Basic Information

Insect: Drosophila gunungcola
Gene Symbol: -
Assembly: GCA_011057485.1
Location: WTSR01004727.1:302873-306442[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00066 0.062 13.7 0.3 1 23 477 499 477 499 0.99

2 7 0.36 33 5.1 3.5 2 23 508 529 507 529 0.95

3 7 0.00066 0.061 13.7 0.7 1 23 538 560 538 560 0.98

4 7 2.9e-05 0.0027 17.9 0.2 3 23 634 654 632 654 0.97

5 7 0.0005 0.046 14.1 1.0 1 23 662 686 662 686 0.98

6 7 1.6e-07 1.5e-05 25.0 2.2 1 23 692 714 692 714 0.98

7 7 0.00017 0.015 15.6 0.1 1 23 720 742 720 742 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00066	0.062	13.7	0.3	1	23	477	499	477	499	0.99
2	7	0.36	33	5.1	3.5	2	23	508	529	507	529	0.95
3	7	0.00066	0.061	13.7	0.7	1	23	538	560	538	560	0.98
4	7	2.9e-05	0.0027	17.9	0.2	3	23	634	654	632	654	0.97
5	7	0.0005	0.046	14.1	1.0	1	23	662	686	662	686	0.98
6	7	1.6e-07	1.5e-05	25.0	2.2	1	23	692	714	692	714	0.98
7	7	0.00017	0.015	15.6	0.1	1	23	720	742	720	742	0.98

