Basic Information

Gene Symbol
osa
Assembly
GCA_011057485.1
Location
WTSR01005050.1:2753633-2764168[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.1e-25 2.3e-21 75.8 0.0 2 89 512 599 511 599 0.92

Sequence Information

Coding Sequence
ATGGGCTCTGGTCCACCAGGCACTCCCAATCCGCAGCAGGTGATGCGACCCACACCCTCGCCCACCGGCTCCTCCGGTTCGCGTTCCATGTCCCCGGCAGTCGCCCAAAACCATCCAATCTCGCGTCCGGCGAGCAATCAGTCAAGCAGCGGCGGACCAATGCAACAGCCGCCGGTTGGGGCGGGAGGTCCACCGCCGATGCCACCGCATCCGGGAATGCCAGGAGGCCCGCcccagccgcagcagcaatctcagcagcaacaggcatCGAATTCGGCCTCGTCGGCGAGCAACTCGCCGCAGCAGACGCCGCCACCGGCACCGCCGCCCAACCAGGGCATCAACAacatggccacgcccccaccgcCTCCACAGGGGGCGGGCGGAGGGTACCCGATGCCGCCGCACATGCACGGCGGCTACAAGATGGGCGGTCCAGGCCAGGCACCCGGTGCCCAGGGATATCCGccgcagcagccacagcaatATCCACCAGGCAATTACCCGCCACGTCCACAGTATCCGCCTGGCGCATACGCCACCggaccaccaccgccacccacAAGCCAAGCGGGAGCAGGCGGAGCCAACAGCATGCCCTCGGGAGCCCAGGCCGGCGGCTATCCGGGTCGGGCCATGCCCAACCACACTGGCCAATATCCGCCGTATCAGTGGGTGCCGCCGTCGCTACAGCAAGCCGGACCCGGTGGAGCWCCCGGTGGCGCGATGGTCGGCAATCATGTGCAGGGCNAGGGCACANCGCCANCGCCGATTGTGGGTGGACCACCGCCACCGCAGGGCAGTGGGTCACCGCGACCTCTGAACNATCTGAAGCAGCATTTACAGCACAAGGGCGGCTACGGAGGAAGTCCAACGCCGCCGCAGGGGCCACAGGGATACGGCAACGGACCGACCGGAATGCATCCGGGCATGCCGATGGGGCCACCCCACCACATGGGACCTCCGCACGGACCCACCAACATGGGTCCGCCCACCAGCACACCGCCGCAGTCGCAGATGCTGCAGGGCGGACAGCCGCAGGGGCAGGGACNGGGACCCGTTGCGGGACCGGAAAGTGGAGGCCCGGAGCATATATCGCAGGACAATGGGATCAGCTCTTCGGGGCCGACGGGAGCCGCGGGCATGCATGCAGTCACCGCGGTGGTAACCACCGGACCGGATGGCGCGCCCATGGACGACGTCAGCCAGCAGAGCACGCTCTCGAATGCATCAGCGGCATCCGGCGAAGATCCACAATGCACCACACCAAAGTCGCGCAAGAATGATCCCTATAGCCAAAGTCACCTAGCACCGCCGAGTACGTCGCCCCATCCGGTCGTAATGCATCCAGGCGGCGGTGGCCCAGGCGAGGAGTACGACATGAGCTCGCCACCCAATTGGCCACGTCCGACTGGAAGCCCGCAGGTGTTTAACCATGTTCCGGTGCCGCAGGAGCCCTTCCGCAGCACCATCACCACGACCAAGAAGTCGGACTCACTGTGCAAGCTGTACGAGATGGACGATAATCCGGAGCGGCGCGGCTGGCTGGACAAGCTGCGGTCGTTCATGGAGGAACGGCGTACTCCGATCACAGCCTGCCCCACCATCTCAAAACAGCCACTCGATTTATATAggttatatatttatgtaaaagaACGTGGCGGATTCGTCGAGGTATGCAAGGTGACCAAAAGCAAGACCTGGAAGGACATTGCCGGACTGCTAGGCATTGGGGCGAGTAGCAGTGCGGCGTACACACTGCGGAAGCACTACACCAAGAACCTGCTGACCTTCGAGTGCCACTTTGACCGGGGTGACATCGATCCCCTGCCCATTATCCAGCAGGTGGAGGCGGGCAGCAAGAAAAAGACAGCCAAGGCTGCTTCGGTTCCTTCGCCAGGCTCGTCGAACTCGCAGGATTCGTTCCCGGCCCCGCCAGGCTCCGCCCCGAACGCGGCGATCGACGGCTACCCCGGCTATCCGGGCGGCAGTCCGTATCCGGGAGCCAGCGGNCCGCAGCCGGACTANNCGGCTGCGGGCCAGNTGCAGCGGCCGCCCTCTCAGAACAACCCGCAGACTCCTCATCCCGgcgccgccgccgctgttGCCGCCGGCGATAATATAAGCGTGAGCAATCCCTTCGAGGATCCCATTGCTGCCGGTGGCCCGGGCTCGAGCTCGGGAGCTGGGccaggaccaggaccaggTGGTGCTGGTCCCGGTGGTGCTggagctgttgctgctgtgggcGGCGGTGGCCCACAACCACATCCACCGCCCCCACATTCACCGGCGGCCagtcaacagcagcagcagcatccacAGCACCCNNNNNNNNNCGGTCTGTCCGGGCCACCAccgccacagcagcaacagcagcagccgggGCAGCAGCCACCACTACCACTACCAGCCGTGGGCGGTgggccaccaccagcaccacagCAACATGGGCCTGGTCAGGTGCAGGTGCCGCCGTCGCCTCAGCAGCATGTGCGCCCAGCCGCCGGAGCACCTTATCCGCCGGGTGGCTCCGGCTACCCAACGCCTGTGTCTAGAACGCCAGGCTCACCCTATCCATCACAGCCCGGTGCTTACGGACAGTACGGCTCGAGCGATCAGTACAACGCCACAGGGCCGCCCGGCCAGCCATTCGGACAGGGTCCAGGACAATATCCGCCCCAGAACCGCAACATGTACCCTCCCTACGGGCCGGAGGGGGAAGCTCCTCCAACTGGTGCCAATCAGTACGGTCCCTATGGCAACCGACCATACAGTCAGCCACCGACGGGCGGACCTCAGCCGCCGGCGCAGACGGTTGCGGGTGGACCGCCGGCCAGCGGAGCTCCAGGAGCACCGCCCAGCAGCGCCTATCCGTCGGGCAGGCCCACCCAGCAGGACTATTACCAACCACCACCAGATCAAAGTCCACAGCCACGTCGGCATCCCGATTTCATCAAAGACTCACAGCCCTATCCAGGATACAATGCTAGGCCTCAAATTTATGGCGGTACCCAGCAGTATCGGCCACAATATCCAACCTCGCCTGCCCCGCAAAGCTGGGGAAGTGCTCCGCCTCGCGGTGCAGCACCTCCGCCAGGCGCACCACACGGCCCGCCACTGCAGCAGCCGCCCGGAGTGGGCCAGTGGGATCAGCACCGCTATCCGCCACAGCAGggtccgccgccgcctcctNNNNNNcagcagcagccacagcagcagcagcagcaaccgccGTACCAGCAGGTGGCCGGGCCCCCTGGACAACAGCCGCCTCAGGCGCCGCCACAGTGGGCACAGATGAACGCCGGCCAGGCGGCGCAGCCAGGAATAGCGCCACCAGGCTCGCCACTGCGTCCGCCGTCCGGACCAGGACAACAGCAGAGGATGCCCGGAatgccgccgcagcagcaacagtcaCAGCAACAGGGCGGAGTCCAGCAACCACCGCCGCAACAGGCTACTCATGGTGGCGTTCCCTCGCCGGGACCGGGTGGAATGGTAAAGCCACCGTACGCCATGCCCCCGCCACCATCTCAGGGTGTGGGTCAGCAAGTGGGCCAAGTGCCACCCAGCGGCATGATGGTTCAGAAACAGCCGCCGATGCCGGGCCAGGTAATGCAGCAACAgcccctgcagcagcagcctccgCCGCATCAACATCCGCATCCTCACCAGCATCCGCAGCACCCGCCGCACCCGCATCCGCATCAGATGCCGCCCAGTCAGACGGCACCGGGCGGTGGCTACGGCCCGCCAGGAATGCCTGGTGGCGGTGGCCAGCTGGTGAAGAAGGAGCTGATTTTTCCGCACGACAGCGTGGAGTCCACCACACCGGTGCTGTACCGAAGGAAGCGGCTCACCAAGGCCGATGTGTGCCCCGTGGATCCGTGGCGGATATTTATGGCCATGCGATCCGGTCTGCTGACCGAATGCACCTGGGCGCTGGATGTGCTAAACGTGCTATTGTTCGACGATTCTACGGTGCAGTTCTTTGGCATTTCGAATCTGCCTGGCCTGCTGACTCTTCTGCTAGAGCACTTCCAGAAGAATCTCGCCGAGATGTTTGACGAACGGGAGAACGAGGAGCAAACCTCGATGCTGGCGGAGGAAGGGGCAGATGACGACGCCGACAGCGGCACTGTGATGTGCGAGAAGTTGCGGACCAGCGGACGACAGTCGCGATGTGTGCGCAGCATCAGCAGCTACAACCGCAGGCGGCACTATGAGAACATGGACCGCAGCGGAAAGGGCGTCGCCAGCAACGGCAGCGATTCGGAAGATGCCGACGAGGGAATTGATCTGGGCCAGGTGCGTGTGCAACCCAATCCCGAGGAGCGCTCGCTACTGCTCTCCTTCACGCCCAATTACACGATGGTCACGAGAAAGGGAGTGCCAGTGCGCATCCAGGCCGCCGATCACGACATCTTTGTGGACGAGCGCCAGAAGGCGTGGGACATAGACACGAACCGCCTGTACGAACAGCTGGAGCCCGTGGGCAGCGATGCCTGGACGTACGGATTCACCGAGCCAGATCCCCTCGACGGCATCATAGACGTCTTCAAATCGGAGATTGTTAACATTCCATTTGCACGTTTCGTCCGCTCCGAAAAGAAGGGAAAAACGCGAACAGAAGTGGCGAGTACGGCCAGGAAGGCGGAGATAAAGCTGGAGGAGAACAGCTCGGAGGNNNCGGCTTTCAACAAGAAGAGGCGACTGgtcagcggcggcagcagcagcagtggagCCCCAGCCGANNGCAAGAAGTCGAAGCTGACGAGTGAGGAATTTGCCCAGCCAAACGTTGATGTGAAGAAGGAGCCAGGCTCGGCGGACAGCGATTGTCGCCCCGTCGACATGGATATCGAAGCACCCCAGCAAAGGTTGACCAATGGCGTTGCAGCCTGCCCAGCCTCAACTCCCGCCGTCTTCGATCCCCGGACAACGGCCAAAGATGTGGCGCAGGTGCTGCAGCGGAGGCGTGACTCAAGCTTTGAGGACGAGTGCTACACCAGGGACGAGGCGTCTCTGCACCTGGTCAACGAGAGCCAAGACTCGTTGGCGCGGCGCTGCATCGCCCTTTCCAACATCTTCCGCAACCTGACCTTCGTGCCCGGCAACGAGACGGTGCTGGCCAAATCCACCAGGTTCTTGGCGGTGCTGGGGCGACTGCTTCTGCTGAACCACGAGCACCTGAGGCGCACCCCGAAGACACGTAACTACGACCGTGAGGAGGACACGGACTTCAGTGACTCGTGCAGTTCGCTGCAAGGAGAGCGCGAGTGGTGGTGGGACTACCTAATCACCATTCGGGAGAACATGCTGGTCGCCATGGCCAACATAGCCGGGCACTTGGAGCTCTCGCGCTACGATGAGCTCATTGCCCGCCCCCTGATCGACGGACTGCTGCACTGGGCCGTGTGTCCCAGTGCCCATGGCCAGGATCCGTTCCCGTCGTGYGGACCCAATACGGCGCNCTCGCCGCAGCGCCTGGCACTTGAGGCGCTCTGYAAGCTGTGCGTGACGGATGCTAACGTCGACCTGGTCATTGCCACTCCACCGTTCTCGCGACTGGAAAAGCTCTGCGCCGTGCTCACCCGGCATTTGTGCCGCAACGAGGACCAGGTGCTTCGCGAGTTCTCCGTGAACCTRCTGCACTACTTGGCCGCCGCCGATAGCGCCATGGCTCGCACTGTGGCGCTGCAGTCCCCGTGCATCTCCTACCTGGTGGCCTTCATCGAACAGGCCGAACAGACGGCGCTGGGTGTGGCGAACCAGCATGGGATCAACTACCTGCGCGAGAATCCCGACTCGATGGGCACCAGCCTGGACATGCTGCGGCGAGCAGCCGGAACGCTGCTCCATCTCGCCAAGCACCCAGACAACCGGTCGCTGTTCATGCAACAGGAGCAGCGGCTGCTCGGCCTGGTCATGTCGCACATTCTGGACCAGCAGGTGGCTCTTATAATTTCGCGGGTGCTTTACCAAGTGTCGCGCGGAACGGGGCCCATACACTCGGTGGATGTGTCCGCCGGAGCGGCGGTGGCACAACCAGCGGCGGCACCGCCGCCAACCAATGCAGGAACAACGACAGCCGTTGCGTAG
