Basic Information

Insect: Drosophila gunungcola
Gene Symbol: -
Assembly: GCA_011057485.1
Location: WTSR01005209.1:141612-148633[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00037 0.035 14.5 2.0 1 23 602 624 602 624 0.98

2 9 9 8.4e+02 0.7 1.6 2 23 627 650 627 650 0.70

3 9 6.3e-05 0.0059 16.9 1.4 1 23 656 678 656 678 0.97

4 9 0.088 8.2 7.0 0.4 1 19 686 703 686 709 0.81

5 9 0.0012 0.11 12.9 0.0 3 23 716 737 715 737 0.96

6 9 0.00012 0.011 16.0 3.5 1 23 743 765 743 765 0.97

7 9 0.017 1.6 9.2 0.2 1 23 772 795 772 795 0.95

8 9 0.00016 0.015 15.7 2.2 2 20 802 820 801 823 0.91

9 9 0.032 2.9 8.4 8.7 1 23 829 852 829 852 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00037	0.035	14.5	2.0	1	23	602	624	602	624	0.98
2	9	9	8.4e+02	0.7	1.6	2	23	627	650	627	650	0.70
3	9	6.3e-05	0.0059	16.9	1.4	1	23	656	678	656	678	0.97
4	9	0.088	8.2	7.0	0.4	1	19	686	703	686	709	0.81
5	9	0.0012	0.11	12.9	0.0	3	23	716	737	715	737	0.96
6	9	0.00012	0.011	16.0	3.5	1	23	743	765	743	765	0.97
7	9	0.017	1.6	9.2	0.2	1	23	772	795	772	795	0.95
8	9	0.00016	0.015	15.7	2.2	2	20	802	820	801	823	0.91
9	9	0.032	2.9	8.4	8.7	1	23	829	852	829	852	0.96

