Basic Information

Gene Symbol
Kdm5
Assembly
GCA_900245975.1
Location
NW:4172605-4183178[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-26 2.7e-23 81.7 0.1 2 89 222 305 221 305 0.95

Sequence Information

Coding Sequence
ATGTCCGCCAAAACCGAGGCGGACAATACCACGGCTGCCAGCTCCGGCGGtggcaacagtagcagcagtggcggcgggGGATCGGGAAACACATCCTCCTCGAACGGAACCGCCACACCGGCTCGTCGTCTTCGCACACGCAACTCGACGGGAAATGGTCCGGCAAGCGGCAGTGAATCCGGCAAGAAATCGAATCCAAACGATGAACCCTCaacaccagctgctgcttcggccGCCAGTGGCCATGGCCCCTCGCCGGCTGCGTCAACGGAACGTCCAATGCCAAGCGTTCCCATGAAccatgccagcagcagtgtgTCGGCGAGCAGGAAGTACCACAACAGCTGTCCCCATCCCACGCCTACAGTGCACAAGAAGACGGTGCACACGCAGCCGCACAGCAGCAATAAGTTTGATCAGGGCAAGAATGAGGAGTTTCACTTTGACACGCCGCCCGAGTGCCCCGTGTTTCGGCCCACTATAGAGGAATTCAAGAATCCGCTGGCCTACATCAGCAAGATTCGATCGGTGGCCGAGAAGCATGGCATTGCCAAGATCCAGCCGCCGGCGACATGGTCGCCATCGTTTGCCGTGGATGTGGACAAGCTGCGTTTTGTGCCGCGTGTTCAGCGGCTCAACGAGCTGGAGGCTAAGACCAGGGTGAAGCTCAATTTCCTGGATCAAATCGCCAAGTTTTGGGAGTTGCAAGGCTCCTCCCTCAAGATCCCGATGGTGGAGCGCAAGGCCCTCGATCTGTACACCCTCCATCGCATTGTGCACGAGGAGGGCGGCATGGAGCAGACCACCAAGGACCGCAAGTGGGCGAAGGTGGCCAATCGTATGCAGTATCCATCCAGCAAGAGTGTTGGCGCTACCCTGAAGAGCCACTACGAGCGCATTCTCCATCCCTTCGAGGTGTACACCTCGGGCAAGGTTCTgggtccagctgcagcagctgccgcagccacagccagcggcaCGCCCACGCCAGTAAAGCTCGAAGATGTGGGCACCGAGTACAAGGCCCACGAGATAGCCACACGTCAGCAGATCGCACCGCCCAATGAGACGAACACACGTCGCTCCAAGCGCTTTGGCAACTCGACTGCCAGCTGCGGCCTGGCAGGCGGCGCATCCTGTGGCAAGGATGGGTCTGTGGGTGGTGTGGTCATCAAAACGGAGACAAAGGAGGACTTCAAGCGCGATCTTCTGAGCAGCTTCAATGCTGTGCAAGGCGGTGGCATGCCTGCTGGCGGCACACCTGCTGGCCGCGGCGGGCCCaacaagaccaagaccaacaACGAACCGACGCCAGCTGTTCCGCCATTAATTGATCCACTGATGAAGTACATTTGCCACATCTGCAATCGCGGCGATGTTGAAGAATCGATGCTGCTGTGCGATGGCTGCGACGACAGCTACCACACGTTCTGTCTGCTGCCGCCCTTGACCAGCATACCCAAAGGTGAATGGCTTTGTCCGCGCTGCGTTGTTGAGGAGGTGAGTAAGCCCCAGGAGGCGTTTGGCTTTGAGCAGGCCGAAAGGGAGTACACACTGCAGCAGTTTGGCCAGATGGCGGATCAATTTAAACAGGAATATTTCCGCAAGCCCGTGCATTTGGTGCCCACCGAGTCGGTGGAGCGTGAATTCTGGCGCATTGTCTCATCGATCGATGAGGATGTGACCGTCGAGTATGGCGCCGATTTGCATACAATGGACCATGGTTCGGGCTTCCCCACCAAGAGCTCGCTGTATCTGCTGCCGGGCGATCAGGAGTATGCCGAGTCCAGCTGGAATCTGAACAatctgccgctgctcgagGACTCCATTTTGGGGCACATCAATGCGGATATTAGCGGCATGAATGCCCCCTGGATGTATGTGGGCATGTGCTTTGCCGCCTTCTGCTGGCACAACGAGGACCACTGGAGTTATTCCATCAACTATTTGCACTGGGGCGAACCGAAGACCTGGTACGGCGTGCCCGGCTCGTGTGCCGAACAATTTGAGGAGACCATGAAGCGTGCCGCACCCGAGCTGTTCTCGTCGCAGCCCGATCTGCTGCATCAGCTGGTGACTATTATGAACCCAAATATATTGATGAACAATCGGGTGCCTGTGTTTCGCACCGATCAGCATGCCGGCGAGTTTGTCATCACCTTTCCGCGTGCCTATCATGCTGGCTTCAATCAGGGCTATAACTTTGCCGAGGCCGTCAACTTTGCGCCCGCCGATTGGCTGAAGATGGGCCGTGAGTGCGTCAATCATTATTCCATGCTGCGTCGCTTTTGCGTCTTCTCCCACGACGAGCTGGTGTGCAAAATGGCCTTGGAGCCGGCCAAGCTGACGTTCGGCATAGCCACCGCCTGTTACATCGACATGGCCGAAATGGTGGACACTGAAAAGAAGCTGCGCAAATCCCTACTGGAGTGGGGTGTTACCCGAGCGGAGCGCCGCGCCTTTGAGTTGGTAAACGATGATGAGCGGCACTGTCAGGAGTGCAACACCACGTGTTTCCTTTCGGCAGTGGCCTGCGAGTGCAACGACAAGCTGATTGTCTGTCTGAGGCATTATACCGtcctctgtggctgtgccccAGAGAAGCATACGCTCATCTATCGCTACACGCTTGATGAGATGCCCCTGATGTTGCAGAAACTAAAGGTCAAGGCGCACAGCTTTGAGCGCTGGCTCTCACGCTGCCGGGACATTGTGGATGCCCAAACACCCACCTCGGTGACACTCAccgagctgcaggagctgtgCAAAGAGGCGGAGACCAAGAAGTTTCCCTCATCGTTGCTGATTGATCGCCTCAATGCAGCGGCCATCGAAGCGGAGAAGTGCGTCACAGTCATCCAGCAATTGGGCATCAATAAGGTACGCACTCGTTCGGATCACAATCAGGAGGCGGCCCAATACAAGCTGACAATGGAGGAGCTCGAGCTGTTTGTCCAGGAAATTGATAATCTTTGCTGCATCATCGATGAGGGCACCTCGGTGCGGGAGCTGCTCGTTTtgggcaaacaatttgtggaCCGTGCGgaggcgcagctgcagctaaCGTTGGAGGCACTCGAGGAGAACGAACTGGAGACGCTGATCAGTGAGGGCAGCTCGCTGCGGATTGAATTGCAGCAGCTGGATCTATTACAGAAGCGTCTGAAGCAGTGCAAGTGGTACAAACGCTCGCAGGGCTTGAGGGAGACCAGCTCGAAGCTGACGTATCAGGATGTGAAGAACCTGCTGCATATGGCAGCGGCAGACTTGGATCCCACAGACCCATACGTGGACAAGGAGATGCGCAAGCTGCAGCAAATAGGCGCCGACATAGAGTCGTGGGAATCGCAGGCGGCCAAGTATTTCCGCCGCTTAACGCAACAGCACGAACTGGCGGAGATTGAGCAGTTCTTAAAGTCGGCGAGCGAGATAAGCGGACAGGTGCCATCGCACAGTCTGCTCAAGGATGCGTTGCGCAAGGCGCGGGAGTGGCTGCGAGccgtggagcagctgcagcagaacaaTCATGTCACCTACTGTCACACGCTCGAGAATATGATAGAGCGTGGGCTGAATATACCCATCCAGTTGGAGGAGCTCAGCCGAATGCAGGGGCACTTGTATAGCGCCAATCAGTGGAAGGATAATACGGCGAACGCCTTCCTCAAGAAGGGCACGTTCTATACGCTGCTCGAGGTGCTGATGCCACGGGCGGATGCCATCAACATTGACTCGGATCTCAAGCCGCGCTTCCAGGATGACTTTCTGAAGGAGAAGAATCCGGCGGAGATTGTCGATAGTTTCAAGCACgccgaggagcaggagctgctcgaCATGCGCGACCTCAGGCGCCAGAACATGACCAAGAACCCACTGCGGGACATGTTCTGTCTGTGCAAGGCTGAGTTCCGTGGCCTCATGTACAATTGTCAGTTGTGCCGCGATTGGTTCCACGAGGACTgtgtgccaccaccaccgtcGGCATCGAGTCAGAATGGTTTGCTgaatggaggaggagcaggaatcGGAGGCGGTATGGTGCCGCCCACGAATCGGCCCAAGTGGCTGTGCCCCAGCTGTGTGCGCTCGAAGCGGCCGCGCCTGGAGACGATCCTTCCACTGctcgtccagctgcagcagctgcccatCCGTCTGCCCGAGGATGAGGCATTGCGTTGTTTGGCGGAGCGTGCCATGAACTGGCAGGACAGGGCCCGCAAGGCGCTCACCAGCCCGGATGTGAGTGCGGCCCAGGAGGCGATTCTCgctcagcagcagaagcgtcGCTCGGAGGGCGGTGGCATCGGTAGTGGCGGTGGTGTTGTGGGCAACATCAACAGTCCCCGCAAACCCCGGCGTCGTGGCAGCATGGCCAAGGAGGCCAGCGGCTCCACAGAGTCGGatgtcgatgatgatgatgacgatgacgagtGCCGCCTACGGATCGTCGAGGATGGCTTCAGTAACGACGAGGATGAGCTGCCCCGCCCCGCAACGAACACCGAATCAAATTCCGATCTCCTCAAGCTGCTGTCCGATAGCGAAATTGAGAATCTACTAGATCTAATGATGGAGGGGGATCTCCTTGAGGTCTCACTTGACGAGACGCTCGAGCTGTGGCGCATCCTGGAGACAATGCCGCCGACAATGCTCCAAGCGGAGGCCAATAACCGTGTGGCCCAGCATTTGCAGCGTCAGCGACAGCAGCCGACATCTCTGCCGCCCGCATCCTCCAGCATTCACTCCGGCGCCGAGGACTCCAACGACAGCCTCCTCGTACAGAACAGTcccaatagcaacagcaacaacagcagcagcacgccgGCCACGAATACACCCAACAATGGGCGCAACAAGAAGCGGCGCTCGAACGATGCCAGCGGCGGCAATGCGGCTGTTCCACGCAAGAAACAGAACACGCCCAAGCAGACGCCCAGCAAGAAGAAcgctggcggtggtggcgcgGCTGCCAATCGGAAGAGTGAGATCAAAACGAcggtagcagcagctgcggcggcagcagcagcagcaacgacaccTGGAGCAGATGCCGATGCAGAGAATAAGCAGGCGAATGGCGGCAATACCAACTCAAATATATCCCAGGCTGCAGCATCGGGGGCGGCGGGAGTGGGTAGCGGCTCGAACACACCCACGCCAACGGCCACGCCTGGTTCGGCGCATAAGAAACGTAAGCGCACTTCCACCAACAAtaatagcagcaacagcaacaacaacaataatagcagcaacagcagcaacaccaacaacaacaccaatagtaacagtaacaacaacaacaacagtccgAGCACTCCTAGTGGAAcgcaggcagcagcgacaccgacagcagcagcagcaccaccaacgggtggcggcggcggtggcggtcaGAAGAAGCACGCCCAGCGCAATCAACAGGCAGCCCAGGAGGATGACGAGGAGGAGTGCAGGGCGGAGAACTGCCATAAGCCGACGGGGCGCGAAGTGGACTGGGTGCAGTGCGATGGCGGCTGCAACGAGTGGTTTCACATGTACTGTGTGGGTCTCAATCGCAGCCAGATCAAGGCCGATGACGATTACATTTGTATACGCTGCACGAAGACCGTCACCGTGGCGGTAagcagtagtagtagtagtagtaatcatggcatggcatcgacaacgacaacgatggcGACGCCGGGAAAGCAGCGGGCAGTGCAATCGGCGCGATAg
