Basic Information

Gene Symbol
-
Assembly
GCA_900245975.1
Location
NW:420978-423766[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.3e-07 0.00012 21.6 0.0 1 38 235 273 235 276 0.96
2 4 5.4e-08 5e-05 22.9 0.0 2 42 291 335 290 339 0.85
3 4 4.5e-05 0.041 13.5 0.0 3 46 347 391 345 391 0.89
4 4 1.4e-09 1.3e-06 28.0 0.0 2 43 398 440 397 443 0.95

Sequence Information

Coding Sequence
ATGGATGTCGAGAACCTCTCAAATCTAAAccccaatcaacttttagcaGAAATCACACCGTTGCTGGAAGCCACCTCAGACCCAAGCGAGTCTAATGCCCTGGTGCTCAACCATGAGCTGCAACGACGACTGCACCAAGTGCGGGCTAAGGTTTTGGCACTGTTGAATTCTGTGCGGGCTCGATATGCACTGAACGAGGAGATTCTAATACGCCGCCTAAAGCCTCGAACTCACTCTCTTAGCAGGCCTACTAAGGGAAGTACTGAAACCTATGGAATATGTGGAGCAATCCGCCGTGGAGCCACCTTCCACTTCAAGGGAAATTTGTATTTCCGCGATATTGATGGCCGCAGCTGTCCGAATAATGGGGACTACGATGTGCGTAGTTACACGGAGATGTTTCCTGCGGACTTTGATATGCGCTCCAAACATGTGTGGACAGTTCTGGACAAGAAGAACCTGATAATGGGCATCAAGCAACAGCTGCTGGACCATGAGGCCTGTGAAAAGCCCACCAACAAAAACGCTCTGAAGCGAAGGCCCATTGAGCGGCATGTTCGCTCGCTGGCCAGTCTGCTGGTCAACGCCGACAGCAGCTTTAGCATCGACTGGAACCAGATCAGTACTCTGGACCTGGAGTTCCGTCATTCCAACTACAGCTGTGAGGCAATGTGGCGGGTTTATCTACATCCGAAGCTGAGCCGTGAGGACTGGAGTGCTTCGGAGGACGCAGCTCTGGTGGCGGCGGCCAAAGCGAATCTCATGCAGAACTGGGGGAAGGTAGCTTCCGCGTTGGGTCGCCGATCGGACTACCAGTGTTTCGTGCGTGTTCAGATAGCGTTCCGTCAGCACCTAGAGCCATCCTCTAGTGTACGATGGACCGAGAAGGACAGCGAGACACTAAAGCGTCTCGTCGAAAAGAATACTGTTAATGGCCAGGTCAATTGGCAGCTGGTGTCGGAACACTTCCCTGGCAGGTCCAAGTCCACTCTAATCGGACGCTATACGTACGCCCTGCATCCAAGCATCAGCCATGcaCCCTTCAGCACCACCGAGGACATTATGCTGTTTGCCGCCGTGGAGGAGTACAATGGTAAGTTCCCCAGCTTTCCACGCACACTGTTTCCCAACCGTTCGCTGGCGCAACTCCGTACCCGATACCACAATGTCCTTGCCCAACGCACCAAGACCGACCCGTGGTCGGTGGTGGACGACACCAAACTGATGAATTTTGTCACGGAGCACGGGGCTGCCCAGTGGGTGAACTGTGCGACGCATCTTGGGAATCACACGCGGACCAGTTGCAGGACGCGCTTTTTGGTAATAAAACGCTTCCTAGAGCAGAATCCCTTGGCAACGGTCGAGGACTGTCCTCGGCGAAGgtgttttaaaaataatatcgTCACGGCTGAGAATTGGGCGGAGTGTCTGGAAGTGTGGCAGCAGGATCCGGAGTCCATCGATCCATCGAAGCCCAAAACTCGTCCACCGAGACCAGCAGCGAGAAGGATATCCAACATAAAGGGCGAGGCCAGCGAAAGCAACGGCCATGTGGCATACCCAAAAGAAATAGATCTGCAGGTCTATGAGTACTTCAAGTATAGCTACGATCTCCAACTAAAGACATCACCGTCGTCGAAGCTCTTTTCGATGCCCAACGATGGCTCGAATCTCGCCTACGTGGTCAAGGTCTTAAACTATCAGCCACCAGCGGCAAAGAGCTTGAAGCCCATTCAGAGCGTTTCAATGCCTCTGCAATTGAGTatgttttacaaccaaatgcTGAAGACTTGGCCAAATAAAAGGGACAAGCAGGCATCCCATGGCGCGCTACTCCTGCCGCCCAACTTTTCAACAATGATGGGATTCCGTGCTATTTGCATTGTATCGGGCGACAGTCGAAAGATCCCATCCGACGAGCCGCCATCCTATGATGAGTCCTCGCAGCACATCCAGCAGTTCCGGAAACGTTTGCGAGCCCTCTTTTATCGCACCACTCTGCTGAGCCGACTTGAAACACATCTCTTCGATGACTTGCCCTCCCACCTGGTGTCCTTGCCACGACCTCTGGCAATCTACATAGAATCCGGGGCAAGGCCGACGCAGGAGGAACCTGCAGCCCCGCAAATGTCCCATGTCAACCGAGGGGTTGAGCCAAACCGCAAGAAACCCAAATTGGAGCCACTAAGCGAGGATGAGTTAATGAGcttcaaggaggaggaggagttccTGTCTTTATAA
Protein Sequence
MDVENLSNLNPNQLLAEITPLLEATSDPSESNALVLNHELQRRLHQVRAKVLALLNSVRARYALNEEILIRRLKPRTHSLSRPTKGSTETYGICGAIRRGATFHFKGNLYFRDIDGRSCPNNGDYDVRSYTEMFPADFDMRSKHVWTVLDKKNLIMGIKQQLLDHEACEKPTNKNALKRRPIERHVRSLASLLVNADSSFSIDWNQISTLDLEFRHSNYSCEAMWRVYLHPKLSREDWSASEDAALVAAAKANLMQNWGKVASALGRRSDYQCFVRVQIAFRQHLEPSSSVRWTEKDSETLKRLVEKNTVNGQVNWQLVSEHFPGRSKSTLIGRYTYALHPSISHAPFSTTEDIMLFAAVEEYNGKFPSFPRTLFPNRSLAQLRTRYHNVLAQRTKTDPWSVVDDTKLMNFVTEHGAAQWVNCATHLGNHTRTSCRTRFLVIKRFLEQNPLATVEDCPRRRCFKNNIVTAENWAECLEVWQQDPESIDPSKPKTRPPRPAARRISNIKGEASESNGHVAYPKEIDLQVYEYFKYSYDLQLKTSPSSKLFSMPNDGSNLAYVVKVLNYQPPAAKSLKPIQSVSMPLQLSMFYNQMLKTWPNKRDKQASHGALLLPPNFSTMMGFRAICIVSGDSRKIPSDEPPSYDESSQHIQQFRKRLRALFYRTTLLSRLETHLFDDLPSHLVSLPRPLAIYIESGARPTQEEPAAPQMSHVNRGVEPNRKKPKLEPLSEDELMSFKEEEEFLSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00474432;
90% Identity
iTF_00600983;
80% Identity
-