Basic Information

Gene Symbol
Ubp1
Assembly
GCA_900245975.1
Location
NW:8122573-8130236[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.1e-54 5.9e-50 169.2 1.7 22 189 398 562 371 570 0.88
2 2 1.7e-13 1.1e-09 37.4 1.2 186 222 613 649 609 650 0.92

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTATCGCAAAACTCCGGTCTCTTGGATTTACAAAGCATATTCGATCCACAATATTCAGAACTGCAACAAGAACATTCGAACCACCatcaacacaacaacaacaacaacaacaacaacaaccctcACCATCAGCCACACGAGGAGCTACAACTTCAGCTACCACAGCGCATTGcgaccaccaccaacaccaaatTCGATTTGAACATCTTCAGCGAATTCGATCAAATGgaattcaacaacaacaacaacaacaacaacaacttgaaTCGCAGTCAATATcagaataacaacaacaacagcaatattaatagcaacagcagtgcCAGCGAGAATATAAATCAGATCGAGAACCGCCACTTTATTAGCGGCtaccatcatcagcatatTGGAACGGATTATGAGCAAGTGATCAACTTTGTTGACTCGCCGCCAAACTCTGAGGAATCGTGGACAGAGATATCGCTAATCGAAGAACTTACGGTTATCGTAGACGGGCAGTCGAAGGATTCGCCGGGACCGCAGATAATCGACGTTCAGACCATCTATCTAAACAGCGGCACCCGCAAAAGACGAATGGATTGGGACTCACTGGACATTGGCCAGACCGAGAACTCCCCCACAGCATCCCAGAGCGGCGAGCTGCCCACCAAAGTGGCACCCCAGGAAAAGGATAAGCACAAGCGCGAGAAGCACTCTGgccgcagcagctggagcgatGAGATTGGCTTCGATTTGAATGCCGAGTTCAACAGCAGCTCGTATCTGAACAACAGTGAAAACTTTCTGTCGTTCTCCCCCACGCTGACCGCCCTGAAGCAGGAGCCCCAGACGGAGCAGATAAAGCCGAATCCAAAGCTCTCGCtggacagcagcggcaacagcaatgcCGCAGGCAATGTCTCTGCCAGCGTGGCGATTGCCAAGGTGGATGAGGCACAGAACTCACCGCAGCTGGGCCAGGAGACAGCCGCTGCCAATGGCAAACACGACCTGAGCGCCGGACtactctgtggctgtggctctcccCAGGGCTCGCCAGTGGCTGCCAGCGACTACGAGCTGGGCGGACAGCCAGACAAGGGCAAGAGCaatcctcagcagcagcagcagcagcagcagcagcagcaactgagcGTGCTTGATCCATCCAAGATAGAGCTTGGATCCGCCAACGGAGCGACACACGCCGAGGATCACAAGTTTCAATAcattttggctgctgccacatcgATTGCCACCAAGAACAATGAGGAGACCCTCACGTATCTGAACCAGGGCCAGAGCTACGAGATCAAGCTGAAGAAGATCGGGGACCTGTCCCTCTACAGGGATAAGATTTTGAAGAGCGTGATCAAGATATGCTTCCATGAGCGGCGCCTCCAGTTCATGGAGCGCGAGCAGATGCAACAATGGCAGCAATCCCGACCCGGCGAGCGCATCATTGAGGTGGATGTACCGCTCTCGTATGGCCTGTGCCACGTCTCGCAGCCCCTGAGCTCCAACTCGCTCAACACTGTCGAGATATTCTGGGATCCACTCAAGGAGGTCGGCGTCTACATCAAGGTCAATTGCATTTCAACCGAATTTACACCAAAGAAGCACGGCGGTGAGAAAGGTGTACCATTTCGACTCCAGATCGAGACCTACAtagaaagcaacaacagcaacacgaacggaacaagcaacaacaatatcaGTGGCAACAGTAACGGAAACGGAATCGGAAACGGTAACAGCGGTTCAACTGCCCCAGGCTCACCGGAGCGTACACCCAATgggggcagcaacagcaactgcagcgtCGGAGGTTTATCCATTTCCAGCGTTAAGCACGCCGTCCATGCAGCTGCCTGCCAGATCAAGGTGTTCAAGCTAAAGGGCGCCGATCGCAAGCACAAGCAGGATCGCGAGAAGATCCAGAAGCGTCCGCAGTCGGAGCAGGATAAGTTTCAGCCCAGCTACGAGTGCACCATCATGAATGACATGTCGCTGGATCTGGTTATGCCGGCCACCACCGCGGGCTGCTACAGCCCCGAGTATATGAAGCTTTGGCCAAATTCGCCCTCGCATATACCCAAGTACGATGGGATGCTACCGTTCGCATCAAGTGCAGCATCGCCGGcgaccagcggcagcagccccaTAGCCATCAACTCGGTGACGTCAACCAATTCGCCCAATTTCAAGCTGATGGACGCCACCAATATGGTCTCGCCGCAGCATGTGCCCGCGGAAATGGATGActttCAGAATCAGAACATAATGCCGGAGTCGACGCCGTCACAAGTGACGCAGTGGCTGACCAACCATCGCCTCACAGCCTATCTATCGACGTTCGCCCACTTCTCGGGAGCTGATATCATGCGcaTGTCCAAGGAGGATCTAATACAAATCTGTGGCCTGGCCGACGGCATACGCATGTTCAACATATTGCGAGCCAAAACCATCACGCCTAGACTCACGCTGTATGCCAGCATGGATGGCTGCAGCTACAACGCCATCTACTTGCTGTCGAACAcggccaaggagctgcagcagaagctgtTCAAGACGCCCGGCTTCTACGAGTTCATGACCAAGGCGAGTGCCCAGGAGAACGGGggagctgctgccgttgcggccgccgctgctgctgctgctgctgctgctgcaatgtaCAACAACTGGAGCATGCACTCAAAGTACTCGGGCAGCGGCTCGAACATCTTCAACGAAGCCAACAAGAGCTGTGTTTACATCTCTGGGCCGTCGGGCATACTCGTTAGCGTCACCGACGAGGTGCTCAACAACGAGATCAAAGACGGCAGCCTCTATGCCTTGGATGTGCAGGGCGGCAAGGTCATCTTGAAGCTGATCAACAAGCAGGACAACAATTGA
Protein Sequence
MALSFLSQNSGLLDLQSIFDPQYSELQQEHSNHHQHNNNNNNNNNPHHQPHEELQLQLPQRIATTTNTKFDLNIFSEFDQMEFNNNNNNNNNLNRSQYQNNNNNSNINSNSSASENINQIENRHFISGYHHQHIGTDYEQVINFVDSPPNSEESWTEISLIEELTVIVDGQSKDSPGPQIIDVQTIYLNSGTRKRRMDWDSLDIGQTENSPTASQSGELPTKVAPQEKDKHKREKHSGRSSWSDEIGFDLNAEFNSSSYLNNSENFLSFSPTLTALKQEPQTEQIKPNPKLSLDSSGNSNAAGNVSASVAIAKVDEAQNSPQLGQETAAANGKHDLSAGLLCGCGSPQGSPVAASDYELGGQPDKGKSNPQQQQQQQQQQQLSVLDPSKIELGSANGATHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSLYRDKILKSVIKICFHERRLQFMEREQMQQWQQSRPGERIIEVDVPLSYGLCHVSQPLSSNSLNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIESNNSNTNGTSNNNISGNSNGNGIGNGNSGSTAPGSPERTPNGGSNSNCSVGGLSISSVKHAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMNDMSLDLVMPATTAGCYSPEYMKLWPNSPSHIPKYDGMLPFASSAASPATSGSSPIAINSVTSTNSPNFKLMDATNMVSPQHVPAEMDDFQNQNIMPESTPSQVTQWLTNHRLTAYLSTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTITPRLTLYASMDGCSYNAIYLLSNTAKELQQKLFKTPGFYEFMTKASAQENGGAAAVAAAAAAAAAAAAMYNNWSMHSKYSGSGSNIFNEANKSCVYISGPSGILVSVTDEVLNNEIKDGSLYALDVQGGKVILKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00489142;
90% Identity
-
80% Identity
-