Protein Sequence
MSAKTEADNTTAASSGGGNSSSSGGGGSGNTSSSNGTATPARRLRTRNSTGNGPASGSESGKKSNPNDEPSTPAAASAASGHGPSPAASTERPMPSVPMNHASSSVSASRKYHNSCPHPTPTVHKKTVHTQPHSSNKFDQGKNEEFHFDTPPECPVFRPTIEEFKNPLAYISKIRSVAEKHGIAKIQPPATWSPSFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVHEEGGMEQTTKDRKWAKVANRMQYPSSKSVGATLKSHYERILHPFEVYTSGKVLGPAAAAAAATASGTPTPVKLEDVGTEYKAHEIATRQQIAPPNETNTRRSKRFGNSTASCGLAGGASCGKDGSVGGVVIKTETKEDFKRDLLSSFNAVQGGGMPAGGTPAGRGGPNKTKTNNEPTPAVPPLIDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTESVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKRAAPELFSSQPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAQTPTSVTLTELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGTSVRELLVLGKQFVDRAEAQLQLTLEALEENELETLISEGSSLRIELQQLDLLQKRLKQCKWYKRSQGLRETSSKLTYQDVKNLLHMAAADLDPTDPYVDKEMRKLQQIGADIESWESQAAKYFRRLTQQHELAEIEQFLKSASEISGQVPSHSLLKDALRKAREWLRAVEQLQQNNHVTYCHTLENMIERGLNIPIQLEELSRMQGHLYSANQWKDNTANAFLKKGTFYTLLEVLMPRADAINIDSDLKPRFQDDFLKEKNPAEIVDSFKHAEEQELLDMRDLRRQNMTKNPLRDMFCLCKAEFRGLMYNCQLCRDWFHEDCVPPPPSASSQNGLLNGGGAGIGGGMVPPTNRPKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALTSPDVSAAQEAILAQQQKRRSEGGGIGSGGGVVGNINSPRKPRRRGSMAKEASGSTESDVDDDDDDDECRLRIVEDGFSNDEDELPRPATNTESNSDLLKLLSDSEIENLLDLMMEGDLLEVSLDETLELWRILETMPPTMLQAEANNRVAQHLQRQRQQPTSLPPASSSIHSGAEDSNDSLLVQNSPNSNSNNSSSTPATNTPNNGRNKKRRSNDASGGNAAVPRKKQNTPKQTPSKKNAGGGGAAANRKSEIKTTVAAAAAAAAAATTPGADADAENKQANGGNTNSNISQAAASGAAGVGSGSNTPTPTATPGSAHKKRKRTSTNNNSSNSNNNNNSSNSSNTNNNTNSNSNNNNNSPSTPSGTQAAATPTAAAAPPTGGGGGGGQKKHAQRNQQAAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCTKTVTVAVSSSSSSSNHGMASTTTTMATPGKQRAVQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00603133;
90% Identity
iTF_00535838;
80% Identity
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