Sequence Information

Coding Sequence: ATGGAAATGGGCGGCTTTAAGCGGAAGttggTGGATCAATCACTAAATCTACTGGACAGCCTCAACACGGCATTGCGGTGCGATGCTATTCAATTCTTGCTGCAGACGCTTAAGTGCAAGTACCCGGAGGCCTGCGACCAAGTCGTCAGGAATCTGTTCAGTCACATAGCTGCTNNNAATGACAACGGCGGGGCAGGAGGCGGAGGTGGCGTTGGCGGNNNNNNNNNAAGGGCCCAGCAGCTCGAGCTAGCGAGGACGAagcagctccagctgctgctgaccgccaagaaggagaagaaggagcCTGGCACCGGCTGCGAGGCGGAGATCAAGCGCGAGAACGATGACGAGGAGGCGGGATCGACGGATCTGAACCAAAACTTCGAGAAGATCCTCTGCAAGGAGGAGTTCCTGTGcctcgaggaggaggaggaggacttCCTCGACGATGCGGACACGCAGAACTCGTCTTCCCTGCAGTTCCATGCCGGCAACAATGTGGATGCCCTGGCCCTGGGCCCCGGCGATCCGCTGGACCTGATCCAAACCGGCGTTTCGCTGCTGGTCAAGCGAAAGTATGCGGCCACCTTCGTAGACGAGGACCAGCTGGGNNNNNNCGAGGANNNNNNGgcgaacagcaacagcagcgacgGCAAACTGGTGAAGCGCAAGCGAACCAACAACATGCACCTGACCGTGACTAGTGTGCGGCGGAAAGAGGAGCACAGCCGGCTGGGCGAGGGCTATGTCTTTCACGAGGACAGCCAGTACACGATGCGGTATCACCACAGCACCGGCGAGTTCAGCGAGCGGGCCTTCAAGGCCCAGCTCCGGGCTCTGCTCCGCCTGGCGCTCAGCCAGCACCACAAGCCNNTTCTCCGGCAGTTCTACGAGAACTTTGTTGTGAACGGACGCCTGCTGGGCACCACGCCCTCGGCGCGGTCGGAAACGGAATCGCAGCTTTCGTCGGCTGCCCAAGAGATTATGAAGTTCGAGGAGTTCATTGACGAGGGTGTAGGCGCGGGACGTCTGATCGATGGTCTGGAGATGGAACCCGAGATCGATGACATGCTGGCTGGCGCCGGCAGTGCCTTGGGCAGTGTGAACAGCGCCAGcgggcacagcagcaacagcagcagcagcggcagcgggagCGGCGGTAATGGGAATGGCATCAGCGGTGTGATCCTGGAGAACAATAGTCATCATTCGCATCACCttagcagcagcagcgcaaaTCTTGTGATCAACGGCCTTACGTCAAGCAATAGCAtcagcaacaataataataacaacaacagcaacaatggcaGTCTACACCGCCCGCAACTGACGCTGCAGGAGCAGGATCAGTTGGTGGCGTCCATGAAACCATCACACCACTTGCCCATGTCCATGCCCATGGAGAGCAGGGATCTAAAGGGCAGTCAGGCGGCGCATGGCAATCCCAACGTCGTCATGCCGGGCGGCAGTTCGGCGAGTCACGATTTCCCACAACACGGCACCTCGATGATGGGCAGTCGTCAAATGCCAGCCCTGGCAGCCTTGTCGAACTTGGGCGACACTCCTCCCGTCAGCGGTCAACTGAACTCCTCGCTGGAACTGGACGACAATGACCTGTCGccggacgaggacgacgacgacctGGACCACGACATGGACGAGCTGGACGCGGCCAAGCAGCAACTGAtcgacggcggcagcagcagcagcacctccCTGCAGGCGCCGCCCTCGCAGCACGGCAGCGGCAGTGGAGGCAGTGGGGGTCAGACGCCCGGCAGCAAGAAGGACAAGCCCAGCTACAACTGTCTGCTCTGCCCCAAGTCGTATCGCAAGCGCAAGTCGCTGCTGGACCACTACAAGATGCACCCGGGCTATTGCCACGACTGCGGTCAGCGCAATGGGAATACGCTGGAGgAAATAATCCACCACAACCGGACCATGCATGTGAAGGAGTTCCCGTTCGTGTGCGAGACGTGTGGGGAGTCGTACTCGCGCAAACAGCAGTTTCACGCCCACGTGGAGTCGCATAACAAGAAGGAAATCAAAACCTTTCCCTGCGGCGAGTGCGGGCTAAAGTTTCCGCAGAAGAAACTGCAGCAACACTTCGAGGAGACGGGCCACAAGGCCGACGGGGCCATCTGCGAGGTGTGCGGCGAGGAGTTTCAGTCGAAGAACGCCCTGTATCAGCACATCATCCGCGTGCACAAGCGCGACAACTTCTTCGAGTGCCACATTTGCCATAACCGCTTCACGCTGAAGGCCAACTTGGAGCGGCACGTGCAGCTGCACACCGAGATCAAACGGCCCTACGTGTGCGACCTGTGCGGCTCGTCCTATTTCACATATCCCGCGCTCAAGGAGCACTACAGCAACGCCCACGTGGACGTGTCCGAGTGCAAGTGCACGCTGTGCGGCAAGCGCTTCGGATCGGCCAAATCCCTGCAGCGGCACCTACCATCGCACTCGGAGGAACGGCCGCACTGCTGCAACTACTGCGATCAGACCTTCAAATGGAAAACGCATCTGGTGCGTCACAAGCAGACAATGCACGGAAACGAGCCACCGCCTCCTAAAAAGGGAAAGCAGCGCTTTCCCAAGACGAACGAAGAAGGGGAAATGGGTAGCCTGCCGGATATGCCGGGTCCGCCGCCTGTGAAAGCCACCAAAAAGGCGcagcaacaccagaaGGGCGCcgcggccacgcccacgccgccACCGCCAGTCTCGACGACTCCGGGCTGCCTGCAGCAGGATCAGTTCAACGCGGCCATGGTCAGTAGCAACAGCTCGCAATCCTCCACGGCATCCACGTCGCAGCATTCGGTGTCGACGAGTGAATCTCAGCAGAATTCCATCAACCAGCAGGTTGAGCTCAAAGATAACAAATTCTATATAGTGGAGTCGGCCGAGTTCCTAGGGCTTCCAATGAATGCTCAGGCGAATTCGAGTGATCCccacaactacaacaacatcGGCAGCATACTCACGAATCTCATTGACACAAATCCCGCGCCAATGGAGTACAATTTCGACCtgatgcagcagcaacaagcggCGTCGTCTCAGCAACAGCANNNNNNNNNNNNGGCGGCNNNNNNNcagcagcagcagcatcacgGCGCCGGAAGCTATGCGAGCGGTTTGATGCGCAGTGGAGGCGGCGTGTATGGAGGAGCCTATGACCAGCACCTGAGCGACCAGCTGGTCAGCGAGCAGCAGAAACAGAACAGCTTTCAGCCCTATCACCCACATGGCCTGCAGCCGCAACAGCNNNAGCAGCNNNCATTGCATCCGCACCTGCTGCCTCCGCCAGCGCCGCACAGCAACGTGTACGACCGCACGGGAGttggagtgggagtgggagtagGTGTCGGAGTNNNTGTGGGCTATTCAATGCTGGGAGACGACCCGAAGGGTGTGCTGCCGTCCATGATGGGCGGCATGATGCAGCAAATGCCGCCGCATGGCCAGCAGCCGGATCTAATCTACTACCCAGTGAAGAACGATTGA
Protein Sequence: MEMGGFKRKLVDQSLNLLDSLNTALRCDAIQFLLQTLKCKYPEACDQVVRNLFSHIAAXNDNGGAGGGGGVGGXXXRAQQLELARTKQLQLLLTAKKEKKEPGTGCEAEIKRENDDEEAGSTDLNQNFEKILCKEEFLCLEEEEEDFLDDADTQNSSSLQFHAGNNVDALALGPGDPLDLIQTGVSLLVKRKYAATFVDEDQLGXXEXXXANSNSSDGKLVKRKRTNNMHLTVTSVRRKEEHSRLGEGYVFHEDSQYTMRYHHSTGEFSERAFKAQLRALLRLALSQHHKPXLRQFYENFVVNGRLLGTTPSARSETESQLSSAAQEIMKFEEFIDEGVGAGRLIDGLEMEPEIDDMLAGAGSALGSVNSASGHSSNSSSSGSGSGGNGNGISGVILENNSHHSHHLSSSSANLVINGLTSSNSISNNNNNNNSNNGSLHRPQLTLQEQDQLVASMKPSHHLPMSMPMESRDLKGSQAAHGNPNVVMPGGSSASHDFPQHGTSMMGSRQMPALAALSNLGDTPPVSGQLNSSLELDDNDLSPDEDDDDLDHDMDELDAAKQQLIDGGSSSSTSLQAPPSQHGSGSGGSGGQTPGSKKDKPSYNCLLCPKSYRKRKSLLDHYKMHPGYCHDCGQRNGNTLEEIIHHNRTMHVKEFPFVCETCGESYSRKQQFHAHVESHNKKEIKTFPCGECGLKFPQKKLQQHFEETGHKADGAICEVCGEEFQSKNALYQHIIRVHKRDNFFECHICHNRFTLKANLERHVQLHTEIKRPYVCDLCGSSYFTYPALKEHYSNAHVDVSECKCTLCGKRFGSAKSLQRHLPSHSEERPHCCNYCDQTFKWKTHLVRHKQTMHGNEPPPPKKGKQRFPKTNEEGEMGSLPDMPGPPPVKATKKAQQHQKGAAATPTPPPPVSTTPGCLQQDQFNAAMVSSNSSQSSTASTSQHSVSTSESQQNSINQQVELKDNKFYIVESAEFLGLPMNAQANSSDPHNYNNIGSILTNLIDTNPAPMEYNFDLMQQQQAASSQQQXXXXXAAXXQQQQHHGAGSYASGLMRSGGGVYGGAYDQHLSDQLVSEQQKQNSFQPYHPHGLQPQQXXQXXLHPHLLPPPAPHSNVYDRTGVGVGVGVGVGVXVGYSMLGDDPKGVLPSMMGGMMQQMPPHGQQPDLIYYPVKND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -