Basic Information

Gene Symbol
CAMTA1
Assembly
GCA_037043685.1
Location
JBAMBA010000143.1:1255000-1276219[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2 1.7e+04 -5.6 7.6 20 70 123 173 114 212 0.71
2 3 6.3e-49 5.4e-45 151.8 2.2 2 116 270 382 269 382 0.98
3 3 1.3 1.1e+04 -4.0 6.1 22 110 539 634 519 640 0.61

Sequence Information

Coding Sequence
atgGCCGGTTATCGGGCTGCCGCTGGCGCCCGTgtcggcaacagcagctgccgccgtgcagcccagcagcagcagcatcagcagcagcaacagcagcagtgggcATCCGGCTCCAACAATGGCAGCATATGCTCATCATCAGTCAATGACGGCGATCATCGCTCATCAACCACGCATCATCACATTCTAGccacggcaacggcagcagccgcaaccgcagcaacagcagcagcggcagcagcaacagctgcagttgcagttgcactacCAAtgccagcaactgcagcagcagcaggtggagTGGTGCAGCCGAcggtagcaacaacagctgcgtATGGACAGCAAcatatgcaacagcagcagcagcagcagcaacagttgcagctgcaaaccacacaccagcaacatcaacagcaacaacagcatatgTTGCATCAGCAACACgcacagcatcagcatcagcaacagcaacatcaacagcagcagcatcatcagcagcagcaattgctgccACATCATctacagcaacaccaacagcatcaacaacaacagcagcagcagcagcagcagcagcaacaacatttagGTTTAACGCCCGCgctgcaccaccaccatcatcatcatcatcaccaccaGCAGCTGTCGCTCCACCAGAACCACCTGTACTTCAATGGTTTgggccatcatcatcatcggcagATCTTTAGTCATCTGCAGAGCGCTCTCTTGCCGCTTAGTGTCAATGGCGAGCCTATCAAACTGCCCGACAATTTGGAGAGCCTGCCAAGAGCCGACAGTTTCCCATCGCAACGCCATCGTTGGAATACAAATGAGGAAATCGCTGCGATTCTTATCAGCTTTGATAAGCATAGTGAATGGCAATCAAAAGAAGTCAAAACAAGACCGAAGAGCGGCTCCCTGCTGCTCTACTCACGCAAGAAGGTACGCTATCGACGCGATGGCTACTGCTGGAAGAAGCGCAAGGATGGGAAGACGACCCGTGAGGATCACATGAAACTTAAAGTACAAGGCACTGAGTGCATCTATGGTTGTTATGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGCTACTGGCTACTGCAGaatccGGACATTGTTTTGGTGCATTACTTGAATGTGCCATATCCGGATGATAATAAAATGGCCGTCATAGCGCCCAGCATAACGCTGTGGGGCGATAAGAAGGAGTGGACCAAGGAGGAGCTGGTTAGCCAACTGAAACCTATGCTCTCCACGGTCAATTCGGATGAGGATTCCGACTCGGGCAATGACATAGAAATATCAACAGCCGAGACGGTGGAGTCGATTGTTTGCCAGCTGATGGAGAAGCAGCGTCTATCACGTCAGGCAGCTCTAGTCAAGCAGCTCGATTGTGGCTGCGGAGATGCAACGTGTGCCGATGGCAAAACCTGCACGCATCCCGTCATGCGACGCACGGGCGGCATACTCAAATCCGTGTCGGAGAAGCGGCCCAATGATGCATACAGCACCGCCAATGGTACGCCCAATGTGGTCGTGGCCAGCAAGCTTTATTCGCGGTGGTCGGAGCGTCACAGGCAGCGTGAGGCAACTTTGCATTTGGAGAATCCGCATGCGCAGTTTCACAATGCCACGCAGCAGTTGCCGCAGGAGTCGGCgatcaaatttcaaatcattccgcagcagcagcaacaacaacaacaacagcaggccAATCACAGTGATGGCAACTATCAGCAGCAATATCGTGGTGCCAATCAAATGCTGGCCACAAGAAGTAATCTAAtaatacagcaacagcagcagcagcaacagcagcagcaacaacaacaacaacagcagcagcagcagcagcaacaatatcaacagcagcaacagcaacagcacttGAATTTGCAGCGTTTTGTGGCCAGTCACAATCAGAACAATCAGAACAGCTACccccggcagcagcagcaacagcagcagcagccaacccCAGTCGAGGCCATGTGCATGTCACCTGAGCATCACAGCAGCGGGGGcagtaaaaataacaacaacagcaatcagctcacatcggcaacagcaacgtctTCCGCTGGCAACACTCCTTCCACGTCGACAACATCATCCACCTCGAGTTCCTTACAGTCGATTATCGATggcaatcagcagcaacaaattacaacgacaacagcaataacaacaacaacagcagcagcaacttgtgATAATTTAATGAGCGCCAATTCGCTTGCTGAGCTGGagttgggcagcagcagcggcagcaacagcaacagcaacagcaacagcagcatcaggcgtcaagcaactacaacaacaacaacagcTGCTTCCAGTGATAACAGTAGCCAAATTAGCGCCAGCGACGAGAGTAGCAGCTTtggcgccaacaacaacaatcccattagcagcagcagcagcaacaacgacgacgaacAACCCCAAGCTGAATCCATGAGCTTCTTCAATGAGACGCTCGATCTCTCACACGAGGATATACAACGCACGCTTATAGCAAACATGCcgtttaacaacaacaacaacagcaacaataacaatgtagtggcaacagcaacaacagtagtaacaacgacaacaccagcaacagcagttaacagcagcaacaacaacgaaacaaTTGTCACgcaccaacagcaaccgcaTAGTGTGGAGGAGACAGAGGGTGAAGATGAGGATACAGCTGATGTCTTTGCCAATTTGGATGCCTTTGACATGCTGGTGGAGTTTCCAGAACTTGATCTAGATGATAAACAGGCGCTGAACAATACAGCGCTGCAGCAGAGCAAAATCTGGTACACAGTTCCTCTTATCTGGGAGCAGCCGCGCAATCGCAGCTGCTACAGTCGCAGACGAGACGCAGCGCAAGCTGCTCAACATCTGCGACTTCATGATGGTGGTTGCTATACGGTGCTCTTTGATGCACAGCCAGTGCCCACGGTGCTGGTGCAGGAGGGCGTTTTGCGGTGCTATTGCCCCGCCCATGAGGCGGGTCTGGTAACATTGCAGGTGGCCTGTGGCGGTTTTTTGGTCTCCAATTCGGCCATGTTCGAGTACAAGCTATCGCTGCTCGCGGATGCACCCTTCGATGCCAGCAGCTCCAATGACTGCCTGTACAAGTTCACACTGCTCAATCGACTCTCCACCATCGATGAGAAACTGCAGCTCAAAGTGGAGAATGAGCTAACGacCGATCACACATCGTTGTATCTGGAGCCGAACTTTGAGGAGAAGTTGGTGGTTTACTGCCACCGGTTAATGAAGCATGCCTGGAGCACGCCCAGTACTGCGGCCAATTGGAGTGTGGGTTTGCGTGGCATGACACTCTTGCATTTGGCCGCCGCTTTGGGCTATGCGAAGCTGGTGGGCGCAATGCTCAACTGGCGCGCCGAGAATCCACATATCATACTCGAAACGGAGCTGGATGCGCTCAGTCAGGATGTGCACGGCTTTACGCCGCTCGCCTGGGCCTGTGTGCGTGGCCACTTGGAATGCACATTACTGCTGTACAAGTGGAATCACAATGCTCTGAAGATCAAGACGCAGGCACAGCACACGCCCCTCGATCTGGCCAGCCTTAAAGGACACAAGCTGCTGCTTCAGCAGCTGTGCCGCTGGAGAAGGAGCGCTGTCGCAAGCCCCAGCCACGTGGCGGTCTAA
Protein Sequence
MAGYRAAAGARVGNSSCRRAAQQQQHQQQQQQQWASGSNNGSICSSSVNDGDHRSSTTHHHILATATAAAATAATAAAAAATAAVAVALPMPATAAAAGGVVQPTVATTAAYGQQHMQQQQQQQQQLQLQTTHQQHQQQQQHMLHQQHAQHQHQQQQHQQQQHHQQQQLLPHHLQQHQQHQQQQQQQQQQQQQHLGLTPALHHHHHHHHHHQQLSLHQNHLYFNGLGHHHHRQIFSHLQSALLPLSVNGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDEDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDATCADGKTCTHPVMRRTGGILKSVSEKRPNDAYSTANGTPNVVVASKLYSRWSERHRQREATLHLENPHAQFHNATQQLPQESAIKFQIIPQQQQQQQQQQANHSDGNYQQQYRGANQMLATRSNLIIQQQQQQQQQQQQQQQQQQQQQQQYQQQQQQQHLNLQRFVASHNQNNQNSYPRQQQQQQQQPTPVEAMCMSPEHHSSGGSKNNNNSNQLTSATATSSAGNTPSTSTTSSTSSSLQSIIDGNQQQQITTTTAITTTTAAATCDNLMSANSLAELELGSSSGSNSNSNSNSSIRRQATTTTTTAASSDNSSQISASDESSSFGANNNNPISSSSSNNDDEQPQAESMSFFNETLDLSHEDIQRTLIANMPFNNNNNSNNNNVVATATTVVTTTTPATAVNSSNNNETIVTHQQQPHSVEETEGEDEDTADVFANLDAFDMLVEFPELDLDDKQALNNTALQQSKIWYTVPLIWEQPRNRSCYSRRRDAAQAAQHLRLHDGGCYTVLFDAQPVPTVLVQEGVLRCYCPAHEAGLVTLQVACGGFLVSNSAMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQLKVENELTTDHTSLYLEPNFEEKLVVYCHRLMKHAWSTPSTAANWSVGLRGMTLLHLAAALGYAKLVGAMLNWRAENPHIILETELDALSQDVHGFTPLAWACVRGHLECTLLLYKWNHNALKIKTQAQHTPLDLASLKGHKLLLQQLCRWRRSAVASPSHVAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00542425;
90% Identity
-
80% Identity
-