Protein Sequence
MGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGGPMQQPPVGAGGPPPMPPHPGMPGGPPQPQQQSQQQQASNSASSASNSPQQTPPPAPPPNQGINNMATPPPPPQGAGGGYPMPPHMHGGYKMGGPGQAPGAQGYPPQQPQQYPPGNYPPRPQYPPGAYATGPPPPPTSQAGAGGANSMPSGAQAGGYPGRAMPNHTGQYPPYQWVPPSLQQAGPGGAPGGAMVGNHVQGXGTXPXPIVGGPPPPQGSGSPRPLNXLKQHLQHKGGYGGSPTPPQGPQGYGNGPTGMHPGMPMGPPHHMGPPHGPTNMGPPTSTPPQSQMLQGGQPQGQGXGPVAGPESGGPEHISQDNGISSSGPTGAAGMHAVTAVVTTGPDGAPMDDVSQQSTLSNASAASGEDPQCTTPKSRKNDPYSQSHLAPPSTSPHPVVMHPGGGGPGEEYDMSSPPNWPRPTGSPQVFNHVPVPQEPFRSTITTTKKSDSLCKLYEMDDNPERRGWLDKLRSFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLTFECHFDRGDIDPLPIIQQVEAGSKKKTAKAASVPSPGSSNSQDSFPAPPGSAPNAAIDGYPGYPGGSPYPGASGPQPDXXAAGQXQRPPSQNNPQTPHPGAAAAVAAGDNISVSNPFEDPIAAGGPGSSSGAGPGPGPGGAGPGGAGAVAAVGGGGPQPHPPPPHSPAASQQQQQHPQHPXXXGLSGPPPPQQQQQQPGQQPPLPLPAVGGGPPPAPQQHGPGQVQVPPSPQQHVRPAAGAPYPPGGSGYPTPVSRTPGSPYPSQPGAYGQYGSSDQYNATGPPGQPFGQGPGQYPPQNRNMYPPYGPEGEAPPTGANQYGPYGNRPYSQPPTGGPQPPAQTVAGGPPASGAPGAPPSSAYPSGRPTQQDYYQPPPDQSPQPRRHPDFIKDSQPYPGYNARPQIYGGTQQYRPQYPTSPAPQSWGSAPPRGAAPPPGAPHGPPLQQPPGVGQWDQHRYPPQQGPPPPPXXQQQPQQQQQQPPYQQVAGPPGQQPPQAPPQWAQMNAGQAAQPGIAPPGSPLRPPSGPGQQQRMPGMPPQQQQSQQQGGVQQPPPQQATHGGVPSPGPGGMVKPPYAMPPPPSQGVGQQVGQVPPSGMMVQKQPPMPGQVMQQQPLQQQPPPHQHPHPHQHPQHPPHPHPHQMPPSQTAPGGGYGPPGMPGGGGQLVKKELIFPHDSVESTTPVLYRRKRLTKADVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFDDSTVQFFGISNLPGLLTLLLEHFQKNLAEMFDERENEEQTSMLAEEGADDDADSGTVMCEKLRTSGRQSRCVRSISSYNRRRHYENMDRSGKGVASNGSDSEDADEGIDLGQVRVQPNPEERSLLLSFTPNYTMVTRKGVPVRIQAADHDIFVDERQKAWDIDTNRLYEQLEPVGSDAWTYGFTEPDPLDGIIDVFKSEIVNIPFARFVRSEKKGKTRTEVASTARKAEIKLEENSSEXXAFNKKRRLVSGGSSSSGAPAXXKKSKLTSEEFAQPNVDVKKEPGSADSDCRPVDMDIEAPQQRLTNGVAACPASTPAVFDPRTTAKDVAQVLQRRRDSSFEDECYTRDEASLHLVNESQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHEHLRRTPKTRNYDREEDTDFSDSCSSLQGEREWWWDYLITIRENMLVAMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPFPSCGPNTAXSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQVSRGTGPIHSVDVSAGAAVAQPAAAPPPTNAGTTTAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2