Basic Information

Gene Symbol
-
Assembly
GCA_011057485.1
Location
WTSR01005170.1:1718070-1719900[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.00015 0.16 12.0 0.1 1 45 42 101 42 102 0.89
2 4 0.00096 0.99 9.5 0.0 1 30 175 215 175 221 0.75
3 4 2.8 2.9e+03 -1.7 0.0 4 16 303 315 303 319 0.78
4 4 0.27 2.8e+02 1.6 0.0 26 43 341 359 334 361 0.82

Sequence Information

Coding Sequence
ATGAGCAAGTTTGCGAAATTTAATGGCAATGACGAGGACGAAAATGAAATCGAGCAGAAATATGCTCACATATTAGATCTGGAAAATCCATCGGTATTGGACAACAGTTCTGGAAAAGCCATTCGCTGCAAGTGGACAGACGAAGAGGTCGAATTCTTTCTGGGAATTGTACACCAAATGAAACTGCAATCTCCACTGCGAAAAGCACGCAATGAAAAGGTGTTCAAGGTGGTATCCAGAGCAATGGGCAAACGCAACTGTCCCAAGACCCCGAAGCAGTTGAAGATTAAGTTCCAACAGTTGCGGAGGCAGTATGTGAGGTGCAGGAGGAGTGGCGGCGAGCCGTTCGAGCACTTCGAGGCAGTCCACGAGTTACTGCAGGGAAACGGAGACTCCGATCTGGAGGCGGAACTGGAGAGTGACTCCGATGGGGAGGCCGACGAGGACCAGTCTATCCAGATTTCGGAAACCGAAGGAGATGATGCCTTGGACGCCTCTTCTTCGTCGATTAACATAAATGCCCGTTGCAAGTGGACCGAAGGCGAGGTGGACCTTCTCCTAAATCTGATCCACTCCCTGGGCCTGCGGACTGCTTTGCTGCGAAAGCGCAATGCGAAGGTCTTcaagctgctggccaaggagATGGCGAAAAGAAACTGTAAAAAGGGTGCGGACAAGCTGCGCATCAAGTTCCAGCTGCTGCGACGGATGTACAACAAGGTAAAGAATGGCACCGGCGAAACTTTCGAGCACTTTGAGGCCATGCGACAGGTCCTGGATCCCACGGAAGAGGAGGCGGCGGCCGCGGAGGCTGAAGCGGAGGCCAATCTGAGTAGCGCCAGTGATAGTGAGGAAGATAGTGAAGAGGAAGAGGGTGATGCCTCACACAAAAGCGGAGCTCACTTTTGGACGGACGACGAGGTGGACTCCTTTCTACTCATCATAAGGGCAAATGGCTTCTTTCAAGCATTAGATGGCTCGAGGAAACGTAACTTTCAGACCCTAGCCCATATTTCCAATATCCTGGATAAGCAAGGCATTAAACGCACTCCCCACCAGCTACGCAATAAGCTGCGATTGCTCTATAAGCGGCATCGAGAGGCCAAGGAGCACGGATTGGAGAATGTACGAATTTTGCCCCGCCACTTTGAGCTATACGATGACCTTGTTCAGGCGCCgcgagaaaacaaaaagagtgTCACTCCCAGGCCCATCCGCCACATTAAAACTGCCCTTAACAAGCcagcaagcaaacaaaacctTCTGCTGGATAGTGATAGCGAAAATTCCAGCTCTACCTGTGATCTTCTGCGAGCCGCTGCCGACAGCGAGGACTACGAGGATGCACTGGAGATGGAGGTGGAACCAACGCCTATTGAAGCACTCTCTGCCATTATCGAGGGCCAAAAGCAATTGCTGGCTCAGGTCAGAACCGCCAACGAAAGCTTTCTGCGGCAGCAACgcgaacagcagcaacaatttctGCTGCAAGTTTCCGATCTGATGCGCCGCGATCGAGAAGAGACCCTACGCAGGATCAACGAAATGCTGCCACCAAAATAA
Protein Sequence
MSKFAKFNGNDEDENEIEQKYAHILDLENPSVLDNSSGKAIRCKWTDEEVEFFLGIVHQMKLQSPLRKARNEKVFKVVSRAMGKRNCPKTPKQLKIKFQQLRRQYVRCRRSGGEPFEHFEAVHELLQGNGDSDLEAELESDSDGEADEDQSIQISETEGDDALDASSSSININARCKWTEGEVDLLLNLIHSLGLRTALLRKRNAKVFKLLAKEMAKRNCKKGADKLRIKFQLLRRMYNKVKNGTGETFEHFEAMRQVLDPTEEEAAAAEAEAEANLSSASDSEEDSEEEEGDASHKSGAHFWTDDEVDSFLLIIRANGFFQALDGSRKRNFQTLAHISNILDKQGIKRTPHQLRNKLRLLYKRHREAKEHGLENVRILPRHFELYDDLVQAPRENKKSVTPRPIRHIKTALNKPASKQNLLLDSDSENSSSTCDLLRAAADSEDYEDALEMEVEPTPIEALSAIIEGQKQLLAQVRTANESFLRQQREQQQQFLLQVSDLMRRDREETLRRINEMLPPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00578477;
90% Identity
-
80% Identity
-