Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_011057485.1
Location
WTSR01004727.1:661140-665500[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.6 7.8e+03 -3.0 0.1 5 17 25 36 23 42 0.55
2 3 1.6e-07 0.00017 21.5 0.0 4 38 305 342 302 343 0.86
3 3 6.9e-09 7.1e-06 25.9 0.3 3 43 405 450 403 452 0.81

Sequence Information

Coding Sequence
ATGCGACTGGACGCGGCCTGGACTCTGCTGgcctgcctgctgctgctcggcaGCGGCGGCGCCCACGCCTGGCACTCGGAGGAGCTGGAGATCTTCGACCTGGTCGAGGAGGTGAATCGCAACTTCTACGAGTTCATGGGCATCAATCAGACGGCCACGGGCGCCGAAATAAAGCGCGCCTTCCGCACCCTCTCCATCGTCCTGCATCCGGACAAGAATGCCGCCGAGGACGCGAACATCCAGTTCCGCAACCTGGTCTCCATCTACGAGGTCCTCAAGGATCCCTCGCGTCGCGAGAAGTACGACCGCGTGCTGAAGGAGGGCATGCCCAACTGGAAGTCCGCCCTCTACTACTACCGCCGCATGCGCAAGATTGGCCTGTACGAGGGCGCCTTCATCCTCTTCCTGATCACCACCGTGGGCCAGTACCTGTTCGCCTGGGCCGCCTACCTCGAGAAGAAGTACACCGCCGAGCAGGTGTTCGGCACCAANNTGNNGAAGCTGCAAAAGAAGAACAAGAACATCGACATGGACGTCATACTCAGCGAGATCCCGATGCCCTCGCTCCTCAACACACTGCCCATCCANATCCCAGNGGCGCTGTGGAACCTGCCGCGCACCATCAAGAACGGATTCAGCAAGGCCAACGAGCTCAAGGAACTGGCGCTGGAGAAGCGCAGGCAGGAACTGGAGGCTGCCCGTCGCCAGGAGGAACTGGAGCGGGAGGCCGAGGAGCAGGCACGTTTGCGAAAGGAGCACAAGGAGAACCTGCGCAAACGCAAGCAGAACAGCAAGGCGCCGGAGAAGAccgaggaggagctgcgcgGCTACTCGCAGATCCAGGCGCGTGAGATGACCGACGACGATGCAGTTCGTCCTGCTTCCCAGAAGAGCACTGTCAGCGGCGGCTTCTGGACGGACGAGGATCTCACCGAGCTGATTCGCCTGGTGAAGAAGTACCCGGGCGGAGCCGGCAGTCGGTGGAACACCATCGCCGAGTCGATGAACCGCAGCGTCCAGGAGGTGACTTTCATGGCGGCCAAGATGAAGGAGAATGGCTACCGCATTCCCGGTCAAACGGACAGTGTGGCCGAGAATCTCGTCCAGGAGTCGCAGCAGGCGCAGCGCAAGGAGAAGGTGAAGAAGGCGACGACTGCTGNGCCCGCCACTGCAGCGGGTCCCGCGGAGAAGAGCATGCTCATTCCGGAGACCAACTGGACGCAGGAGCAGCAACGTGCGCTGGAGGCGGCGATAGTCAAGTACCGGAAGACGGCCGGCGGCGATCGCTGGCAGAAGATCGCCAATAGTGTGCCGGAGAAGACCAAGGAGGAGTGCCTGGTGCGCTACAAGTATCTCTGCGAGCTGGTCAAGACGCAGAAGCGggccgaggaggaggccaaCGAGCCGGACGAGGATGCGGCTGCCATAGAGGAGGAGCTGCCCGAGGAGGAGCCNGNAGAACCGGAAGCGGTAGCGCAACCGGAAGCACCAGCCGCCANGAAGCTGAGCAAGCGGGANCAGCGGCGCCGCAAGCGAGATCTGTCCAGCGGCGAGGACTCGGACGATGCATATCAGTACGAGATCAGTTAG
Protein Sequence
MRLDAAWTLLACLLLLGSGGAHAWHSEELEIFDLVEEVNRNFYEFMGINQTATGAEIKRAFRTLSIVLHPDKNAAEDANIQFRNLVSIYEVLKDPSRREKYDRVLKEGMPNWKSALYYYRRMRKIGLYEGAFILFLITTVGQYLFAWAAYLEKKYTAEQVFGTXXXKLQKKNKNIDMDVILSEIPMPSLLNTLPIXIPXALWNLPRTIKNGFSKANELKELALEKRRQELEAARRQEELEREAEEQARLRKEHKENLRKRKQNSKAPEKTEEELRGYSQIQAREMTDDDAVRPASQKSTVSGGFWTDEDLTELIRLVKKYPGGAGSRWNTIAESMNRSVQEVTFMAAKMKENGYRIPGQTDSVAENLVQESQQAQRKEKVKKATTAXPATAAGPAEKSMLIPETNWTQEQQRALEAAIVKYRKTAGGDRWQKIANSVPEKTKEECLVRYKYLCELVKTQKRAEEEANEPDEDAAAIEEELPEEEPXEPEAVAQPEAPAAXKLSKRXQRRRKRDLSSGEDSDDAYQYEIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00616831;
90% Identity
iTF_00507545;
80% Identity
-