Dgun009347.1
Basic Information
- Insect
- Drosophila gunungcola
- Gene Symbol
- -
- Assembly
- GCA_011057485.1
- Location
- WTSR01005181.1:530234-535057[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.00054 0.05 14.0 1.0 1 23 206 228 206 228 0.96 2 21 1.6 1.5e+02 3.1 3.8 1 21 234 254 234 256 0.84 3 21 0.0034 0.31 11.5 3.0 2 23 288 309 287 309 0.97 4 21 0.002 0.18 12.2 1.6 1 23 382 405 382 405 0.94 5 21 0.069 6.4 7.3 1.4 1 23 445 467 445 467 0.98 6 21 0.61 57 4.3 0.1 2 23 478 499 477 499 0.96 7 21 0.085 7.9 7.0 1.1 1 23 576 599 576 599 0.96 8 21 0.0013 0.12 12.7 1.1 2 22 609 629 608 629 0.94 9 21 0.017 1.6 9.2 1.8 1 23 638 660 638 661 0.95 10 21 0.00047 0.044 14.1 1.5 2 23 684 705 683 705 0.97 11 21 0.0002 0.018 15.3 7.3 1 23 713 735 713 735 0.97 12 21 9.6 8.9e+02 0.6 2.0 3 23 773 793 771 793 0.78 13 21 0.00059 0.054 13.9 0.5 1 23 875 898 875 898 0.94 14 21 0.01 0.96 9.9 0.9 2 22 906 926 905 926 0.93 15 21 0.085 7.9 7.0 3.5 1 23 935 958 935 958 0.94 16 21 3.2e-05 0.003 17.8 2.9 2 23 978 999 977 999 0.97 17 21 7.9e-05 0.0074 16.6 0.5 1 23 1006 1028 1006 1028 0.98 18 21 0.081 7.5 7.1 0.0 2 21 1055 1074 1054 1075 0.92 19 21 0.013 1.2 9.6 4.7 1 23 1125 1148 1125 1148 0.96 20 21 0.0024 0.22 11.9 1.0 1 23 1185 1208 1185 1208 0.96 21 21 0.00082 0.076 13.4 2.0 1 23 1235 1258 1235 1258 0.97
Sequence Information
- Coding Sequence
- ATGCTGCCAACCGATATTTGCCGTACTTGTGCCCTGCAAAACAGCAATTTACTGCCCTTATCCACTTGCCTGGCCAGAGACGCCACCAAAAGTCTCTACGCTGTGCTCCAGGAACTCACGCAAATTGATCGAGAGAGCGCGGATGACAATCTACCGCAGCATCTGTGCACAGATTGCTGGACAAGATTAGAGGACGCCTACGCCTTTGTGGAGCAGGNNNGAGAAGTCAATGGAGAACTCACAGCTCGCTTGAGGGAATGCCTGGATGAGATGCCCATTGATATTCCCCAAGAGCAGAGCATAAAAACCGAAGTGGACCTTGACGATGGGGGCAACAAGTCCGAGGTGGATGTGGACGCTACTGGGATGGAGACTTTGGAGCTTAAATGGCGGCCGGAAAGTGCCAGCGATGAGGACTTTGCTGATGCAGCAGAAAGCGATGAGGACAAAGGTGATCAGAAGCCCTATCATCTGCGACGAAGCTATCGAAAAGTTAAGCTGCCAGTGGAAAGCGAGAATGAGGATGTTAAGCCAACTGAACCATCGCCAATCAAACGCCGTCGAGGACGTCCGCCTGGTTCTGCCAAAAGCCAGTCGAAGACCACTGATGGTCGCCACGCCTGCGAGGTGTGCGGTAAGACCTTTTCGTGGTACCGTGACATGCAGCGCCATGCCAGGATGCACTTTGAGCAGGCCTCCTTCGTCTGCGACACCTGTGGCAAGGGATTCCTGCGCAAGGACAAGTACACGTTCCACCTGCGCTGCCACAAGAAACGAGAGGCAAAATGGAAGGCTCTTCAGCTGGGAAACGAGTGGCGCTTTGCCGAGCGCCTCTACAGCTCCGGCAGCCTGAAACGAGTCGAATGCAAGCTATGCGGGCTGAAGTGCACGCACATAGAAGAGCTCAGAAGTCACCTAAAAAGCCACGTGGACTTGGAGACTTTAGTCAGTTTAAGAAAGGATAGTGATGTGGTCAGGGAACATTTCCCCGGGTTGCCCTGTGACTTGGATATTATCAAGCAGCAGATCAGCGCTGACATTGCCGAAGGGCAAACGGAGAAGTTTGCCTGCGTTGTTAATTTCCACGGCTATGAGCTGGGACTCAGCGATTCGGATGATGAGAGTGCCAGCCTGGATTCTATATACAATTGCTCTGTGTGCAATCTCCCGTTCAACCGCAAACACCGCCTGGTGAAGCACACTTTGGAGGAGCATTCACAGACCTCCACAGCGCTTCCCTGGCAGCGCTGCAGCTTCtgtaaaattggttttctcTGCTCAACACTCTACAATCAGCATTTGAGCAGCCATTGccacagcaaaataaaacgatATCGTTGCCGCAAGTGTCCTGGCAAGTTTATGTGGCCGGAAAACCTACAGAGACACGCCTGCTCCCATCGCCGTGAAGGAACTATGCCCAGGCACATATCCTGCTCCCTGTGTGATTCTCCGCTGGCCAGTTTGGCGCGACTTCGTATTCACTTAACCACACACCAACTTGATTTGAATGGCATCAGCCCGGAGTACAATTCCTCCTTCTTTCGCTCATTTTACCCTAATGGATTAGACTGCTCTGCCGCTGATTTGGCTGCCCGCATAGCTGAAGATTTCGAAGTGCAGGATTTCGATCGCTATTACAATGCCTGCACGGAAAGTGGACAGGAGCTGGATCTCTTTGATTCTGAATCGGAAGAGAGTGATNNNNAGACTAGCAAACTTTCTCATACCTGTCTGCTGTGTGGAGAAACTTCGAGTACCCTGACGATCCTAATGCAGCATCAAAAGAAAGTTCATTCTAGTGGGTCCATTGCTCTGCCCTGCACCTGCGAAAAGTGTGGTTCTGGTTTCGTAAGCAAAGCCCTGCTTCAACAACACCGCAGGCGCAGCTGCGGCCAGAAACACTCCCGGTTCTACTGCCAGGCTTGCAATCTTCGATTCGTTTGGCAAGCCAACTATGAGCAGCACCTGAGGACACACCATGACACCGTAAAGAAATATGATGAAGAGACAATGGCTGCTAAACAGGTTTATTGCGCCACCAAGCTGCAGTGCGACGAATGTGATAAGGTATTTATCTGGCACAAAGACCTCACGCGTCACAAGCGATTGCATCAACCCCAATCGGCAGCCCAGTTCGACTGTCCCCATTGTCATCGCAAGTTCCACCGTAAGGATGGTCTCAAGTCCCACCTAAAAGTGCATCCGGGAGCACCGGAGAATCTCAAGGAAGAGCCTGCCACGGCCCACGTTGCGCCAGGCCAAGGAATGGCTCTGTCGCGGCTCAGTCGTCCTCATGGTTGCAAGCTGATTCAGTGCATGATCTGCCTCTCGCGCCACTCGAAGATTAGTGATCTTCGGACCCACCTAAAATCGCATCAATACGGATTAAGCTTGTCCGCTGAGAGAGATACTGCCAGTGCATCAAGATCTTTTTACCCGGAACTAGAGATTGTCTTAGAACGAGAAAAGTTGGCCGGGAAAATTATGGCCGATGTGGAAAGGGACCTAGAGTTGGATCGTTTTGTTTCCATAACCAACGAGGCTGGCCTCGAACTGAATCTCGACAGCAGTGAAACTGATTCCGAATccgagcaggagcaggataTATCAGAAAAATGCTATGCCTGCAATCTCTGTTCGACGGTTGTAAGAAGAAAATATCAGTTGTTTGCGCACCAACTGGAGCAGCACGAGATGGAGGAGACATGCCTCGTTTGCTCCCATTGCCAGGTTAGGTTCGTCAACGAATCCCTGCTGGATCATCACTCCCGGACACTGTGCTACAATCCCCAGAAGGTTTTCCAGTGCCGCAAGTGTCCGCTTCGCTTTCGGTGGCGGGAGAACCTAAAGCTTCACACGAGTTTGTGCCATCAGCAAGGCGAAATCCCAATACCCGACGAATCCTCTCAAGCAGTTGGTGCGGACCTACAGTGCGGGGAGTGCCATCGCAGCTTCAAAATGCAAAAGGATCTCACGCGACACACACTGATGCACGCCCAGGAGTCGAACATCTTCAGGTGTCGTTGGTGTGCTCGTCGCTTCTATCGCTGGGCCAATCTTCTGCAGCACATTGCGCGCCATGGCATAAGTGTTGACCAACTGCCCTATGCGGAAGCAATTTTAGACTCATATGGCAATCCTGGAGGTCACAAAAAGGTAGAGTGCCGCGTGTGCAGCTTGAGCTTTCCCACAATCGCTGCCTTGCGTCTGCACCTCGAAACAATGCCCGCTGGAAGTCACCACGAGCTGTCCTCACTCCAAAACTACTCGATTACCAACCAGATGGGCTTCGAGATGGAGCTGGATGACTCGGAGACTGATGAAGAAGACGGCAGGACACATTCGAAACCACCTGGCGTCCCTGANNNNTACACCTGTGGCATGTGTCAACTGCGATGTTCGCGCAAATTCGAGCTGCATCAACACCAGCAGGCCATGCACCGAATGGAAAAGATTCCCGACGGCTGTGATAGGTGCCTCTTCAAGAGCGTCTGCCCGGAAATAATTGTGCATCATAGGAAGACACAGTGCGAGAACCGGGAAAAGCAGTTCACCTGCACTCGCTGTGGTTACAAGTTCATGTGGGAGTCCAACCTGCTGCAGCACATGCAGTTGCAGCACGAAAAGCAAGAGGATCAGGAGCTGGATGAGTCCAAGGAGGCGTCTGGTGACGAGCCAAAGGCCGAAGTGGGTCAGGTGTTTCAGTGTGGTCTTTGTCCAAGAAAGTACAACCGCAAGGATCGACTCACGGCCCACTCGAAGAAGTTCCATGGGCCCGATGGCAAGGGGTCCAATCCAGTGAAGGGAACGGCCCTCAAGAACCATCGAATGCAGCAAAATCACTACGAGGAGGGGCAGGAATCAGGGGATCCCCCGAGACGCACGGTTCNGGAACANTTTACTATANAGGAATGA
- Protein Sequence
- MLPTDICRTCALQNSNLLPLSTCLARDATKSLYAVLQELTQIDRESADDNLPQHLCTDCWTRLEDAYAFVEQXXEVNGELTARLRECLDEMPIDIPQEQSIKTEVDLDDGGNKSEVDVDATGMETLELKWRPESASDEDFADAAESDEDKGDQKPYHLRRSYRKVKLPVESENEDVKPTEPSPIKRRRGRPPGSAKSQSKTTDGRHACEVCGKTFSWYRDMQRHARMHFEQASFVCDTCGKGFLRKDKYTFHLRCHKKREAKWKALQLGNEWRFAERLYSSGSLKRVECKLCGLKCTHIEELRSHLKSHVDLETLVSLRKDSDVVREHFPGLPCDLDIIKQQISADIAEGQTEKFACVVNFHGYELGLSDSDDESASLDSIYNCSVCNLPFNRKHRLVKHTLEEHSQTSTALPWQRCSFCKIGFLCSTLYNQHLSSHCHSKIKRYRCRKCPGKFMWPENLQRHACSHRREGTMPRHISCSLCDSPLASLARLRIHLTTHQLDLNGISPEYNSSFFRSFYPNGLDCSAADLAARIAEDFEVQDFDRYYNACTESGQELDLFDSESEESDXXTSKLSHTCLLCGETSSTLTILMQHQKKVHSSGSIALPCTCEKCGSGFVSKALLQQHRRRSCGQKHSRFYCQACNLRFVWQANYEQHLRTHHDTVKKYDEETMAAKQVYCATKLQCDECDKVFIWHKDLTRHKRLHQPQSAAQFDCPHCHRKFHRKDGLKSHLKVHPGAPENLKEEPATAHVAPGQGMALSRLSRPHGCKLIQCMICLSRHSKISDLRTHLKSHQYGLSLSAERDTASASRSFYPELEIVLEREKLAGKIMADVERDLELDRFVSITNEAGLELNLDSSETDSESEQEQDISEKCYACNLCSTVVRRKYQLFAHQLEQHEMEETCLVCSHCQVRFVNESLLDHHSRTLCYNPQKVFQCRKCPLRFRWRENLKLHTSLCHQQGEIPIPDESSQAVGADLQCGECHRSFKMQKDLTRHTLMHAQESNIFRCRWCARRFYRWANLLQHIARHGISVDQLPYAEAILDSYGNPGGHKKVECRVCSLSFPTIAALRLHLETMPAGSHHELSSLQNYSITNQMGFEMELDDSETDEEDGRTHSKPPGVPXXYTCGMCQLRCSRKFELHQHQQAMHRMEKIPDGCDRCLFKSVCPEIIVHHRKTQCENREKQFTCTRCGYKFMWESNLLQHMQLQHEKQEDQELDESKEASGDEPKAEVGQVFQCGLCPRKYNRKDRLTAHSKKFHGPDGKGSNPVKGTALKNHRMQQNHYEEGQESGDPPRRTVXEXFTIXE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -