Dgun003527.1
Basic Information
- Insect
- Drosophila gunungcola
- Gene Symbol
- -
- Assembly
- GCA_011057485.1
- Location
- WTSR01004967.1:366770-370915[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00031 0.029 14.7 0.5 2 23 266 288 265 288 0.94 2 10 0.009 0.84 10.1 4.6 2 23 406 428 406 428 0.91 3 10 0.008 0.75 10.3 2.1 3 23 506 527 504 527 0.92 4 10 0.18 17 6.0 3.5 1 19 629 647 629 652 0.93 5 10 0.01 0.96 9.9 0.2 2 23 768 790 767 790 0.96 6 10 0.0005 0.047 14.1 0.2 2 23 840 862 839 862 0.92 7 10 0.007 0.65 10.5 3.6 2 23 913 935 912 935 0.96 8 10 0.068 6.3 7.3 4.2 2 23 949 971 948 971 0.92 9 10 0.0054 0.5 10.8 0.4 2 23 1032 1054 1032 1054 0.95 10 10 0.032 2.9 8.4 0.6 1 23 1152 1174 1152 1174 0.99
Sequence Information
- Coding Sequence
- ATGGCTGCATCCATATATGCCACCCCACCGCCAGATCTGAGCAGCGAGGACACTGCTCTCTCCGATGTCTCCAACTCATCGACACTCAACACAAACaggaacagcaacagcaacaacaacaaccacaaccacaCGACCAGNagcaacagcaacggcaacagcagcaatccACATGAAGCCACAGGAGCAACACCCANNNNNNNNNNNGCCACATCCAGAACGGGAGCACAAGGAGGAGGAGTCACTTCACCCACGGCCCACATGGTTAAGGCAATGGAGCTGCAACTGGAGCCCAAGCCAGCGGGAAGCGGCACAAATGAGGCGGACCAATTGGAGGAGGGGCGCAAGGATgcgctggaggaggaggaggaggagcaggagcaggaggaggagcacgGCGATGCCAACATGGCCACAATGGCGGCAGCCATGCAGCTGCAGCTTCTGGAGGCCCTAAGCGATGCGGCCAAGAAGCGGCGCAAGCAGCACAATCCCAGTCGCTTGGAGGCCCTCAATTTGAGTGGCGAGTCCACTGGTGAAGTGGCACTGGGCCAGAGGAGAGCCGACTCCTCCACCGTGGACTACGACGACAAGCTGTCCAAGATGTTCCTACCAAAGTCCATTGAGCAGCTGAAGGAGACCTTCGAATTGCTGCAGNNNNNNNNNCANNNAACGCAAGAGNCTGATCAACGGCAACAGCACGAACCGGAAGCGGAAATGGAAACGGAAGCGCAAACGGGAGCCATGCCAGACATATCAGAGCCGAGCAAGCAGCGCGAAAACCCCTATCACACCTATTGCAAGCAGTGCGGCGAGAGCTTTGAAACGGAGTTCAAGTTGAGTGTGCACATGCTGCAGGATCATGGCGATGATAGATCCGGTGAGCAGGATCCCGCAGACTTCCTGGCCTCCATCAAGGTGAAACTGGAGCGCGCCGATGTTTCCAGTCCGcagcaagagcagcagcaaatgcAGCCGGACCTCATGACCAACGGTCATGGCAAGGATATGGAGCGCGAGCAGGAGCACTGGTTCCAGGCCATGCAGTCGCAGCATCATCCGCACGGTCATGGTCCCCAAATGCCGCCGGCCTTTCCCTTTCCCCCGGAGGCAGCCTTGGGTCCAGCTGGCTATCTGCCACTGCTTGGCATGTCCGGATTTCCCGGTGTGGATGGGCTCAATCGTCCGCCGCTGCGCATCTTCAATCCCGAGGCCTACTGCGAACTGTGCAACAAGGAGTTCTGCAACAAGTACTTCCTCAAGACGCACAAGGCCAACAAACATGGCATATTCGATCCCGTCGGCGAGTCGAGCACTTCGAACACTTCCAGTCACCACAACAATNNNAACAANNNNNNTATCAccagtagcaacaacaacaatagtgGTCATCCCAATCCCAGCATGAGTTCCATGAGTCAAATGTTCCAGCTGCAGAGGGAGGCAGCTCAGGTGGCCAAACAGGAGTCCACACCAGCAGGTGGTGCAGCATCCACTCCAGTGGCCTCGGTGCACTGTGACATCTGTTCCAAGCGATTCACCAACATCTTTGCCATGCGTCGTCATCGGGCCANGCAGCATGACACTCNGCCAGCCGGTGGTGCCCAGGACTCACCCACTTCGCAGACCGCCCAGCCGTCGCAATCCCATCGAGGCAGTCCCAATGAGCCATCGCAACTGCAGATAAAGCAGGAAATGTCCCAGGAATCGGAGCCCAAGCCGTATCAGTTGCCCGAGGGTTTCCGCGAGGACTTCACcctggagcaggaggagctcAGCTTTGTGCCGCCACCGCGTAAGTTGCCGNNGCATCTCCAGCAGCAGGCCAAGGAGGCCAACTATAGTCCCGACAAGCTGCGTCGCCTGGGCGTCCACTTTCCCGACTTCTTCTGCGAGCTGTGCCACCGCGAGTACGCCAATCGGTACTTCCTGCGCACCCACAAATGGAAGCGCCACGGTCTGTTCGTGCCGCCCGAGGAGCTGGCACCGCAGCCGGCCGGAGCAGGCAAGGAGGAGGCCCAATTGCCTAGTGCCTGGCCCTTTATGCCCCTCAATTTGATGCTGGCCAAGGCAGCGGCTGCCAGCATGGATCATCAGCAAGGGGAGGAGCGCGAGGCGCCGGAAGCTGCAGAACTGGAGTCGGAACAGCCCAGCAAGAGGATCAAACTGGAACAGGAAGCATCGCCAGCCGAGAGCTACGACGAGGACAAGCTAAATGGTTCGGTGGTGGGCCTGCAGAATCTCCAGAAACTGCAGTCCATGCTGCAGCAATTGAACGACATAAATGGCAAACGTCCACTGCCCTGTCATCTTTGTGGCCAGGAGCAGGAGAACCAGTACGCCCTGAGGGCCCACCTCATGACCGAGCACGCTGGCCAGATGCAACTGCCCATGCCCATTCCGATTCCCCTGCCGGATCAGCAGGCCGCACATCCCATGGTCGGCTTCTACCATGCCCAGGGCAATCCGCAGACTCCGCCGGCTCCGGGAGCCAGATCCCCGCCCGGTGGTGAGCTTCGCTGCCAGCAATGCGATCGGGATTTCGCCACGCCCCAGGAATTCAAGCAACATATCGCCGAGGTGCACATGGGCNNNAATGGCGCGTTGGGTGGCAGTCCCCTGCGCGAGGGTTTCTTCACGCCCGAACGCCCAGTGGCGCCGCCAGCGGGCGGAACCGGTGCTCCGGCTGTGCCGTCCGGCAATCGTTCTGCCTACACGCTCACGCCCACCAGCAGCTACTGCGAGATCTGCAACAAGGAGCTGTGCAACAAGTACTTCATGAAGACGCACATGCAGCGCATGCACGGCATCGAGATCGAGAATGGCGCCCAAATCGGCGGAGTGGTGTGCAACATTTGCAACAAGGAGCTCTGCAGCAAGTACTTCCTGCGGGTGCACAAACACAACACGCACGGCATCATCGAGGAGGGATCCCCGCTGCCGCAGCCCAGGGGTCAGAACGGGGTCAAGATCGAggcagctgccgccgcagcagcagctgctgcagcatcgCAGCCGGATCAGCCCATGAATGTCTCACCGCCCACAGTGGAGGGCACTTCCGGCACATCGTCATCCGGCAGCAATCACGAGGTGTGTCCACTCTGTGCGCGTCAGTTCCGCAGCTTCAAGTGGCTGCGATCGCATCTGATGAACGAGCACGGAACCGCCGGAGTGGAGCGGCTGAGGGAATTGGACACCAGCCAATCCTCGGCGCGCAGCAAGCCCAACAGTCCCACGCTCAAGATTCCCAACGGCAGTGGCAATGGTAACCCAACTCCAGCGGGCTCCGGAGCTGGAAATGCCGCTCCCAATCTCGCCCAGGCCCTGCAGAACCTCAATGCCCAGCACCTCTTCGGCCAGATGCAANNNNNNCAGCAGNAGCAGATGCCCAAGATGCCGCCACTTCCGCTGCCGGGCATGTTCGGCGAACCGGCGTCCAGGTTCAAGGAGTACCAGTGCTCACTGTGCCCCTTCACCACGCCCTACTACGCCTTTCTCTTCATccacgagcgctcccacgccCTGCTCAACAACGGCGGCGAGGCCATGGAGTTGCCCCTGGAGACGCCGGCACCGCAACCCTCTCGTAATCCGGCCAAGTCCCGCAGCAAATCCAGCAAGGCAGTGGCCGCACCTTCTCCCATCAAGTCCGAAGAACCGGAGCCTCCTCTGGAGCCCACCAACCTCAGCACCTCGGCACCCAAGGTGGCggcccattcccattccccgGTGNNAGGCACAGGATCTCCAGCTCCAGCCAACAACTCCCCCAAGGCAACCAGCTCAGCTTCGCCCAAGATTCAACGCCGTCGATCCTCCTCGAAGCCTCCAACCACGCCCAATGGATtgggcagtggcagtggcaNTGGAAGTGGAAACgtaagcggaaacggaaatggtgGCCTTCGATCGGCGGCCACCTCACCCTTCGAGGCCTGCAATCAGTTGGCCAACGGAAGCGGCAAGCCGGCCAGCTATGCGCAGCCGGATCGTGCCGAGGAAGCATATCAGATGCAGGCCTTCCACCTGCAGCCCGCCGACGCCGACTCGGAGATGCAGTTTGCCCCCGCCCTGGTCTACTTGCCCGTGCGGGTCCGGGCCTCGGAGTCGGCCACGCTCAGCTTCCGGCTAACACCAGCCTAG
- Protein Sequence
- MAASIYATPPPDLSSEDTALSDVSNSSTLNTNRNSNSNNNNHNHTTXSNSNGNSSNPHEATGATPXXXXATSRTGAQGGGVTSPTAHMVKAMELQLEPKPAGSGTNEADQLEEGRKDALEEEEEEQEQEEEHGDANMATMAAAMQLQLLEALSDAAKKRRKQHNPSRLEALNLSGESTGEVALGQRRADSSTVDYDDKLSKMFLPKSIEQLKETFELLQXXXXXTQEXDQRQQHEPEAEMETEAQTGAMPDISEPSKQRENPYHTYCKQCGESFETEFKLSVHMLQDHGDDRSGEQDPADFLASIKVKLERADVSSPQQEQQQMQPDLMTNGHGKDMEREQEHWFQAMQSQHHPHGHGPQMPPAFPFPPEAALGPAGYLPLLGMSGFPGVDGLNRPPLRIFNPEAYCELCNKEFCNKYFLKTHKANKHGIFDPVGESSTSNTSSHHNNXNXXXITSSNNNNSGHPNPSMSSMSQMFQLQREAAQVAKQESTPAGGAASTPVASVHCDICSKRFTNIFAMRRHRAXQHDTXPAGGAQDSPTSQTAQPSQSHRGSPNEPSQLQIKQEMSQESEPKPYQLPEGFREDFTLEQEELSFVPPPRKLPXHLQQQAKEANYSPDKLRRLGVHFPDFFCELCHREYANRYFLRTHKWKRHGLFVPPEELAPQPAGAGKEEAQLPSAWPFMPLNLMLAKAAAASMDHQQGEEREAPEAAELESEQPSKRIKLEQEASPAESYDEDKLNGSVVGLQNLQKLQSMLQQLNDINGKRPLPCHLCGQEQENQYALRAHLMTEHAGQMQLPMPIPIPLPDQQAAHPMVGFYHAQGNPQTPPAPGARSPPGGELRCQQCDRDFATPQEFKQHIAEVHMGXNGALGGSPLREGFFTPERPVAPPAGGTGAPAVPSGNRSAYTLTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVVCNICNKELCSKYFLRVHKHNTHGIIEEGSPLPQPRGQNGVKIEAAAAAAAAAAASQPDQPMNVSPPTVEGTSGTSSSGSNHEVCPLCARQFRSFKWLRSHLMNEHGTAGVERLRELDTSQSSARSKPNSPTLKIPNGSGNGNPTPAGSGAGNAAPNLAQALQNLNAQHLFGQMQXXQQXQMPKMPPLPLPGMFGEPASRFKEYQCSLCPFTTPYYAFLFIHERSHALLNNGGEAMELPLETPAPQPSRNPAKSRSKSSKAVAAPSPIKSEEPEPPLEPTNLSTSAPKVAAHSHSPVXGTGSPAPANNSPKATSSASPKIQRRRSSSKPPTTPNGLGSGSGXGSGNVSGNGNGGLRSAATSPFEACNQLANGSGKPASYAQPDRAEEAYQMQAFHLQPADADSEMQFAPALVYLPVRVRASESATLSFRLTPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512293;
- 90% Identity
- -
- 80% Identity
- -