Sequence Information

Coding Sequence: ATGAGNGTCCTGGCGTATCCACGTACCAACGATGAGGAGATTTTCCGTCACTGCACCAAGGACTGCGGAGTGGTAACGGCCACGGAGGACTTCCAGTACTTCGCCCTGCGATGTATATTCTGCAGCGAGAAGTTCCTGTACTTCGACTCGTTCATCGGCCACATGCAGACGGTGCACCTGGGCGACCAGTCCGTGGCGAATCCCGCCTCCGTTTCGCGTTCGGGCTTCAATCTCGGCGAGCCGATGTCCCTGTCCAGTCGCAACGGCGACCTGCCCAACTTCCACGAGATCGAAGACTTAACGGACGCGGACACGGCGCTGCTGGAGCCCCAGATGGTCATCAAACAAGAGCTGCAGGACCTGCCCTGCAGCGAAGATGATATGGCCGGCGACGAGGATGACGACGACCATCGGCTGCCCGATTCCGATGCCGGCGATGATGAGGACGAGGCCATACTGCCCGAGAGCGATGTCCCGGTGGTCAGCTCCGCGCCACGGCCGCGCAAGAAGGTCACAAAGCAGCGCCAAATGGACATCTCCAGCGAGGCACTTATCGTCGGCGATGGCGACTCCTCGTTCGACGACTACGGCGATCCGGACAACAGCTACATGGACGATAATTCCGGKGAGTACATGGACTACACCGGCTTCGACGGCGCCAACCACAGTGGCCTCGGTCCCGAATCGGACTTCCTCAGTTACGATGAGATGGTGGAGGAGTCCTTGTTGGGACGCGACCGGGAGGTGACGATGCACATCAAGGACCGCAAGATGATCCAGTTCCTCATCCACTCGTATCAGCGCAACCCCTTTCTGTGGGATCACGGCAACGCACAGTTCCGGGATCGCGTGAAGCGCGCCCGCTTCCTCGACTGGATCGTGCTGGAGTTCAAGAGTCGCTTCAACATCTCGCTGGCCAAGGACGCCATCACCCGCAAGTGGGACAACCTGCGGACGGTGTACAAGCGGGAGTGCAATCGCATGGCCCTGGAGAAGACCAACATCAGCACGCTGTGGTACTTCAAGGAGCTGCACTTCCTCAACGAGGTCTACAGCTACAACGACAAGATGTCCGATGCCGTGGTCAAGGAAACCTCCTATCGCCGCCGCTTTTCGGCCATTTGGAATGACACGTCCACGTCCAAGCTGCTGAGCATGGTGAAGCGGTACCAGTGCTTCTACAACCNCTTCGATCCCGACTACCGCAGCAAGGAGCGGCGGGGCGAGGGACTCCACCAGATGGCCATTGAGCTGCAGCAGCNGNNCGACGTGACCACCATCCAGNNCTCGAAGCGCANCTNGCAGCTGCGGTTCGATTACTCCAAGCAGAAGATGGAACGCCTCAATAGCGAACGCCTGGGCAAGNAGTTCATTGCCAACTACATATACTACGACCAGATGCACTTTATGGACGACGACATACCGCCGTTCAAGTGCCCGCACTGTCCGGAGATTGTGCAAACACTCAGGGAACTGGACCTTCACATGCTCACCCACCAGCCCAGTTTGGGTGGCGGCTGCTACTGCAACATTTGCAGCATTCAGTTCCACAACGCCGAGGAGTTCGACAGCCACAAGCAATTGCATTTGCGCGGCGTGGCCGAGGTGAAGTTCAACTGCGAGCTGTGCACGGCCAGCTTCCGGGAGAAGGCCAACTATGATGAGCACCTGCGGCGCCACAACGAGGAGCTGTTCCTGCCCTCGCTGGCGCTGAATCACAGCATCATGGAGAGCGGCGttgcggaggaggaggaggccagaGCCGNAANCGAGGAGTCCAGGGGYAGTGGCANNNGCCGGAAAAAAAGGGCWGGTCAAGCGTCCAAGTCACCCGAAGTCCTGGCCGAYGATGAAGATCCAGTTAGCGGCGGAGGCAGTGACATTGCCAAGCCGTACGGATGCGAAGTRTGCCGTCGCAGCTTCGCCACGCCGGGCCACCTGAATGCGCATCGAATTGTCCACCAGGATGAGCGGGAGCGGTGCTACAAATGCGACTATCCGCAGTGCAATAAATCGTTTGTGGCGCGCAACAGCCTGTTCGAGCACCTGAAGCAGCACTACAGCAACGAGGAGTTCAAGTGCGACATCTGCGGCAAGACGTTTAAGTCAACAAAGAATCTGCAGAACCACAAGCAGATCCACGACAAGGTGAAGCGCTACGTCTGCCAGATTTGCGGCTCGGCGTTCGCCCAGGCTGCCGGACTCTATCTGCACAAGCGTCGCCACAATCGACCCAACGGAGCCGTCGGCGCCGTCGGACGTTCGGGCCGTAGCAGTCTGNGAGANAGGGAGTGGGAGagggacaaggacaaggacaaggataAGGNCAAGGNNAAGGNTTGGTACAAGGCCAAAACTCGAGGTCGGGGGCGGGGTCGTGGCCGCGGGCGTGGTCGCTATGTCAAATAG
Protein Sequence: MXVLAYPRTNDEEIFRHCTKDCGVVTATEDFQYFALRCIFCSEKFLYFDSFIGHMQTVHLGDQSVANPASVSRSGFNLGEPMSLSSRNGDLPNFHEIEDLTDADTALLEPQMVIKQELQDLPCSEDDMAGDEDDDDHRLPDSDAGDDEDEAILPESDVPVVSSAPRPRKKVTKQRQMDISSEALIVGDGDSSFDDYGDPDNSYMDDNSGEYMDYTGFDGANHSGLGPESDFLSYDEMVEESLLGRDREVTMHIKDRKMIQFLIHSYQRNPFLWDHGNAQFRDRVKRARFLDWIVLEFKSRFNISLAKDAITRKWDNLRTVYKRECNRMALEKTNISTLWYFKELHFLNEVYSYNDKMSDAVVKETSYRRRFSAIWNDTSTSKLLSMVKRYQCFYNXFDPDYRSKERRGEGLHQMAIELQQXXDVTTIQXSKRXXQLRFDYSKQKMERLNSERLGKXFIANYIYYDQMHFMDDDIPPFKCPHCPEIVQTLRELDLHMLTHQPSLGGGCYCNICSIQFHNAEEFDSHKQLHLRGVAEVKFNCELCTASFREKANYDEHLRRHNEELFLPSLALNHSIMESGVAEEEEARAXXEESRGSGXXRKKRAGQASKSPEVLADDEDPVSGGGSDIAKPYGCEVCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKSFVARNSLFEHLKQHYSNEEFKCDICGKTFKSTKNLQNHKQIHDKVKRYVCQICGSAFAQAAGLYLHKRRHNRPNGAVGAVGRSGRSSLXXREWERDKDKDKDKXKXKXWYKAKTRGRGRGRGRGRGRYVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00486859;
90% Identity: iTF_00565600;
80% Identity: -