Basic Information

Insect: Drosophila hamatofila
Gene Symbol: -
Assembly: GCA_035045345.1
Location: JAWNPA010000019.1:2704150-2706831[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0035 0.26 12.0 0.4 1 23 225 247 225 247 0.98

2 7 0.0071 0.52 11.0 2.6 1 23 571 593 571 593 0.98

3 7 4e-06 0.00029 21.3 0.6 1 23 599 621 599 621 0.98

4 7 7.6e-05 0.0056 17.2 1.8 1 23 627 650 627 650 0.95

5 7 3.4e-07 2.5e-05 24.6 2.9 1 23 656 678 656 678 0.97

6 7 2e-05 0.0014 19.1 1.0 1 23 684 706 684 706 0.97

7 7 5e-07 3.7e-05 24.1 1.0 1 23 712 734 712 734 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0035	0.26	12.0	0.4	1	23	225	247	225	247	0.98
2	7	0.0071	0.52	11.0	2.6	1	23	571	593	571	593	0.98
3	7	4e-06	0.00029	21.3	0.6	1	23	599	621	599	621	0.98
4	7	7.6e-05	0.0056	17.2	1.8	1	23	627	650	627	650	0.95
5	7	3.4e-07	2.5e-05	24.6	2.9	1	23	656	678	656	678	0.97
6	7	2e-05	0.0014	19.1	1.0	1	23	684	706	684	706	0.97
7	7	5e-07	3.7e-05	24.1	1.0	1	23	712	734	712	734	0.98

