Dgun013644.1
Basic Information
- Insect
- Drosophila gunungcola
- Gene Symbol
- ZFAT
- Assembly
- GCA_011057485.1
- Location
- WTSR01005021.1:235699-239404[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 8 7.5e+02 0.8 1.5 3 13 63 73 62 78 0.81 2 12 0.0034 0.31 11.5 0.5 1 23 200 223 200 223 0.96 3 12 0.00021 0.02 15.2 4.3 1 23 228 251 228 251 0.94 4 12 1.5e-05 0.0014 18.9 2.0 1 23 256 278 256 278 0.98 5 12 7.9 7.4e+02 0.8 5.7 1 23 284 308 284 308 0.94 6 12 0.00067 0.062 13.7 4.2 3 23 319 340 318 340 0.95 7 12 0.0011 0.098 13.0 0.4 2 23 390 412 389 412 0.95 8 12 0.00031 0.029 14.7 0.7 1 23 440 462 440 462 0.97 9 12 4.6e-06 0.00043 20.5 2.1 1 23 469 491 469 491 0.96 10 12 0.00013 0.012 15.9 0.2 2 23 497 518 497 518 0.97 11 12 0.00035 0.032 14.6 0.8 1 23 525 547 525 547 0.99 12 12 2.3e-05 0.0022 18.2 3.1 1 23 553 576 553 576 0.98
Sequence Information
- Coding Sequence
- ATGGAAACGTGTCGCACCTGTGCGATTTCCATGTTTGTTTGCGACTTCGAGAATGGCAGCAATAACAGCCACTTCCTGGACCTCCACAATCCCAACTGCTGGCCAAGCGAAATGGCCCAAATACGCCTGCAGTTCGTCAACTGGAATCTCAAGATATCACCAAATGATGGATTGCCTCAGAAGATCTGCAGCGACTGCTTTACAAAGTTCTGCTCGATAAACGCATTCCGAGTGGCCTGCCAGGAGGCGCAGTTGAAGCTGTCAAATATTTACGACAAGATCGATGCCAGCAGCCTGGAGGAAGAGCACCAGGAGGACTTGGACCAAGCAGAGGAGCAGAGGGGAACCGAAACAACCAAACCAACAACGACGGTTTCAGCCGAAACACAACCAAACACTGCCACTGACCCCACAGAAATTTTCGTGGATGCCGTAGACATcgaagaggaggaggtggagcaACCGCCGGAGGAATCTGCCTCTCCGGAACTGACCATTAGCTATGCCTGCAAGTTCTGCTTGAGGCCGCAGGAAAGATACCAGCTGCAACAACTTTTGCTAGAGCACATCAATGCCAGCCATGATTCAGAGCAGCCGTACAACTGTCCGGAGTGCGAGGCCTGCTTCCAGGATGCCGCTTCGAGGACCGTGCACTTGAAAAACAGCCACGTGGAGAAGCAACACGCCTGCGAGGTGTGCGGCAAGAAGTACGGCGATCGACACAATCTGCGCCACCACGTCGAAAAGTACCATTCGGAGACGGACTTCGAGTGCGGACTATGCGAGAAGCGCTTCTACACCCGCAAAAGCCTTAACTACCACATGAAGTGGCACAATCCGGACCGCCAGTTCAAGTGCCGGCACAGCGGCTGCGAACGGCTCTTCATCAGCCAGCGCCACCTTATGTGCCACGAGGCCACCCACACGGGCACCAGCTCCAGGAAAAGCGAGCACTGCGGCTTCTGTGGAAAAACCTTTATTCATCTGAAGACCCTTCGTTGGCACATCTTTAGACAGCACGGCGGAGAGAAGCCCTACAAATGTGCAAATTGCACGGAGGCATTAAACCTTGTCTNNCCNGATTCCACAGTTTTCGCATCATATGCCGAGAAGCGGATCCACATGCTGGAGCGGCATAGGGAGAACCTAACTGCCATCGAGCGGAGCGAATGCATGCTGTGCCGCCAGCCCTTTTCCAGCGAGCAGGATCTGATCCATCACATGTCCGTGGAGCACCTGCAGCGTCCTGGAGCTCCGGTGATCGCCAACAATAAGCGGGTGCTGCAGCAGAAGCGGGAGCGCCAGTATTCCGGACTCTTTCAGTGCGGCAGCTGCACACAGCGGTTCAACATGAAGTCGGCGCTGGAGCGGCATTNCGCCGTCCACTCGGAAAAGGATAGGCCGCACGCCTGTCCGCAGTGCTCCAAGCGGTTCAAGCGCGCCCAGGACATGAAATGGCACATCAAGACTCACGAGAAGNNNNNGAATGTCTGTGATGTCTGCGGCAAGGCCTTCGCCCTAAAGTATGTGCTAAAACAGCACCGATTGAGCCATGAAGTCTTGGAAAAGAACTTCAAGTGTAATGTTTGCGGTAGGGCATATTTGTTCGAGAAGTCTTTGCGGCTGCATCAGCGGGTTCATACCGGCAAAACCTACTACAAATGCGATGTCTGTCAAGAACGATTTGTCACGCACGTTAAGCTTAAAACTCACATGCAAAAGTCTCACGCCTCTCAGCCGCACTCTGATTTGGATAAAAATGATCTGATCAACATTGTGATTTCCTAA
- Protein Sequence
- METCRTCAISMFVCDFENGSNNSHFLDLHNPNCWPSEMAQIRLQFVNWNLKISPNDGLPQKICSDCFTKFCSINAFRVACQEAQLKLSNIYDKIDASSLEEEHQEDLDQAEEQRGTETTKPTTTVSAETQPNTATDPTEIFVDAVDIEEEEVEQPPEESASPELTISYACKFCLRPQERYQLQQLLLEHINASHDSEQPYNCPECEACFQDAASRTVHLKNSHVEKQHACEVCGKKYGDRHNLRHHVEKYHSETDFECGLCEKRFYTRKSLNYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHTGTSSRKSEHCGFCGKTFIHLKTLRWHIFRQHGGEKPYKCANCTEALNLVXPDSTVFASYAEKRIHMLERHRENLTAIERSECMLCRQPFSSEQDLIHHMSVEHLQRPGAPVIANNKRVLQQKRERQYSGLFQCGSCTQRFNMKSALERHXAVHSEKDRPHACPQCSKRFKRAQDMKWHIKTHEKXXNVCDVCGKAFALKYVLKQHRLSHEVLEKNFKCNVCGRAYLFEKSLRLHQRVHTGKTYYKCDVCQERFVTHVKLKTHMQKSHASQPHSDLDKNDLINIVIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00491676;
- 90% Identity
- iTF_00505570;
- 80% Identity
- -