Basic Information

Gene Symbol
kn
Assembly
GCA_011057485.1
Location
WTSR01005318.1:139687-153572[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.1e-91 4.2e-87 292.7 0.0 39 182 59 202 36 202 0.96

Sequence Information

Coding Sequence
ATGGAGTGGGGCCGGAAGCTGGGCTACCCCAGCGCCGTTTCCGGTCCGCGATCCGCCGGCAGCCTGATGTTCGGCCTGCCGCCCACCGCCGCCGTCGACATGAACCAGCCGCGTGGACCGATGACCTCGCTGAAGGAGGAGCCCCTGGGCAGCCGGTGGGCCATGCAGCCAGTCGTCGATCAGACCAATTTGGGCATCGGCCGCGCCCACTTCGAAAAGCAGCCGCCGAGTAATTTACGCAAGTCGAATTTCTTCCACTTTGTGATCGCCTTATACGATCGGGCTGGCCAGCCCATTGAGATCGAGCGGACGGCCTTCATCGGGTTCATTGAGAAGGACTCGGAGTCGGATGCCACCAAGACGAACAATGGCATCCAGTACCGGCTGCAATTACTCTATGCAAATGGAGCTCGCCAAGAGCAGGACATCTTCGTGCGCCTCATCGATTCGGTGACCAAGCAGGCCATCATTTATGAGGGTCAGGACAAGAATCCCGAAATGTGCCGAGTACTTCTAACGCACGAGGTGATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGGTAA
Protein Sequence
MEWGRKLGYPSAVSGPRSAGSLMFGLPPTAAVDMNQPRGPMTSLKEEPLGSRWAMQPVVDQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00581319;
90% Identity
iTF_00581319;
80% Identity
-