Sequence Information

Coding Sequence: ATGGAGCGCAAAGAAGTGGACACACAACAGTTCATCGACCACACGCTGCTGGCAACGGAGCTGATGCAAAACAACTTTATGATGGATCTCATGGACCACACGGGTGTGTTTCCGAAAACAGAAGGACCCACCAATCTTAGCACCACGGCGCACCACAGCACCACCAATGGCGGCGGCTATGTGGAAAAGCATACGCTAACACCGCCGGAGCTCAATTTTCACAATACGATCTTCCAGTTTGTCAACAAACATGTTGTCGAGGAGCCGAACAGCGCACGAGCAGACGCGGTGCCCGCTTCCCCCGAACGCACGCCAAACAACTATGTCAAGGATACGGACGTGGAGTTTCTCACACTCAACAGCAGCTTCTTGGATCGCGCAgatgcggctgcagctgcaacagctggtGGGAATGAGAATGTGGTGCCTCAGCAGGTGCCACAGCCCACCTTTCCCGCTCTAGCCATTGAGCCCACAGTGCCCATTGATGTGAATGCAGCGCTGCATGGCGACGATCTGCTCTATGCCCACAATGCATCCGTAACGAACGCACGCAAGGTGCTGCCCCACAAGAAGCGCATCTCACGCAAGCTCAAGGGCTCTGTCTGTGGCCTGATGGAGGCCGAGCTGGAGCAGCACAAGCATCAGCATGTCGTCTCTACAGTGGCCAACTATAGCTGCGAAATATGCGGCTATGCAGTGCACACACAAATCGAATTTTATGCCCACCTGAAGGAGCACTACGATCCGGGCAGTATGCAGCAGCGTCTAGATgtgccacaacagcagcagcagcagcagcagcaacagcaaaaggagCCGCTGGACATGTGCGGCTTGTCTGCGCAGGATAAGctacagcaggagcaggcaaAGCTGGATCAGGTCTTTCAGGATGTGCAGCTAAACTTTGAGAACTTCCACAACATTAGCCATGTGGACGATGATGTGGTGGACGATGTGGGCGTCAATATGGTCATACATGCGGATGCCATGTCGCTGCACAAGGCCGACGATAAACTGTCACCGGTTGGAGCTGCGAATGCAACCGCAACGAATGCTGTGGCCGTTGTGGATGATGTGGAGTTCAGCGATACGGAAGATATGCTGGAAGGCATACGCAACGTGGTGGACAAGGTGTCCGTGGAGGATACCTGCGATGCGCCCTggtttaataacaatttcagTGACATTGCCTTCTCGGGGCTGTTGTTGCCGGGCGAACCGCCGCCGGCGCCACCTCCAACAGCACCTACTCCACCGGCGACATCGCTGCTCAAGCCGTCAAGTCACATGGAAGAGCATGCACAGGATGATCAGCTGACGCTGAATTTCCTAAAACAAACCACACAGCCCAAACTGGAGATGGGTCACAAGAAGAGCTACATTGAAGCAATcgctgcagctgaagcagcagcagaagccgcggcggcagcagcagcgactgcaatGACCAACTCCAGCGCGACCTCAATATCGTCGCCAAACCGTACGCCCACACCCAACGCTGGCTCCACCatcgagcagctgcagcgttcGCCTCTGATGCTCAATGAATCCTTCAAGCTGGAGGATGTGGAGACCACAGCGCCCACAGGCAGTGCCAGCTCCTCGCCAGCAGCCACCGATGTCATCGACGACAATGCGGACAGCTATCTCATGGAGCCGGACAAGCCGCCGGTCGATGAGCCCAGCGATGCCAAACGCAAGTTTCACTGCGATATCTGCGCTCGAGATTTCAATTCATACAATGCGCTCAAGTATCATCAATATACGCACACCAAGGAGCGAGCGTATCCGTGCAGCACCTGCGCGCGATCCTTCTACACACAGAGTGCACTGAAGGCGCATGAAAGAACCCATTCCGGCGTAAAGCCGTACAAGTGTGAGAAGTGCGATTTCAAGTTCCGGCAATGGGGCGATCTCAATTACCACTTCATCTCGCGGCACAGCGAGGTGAAGGCGCACATGTGCGAGTACTGCGGCAAGAGTTTCTCCCGGAAGTACTCCCTGGTGCTGCATCGACGCATCCACACCAGTGAACGCAACTATGCGTGCCAATATTGCACAAAAACGTTTCGGGCCAGCTCCTATTTGTTGGCCCACACCAAAGTGCATACGGGCGAAAAACCGTATTCGTGCAGCGTTTGCGATAAGAAGTTTCGCGTGTCCGGCGATCTGAAGCgtcacacacgcatacacgaTCCGGCACGGTTGGGCCAAACCACATCGGAGGCGGCCACAAAGAAACGCAACAATAAACTGAAACAAATCGAGGACGAGGATGTCGAGGCGATCATCAAAAACAAGTCTGATGCCCTGTGCGGTGATGCTGAGCAGGAGATTTTGGGCTTATag
Protein Sequence: MERKEVDTQQFIDHTLLATELMQNNFMMDLMDHTGVFPKTEGPTNLSTTAHHSTTNGGGYVEKHTLTPPELNFHNTIFQFVNKHVVEEPNSARADAVPASPERTPNNYVKDTDVEFLTLNSSFLDRADAAAAATAGGNENVVPQQVPQPTFPALAIEPTVPIDVNAALHGDDLLYAHNASVTNARKVLPHKKRISRKLKGSVCGLMEAELEQHKHQHVVSTVANYSCEICGYAVHTQIEFYAHLKEHYDPGSMQQRLDVPQQQQQQQQQQQKEPLDMCGLSAQDKLQQEQAKLDQVFQDVQLNFENFHNISHVDDDVVDDVGVNMVIHADAMSLHKADDKLSPVGAANATATNAVAVVDDVEFSDTEDMLEGIRNVVDKVSVEDTCDAPWFNNNFSDIAFSGLLLPGEPPPAPPPTAPTPPATSLLKPSSHMEEHAQDDQLTLNFLKQTTQPKLEMGHKKSYIEAIAAAEAAAEAAAAAAATAMTNSSATSISSPNRTPTPNAGSTIEQLQRSPLMLNESFKLEDVETTAPTGSASSSPAATDVIDDNADSYLMEPDKPPVDEPSDAKRKFHCDICARDFNSYNALKYHQYTHTKERAYPCSTCARSFYTQSALKAHERTHSGVKPYKCEKCDFKFRQWGDLNYHFISRHSEVKAHMCEYCGKSFSRKYSLVLHRRIHTSERNYACQYCTKTFRASSYLLAHTKVHTGEKPYSCSVCDKKFRVSGDLKRHTRIHDPARLGQTTSEAATKKRNNKLKQIEDEDVEAIIKNKSDALCGDAEQEILGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00509989;
90% Identity: iTF_00551751;
80% Identity: -