTCAAACCACGCGACGGTGGTCGGCTGCATGGTTTGCCCACGCGGCGAGATCTGCTGGAGATGTGGCTGCACAACATGCAGCTGGTGTTTTACGAGCAACAGCGTTATATGTACAAGATTTGCAGCAAGCACTTTGAGTCCACATGCTTCACGGAAACAACCAAGCGGCTGAAGCCGTGGAGCATGCCTACGCTGGAGTTGCCGGAGCGCCAACAGGGCGAGATGCCCGCCTATCAGAATCCCACAGAGTTGGAGTGGCAACACATGAATGAGCTGCAGGTCAGCGAGAAAGTAGTTGAGGCTCAGCCGGAGCCATTACTCAAGCTGGAGCCGTTGCCAAAGAAggagccaccaccaccgcagGTTGTGGAAGATGAAGAGGATTGCGACAATAACTCACAGCAGCCACTGGAAATGCAGGCGCTGGAGGTGCTGCTCGAGGTGGGCCATGTCGAGAAGTGCACCACCTACGAGCAAATGGATACCGAGGCAAATCTCAACTATGCCGAGCAGTTCTCGCACAATCCCCTCAGTCCAGGTCCACCTCAATGCCGTATCCCCGTTGTCCAGAATGGACTCCACTACAGTGCACGCCACTGCAGCGTGCATGGCTGCAATGTCACCTCCAATAAtctgagcagcagcatcaagcTACACAAGTTCCCCGTCTCGCTGGATGCCATGCAAAAGTGGATGCACAACACCCAGGTGCTCGTGGACGTCAAATTCGCTTGGCGTTTTCGCATCTGCAGTCATCATTTCATCGAGGATTGCTTTCACGGCTCGCGCATCAGACGTGGGGCGATGCCTACATTGCGACTGGGCTCACGTCGACCGAAGCATATCTATGATAATGAGTTTAATgcccaactgcaactggaacaGTCCAAAGAAGAGGCCAGGGAGGCTCTCGCTGCCCCGCTGGAGTctcagcaacagttgctttCTGCGAATGTAGGTCTGCGCCTGCCGCGCCCAGCTCCGCCCTGCAAATCCAGCAAATACTGTCAGATCGAGGGCTGCTCCAATCACTTGACCAGCGAGAATGTGACGCTGCACAAGTTCCCCCATTCGTCGGATATGTGCGCCAAGTGGCAGCATAACACTCAGGTGCCCTTCGATCCCGAGTTCCGCTGGCGCTATCGCATCTGCAGCGCACACTTTGAGCCCATCTGTCTAGGCAATGTGCGACTGATGCACGGCAGTGTGCCCACCCTGAATCTGGGGCCACTTGCGCCCAAGAAACTGTTTGACAATGAGTTCTTGCGTCTGGACAAGCCAATGAGCAGTTCGGAGCTGGGTATGACCGtcaaacaagaacaaatgGAGCAATTTGATCAAATGGAGCTGGAAGATGGCAACCAAGAGCAGGATGATTTCAGTCTGCTGGAGCCCGAGCTGCAGTTGCACGAGGATAGCGAGGATGAGCAACAATATGACAATCATTTCAGCCAAAACGATTCCTATAACTGGTCCGATCAGCAGCTGCGTCTGCCCAGCATTAATCAGGAGAAGTGCGCCACCATCTACAATCCGGTCAAGTCCGGCTATGATAAGTGCTCACTGGTCCACTGCCAACGACAGCGTTCCCAGCACGGCGTGCACATCTACAAGTTTCCACGCTCGCGTCAGATACAGCAACGATGGATGCATAATTTGCGCATCCAATACGATGAGCGACGGCCGTGGAAGACAATGATATGCAGTGTCCATTTCGAGCCGCACTGCATCCGTCTGCGCAAATTGCGTCCCTGGGCGGTGCCTACGCTGGAACTGGGGGACAATGTGCCGCTGGAGATCTTTACGAACGAGCAGAGCCAGCAACTGTTTGCTCAGTCCGAAGCAGGCAGCGAGTGTGATGACGTTGAAGTGGATGTTGAGGACACCATACTGGAGGACTTGGATGATGACTATGATGACAATGACGCtgatgtgaatgtgaatgctgATGATCAAATGCGAGCAGCTCCATATGTCAAAAGAGAGCGTCGCTCTCGATTTGATCCTCTGCCACCGGGTCAGCTGCCACCGTGGAAGATTAAATGCTGCTGTTTGCCCTATTGCCGCAGTCCTCGCGGTGATGGCATCAAGCTCTTTCGACTGCCCAACAACATCAGCTCCATACGTAAATGGGAGCAGGCCACAGGCATGCGCTTCTATGAGTCCCAGCGAAACACAAAGCTCATCTGCAGTCGACACTTTGATCCGCAGCTTATAGGCCGCAGGGCCCGAGCTGCCCCTGTGGGACCACGTTGCTGCATGCCCGATTGCTCTGAGGATGTCAATGTCCAGCTGCACAAGTTTCCCAAAgATCCTATGCTGCTGCATCAATGGTGTCAGGCGCTCAATCTACCGGATGTTCAAAGCTACTCCGGCAAATACATCTGTGCAGCACATCTGCCCTCCAATGCGATGAGCTGTCTAATTTGTGGCGTGGATGATGTACAGCTGCCAATGCTGGACTTTCCCCAGAATCGCAATCAACGCACCAAGTGGTGTTATAATCTGAAAATCGAGCCTCTGCCCAAGTGGGACAACTCAAAGCAAATTTGCTGCAAACACTTTGAGAGCTTTTGCTTTATCCAGCCGGGTCAACTTCTGGCGGAGGCATTGCCCACGCTACACTTGGAGCACGGAGATAGCAACATATTCCTAAACGATGAGGCCGTGGATAACAGCAAGTTGTTGCGCATCAAGGACGAGCCCATGGAGAGCGAGGATCTGATGCTGTAA
Protein Sequence
MPKRNPQILDWCHNLRLDQAAMSGSEQHVCERHFEANCFNASRVLRPGARPTLHLGYEDLDDVIPNPANWEEDVIVCCVPHCESSKDADEVQLFGLPKVRQLADKWLQNVRLDPSKEQLAGLKICSVHFEASCMENGRPTYGAMPTLHLGHDELDNIHPSVESVPTNQKRYCNRDGASHDCCYPQCVELQKSYLRVTYELPQEQELRQQWLSYMGLEAQQLDKQQLPKLCPLHLILLYDHSADHFSAHAAEELLDSNYEAARSSVRIRVVSCAVRGCRTLKPRDGGRLHGLPTRRDLLEMWLHNMQLVFYEQQRYMYKICSKHFESTCFTETTKRLKPWSMPTLELPERQQGEMPAYQNPTELEWQHMNELQVSEKVVEAQPEPLLKLEPLPKKEPPPPQVVEDEEDCDNNSQQPLEMQALEVLLEVGHVEKCTTYEQMDTEANLNYAEQFSHNPLSPGPPQCRIPVVQNGLHYSARHCSVHGCNVTSNNLSSSIKLHKFPVSLDAMQKWMHNTQVLVDVKFAWRFRICSHHFIEDCFHGSRIRRGAMPTLRLGSRRPKHIYDNEFNAQLQLEQSKEEAREALAAPLESQQQLLSANVGLRLPRPAPPCKSSKYCQIEGCSNHLTSENVTLHKFPHSSDMCAKWQHNTQVPFDPEFRWRYRICSAHFEPICLGNVRLMHGSVPTLNLGPLAPKKLFDNEFLRLDKPMSSSELGMTVKQEQMEQFDQMELEDGNQEQDDFSLLEPELQLHEDSEDEQQYDNHFSQNDSYNWSDQQLRLPSINQEKCATIYNPVKSGYDKCSLVHCQRQRSQHGVHIYKFPRSRQIQQRWMHNLRIQYDERRPWKTMICSVHFEPHCIRLRKLRPWAVPTLELGDNVPLEIFTNEQSQQLFAQSEAGSECDDVEVDVEDTILEDLDDDYDDNDADVNVNADDQMRAAPYVKRERRSRFDPLPPGQLPPWKIKCCCLPYCRSPRGDGIKLFRLPNNISSIRKWEQATGMRFYESQRNTKLICSRHFDPQLIGRRARAAPVGPRCCMPDCSEDVNVQLHKFPKDPMLLHQWCQALNLPDVQSYSGKYICAAHLPSNAMSCLICGVDDVQLPMLDFPQNRNQRTKWCYNLKIEPLPKWDNSKQICCKHFESFCFIQPGQLLAEALPTLHLEHGDSNIFLNDEAVDNSKLLRIKDEPMESEDLML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00514210;
90% Identity
iTF_00514210;
80% Identity
-