Dgun014548.1
Basic Information
- Insect
- Drosophila gunungcola
- Gene Symbol
- -
- Assembly
- GCA_011057485.1
- Location
- WTSR01005218.1:2126129-2127756[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.1e-16 1e-12 47.5 0.0 2 45 353 396 352 396 0.95 2 3 0.034 55 3.5 0.0 28 39 426 437 421 441 0.88 3 3 2.8e-20 4.6e-17 61.3 0.0 2 42 462 502 461 505 0.95
Sequence Information
- Coding Sequence
- ATGAATCACCTTAAGTGGATGGGGCACTCGTCCACGATAATGGACATACAGCGTTCGCTGCGCAACGACAATGGGAGCTGCGAGGTGATCCTGGCCTCGAGGGACGGCATTCGGGTGCGCGCCCATCTCTTCGTGCTCAGTACATGCAGCGAACTGATGCGCAACCTCCTGGTGGATGTGCCCCGTGGCCAGGAGGCCACCATCGTGCTGCCCGACATCCGTGGGGATCTGCTGGAGAGCATGCTGTCCTTCATCTACATGGGCGAGACCAGTTTGCCCTCCGCTTCGCTGTCCGAATTCCTGGAGGCCATTAATCTGCTCGGAATTAAGTCGGCCATCAGCTTCGAGTGCAATCCCTCGGCCAGTGCCGGCGCAGATGGGGAAACCAATCCGTTGGATGTGGTGTCAACCAAGTCCCTAACCGGCCTGCAAATCGCCGAGgcggacgaggacgaggaggaggagggagCCCANNCGGCGATGACAGTCGTGCCCAGCTCGGTCCTGGCGGAGAGCCAGCAGTCCAATCGCTCCCTGGAGTACCTGGATGTCTATGAGCCGCCAAAGATCACCTACTCCATTGAACACATGGACGGCAGTTCCAATGGCAATCAGTTTATCCTCACAGAAGAGAAGGGCACCTTTACCATAACACAGTCGACCGCGAGTTTGACCAAGTTGGAAGCCGATGAGACGATCGCCAGTGGTGCCGATGTGGAACTGGTCGACGACGATCCAGAGGCCGATATCACTGAGGATTCAGAAGAGCAAGAGACCCAGATGATCGATGATGAGTTTACGCCCACCGATCCACTTATCGAAGCCGCCACTGAAATGGACGAGGATGACGAGGATGTGCNNNACNNNNNNGACGACGACCAGGCTGAAGAGGAGGAATTGGAGCCAGAAAAGCCCCGCAAATTGGGCGGAGGGGGAGGAAAGCCGACTCCGCGCAATCGTCGCCCTGTTAATACAAAATCCGCCAAACGAGCTCCTGGAAAACCAACGAGACTGCAGCAATTTGTGGCTCTGAAGAGGGAGGTAAAAGATGATATCAACGATGCTTTGGATCTAGCAGCGGATGCAGTGATCCTCGAGGGATTGAGTCTGCAGAAGGCCGCCGATCGATTCGACATCTCCAAGACGGTCCTGTGGCGACGTGTGCGCAACAATCCCGCCTACATGCGAAACAACCGGGAACGACCTTCCCTCATAGAGGCCTATGAGCGCTTGAAAAACGGGGACTCACTGAAGAGCATCAGCACGGAACTGCAGATCCCCATGTCCACGCTGCACCGGCACAAGATGCGTCTGTCGGCCCAGGGACGCCTTCCCGACTTCGTGTCCTGCCGCCGGCGGGACACTACGCCCAAGGATGAGCTGCGCGACAAGTTGGCCAAGGCCGTGCATGCCTGCATGAACGAGGGCATGTCCCAGAACCATGCGGCAAATCTCTTCGAAATCCCCAAGAGCACGCTGTGGCGACACCTGCAGCGACGCATGTCCGAACNGAACCGAAAGGTCAAGAAGCAGCTGCAGGACGAGTACGAGGACGATGTGACAAACTAG
- Protein Sequence
- MNHLKWMGHSSTIMDIQRSLRNDNGSCEVILASRDGIRVRAHLFVLSTCSELMRNLLVDVPRGQEATIVLPDIRGDLLESMLSFIYMGETSLPSASLSEFLEAINLLGIKSAISFECNPSASAGADGETNPLDVVSTKSLTGLQIAEADEDEEEEGAXXAMTVVPSSVLAESQQSNRSLEYLDVYEPPKITYSIEHMDGSSNGNQFILTEEKGTFTITQSTASLTKLEADETIASGADVELVDDDPEADITEDSEEQETQMIDDEFTPTDPLIEAATEMDEDDEDVXXXXDDDQAEEEELEPEKPRKLGGGGGKPTPRNRRPVNTKSAKRAPGKPTRLQQFVALKREVKDDINDALDLAADAVILEGLSLQKAADRFDISKTVLWRRVRNNPAYMRNNRERPSLIEAYERLKNGDSLKSISTELQIPMSTLHRHKMRLSAQGRLPDFVSCRRRDTTPKDELRDKLAKAVHACMNEGMSQNHAANLFEIPKSTLWRHLQRRMSEXNRKVKKQLQDEYEDDVTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00605685;
- 90% Identity
- iTF_00515701;
- 80% Identity
- iTF_00515701;