Dgri002483.1
Basic Information
- Insect
- Drosophila grimshawi
- Gene Symbol
- pnr
- Assembly
- GCA_018153295.1
- Location
- JAECXY010001376.1:19765757-19772967[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3 3.2e+03 -2.4 0.0 21 28 274 281 269 283 0.78 2 2 6.3e-17 1.6e-13 49.8 3.8 1 35 750 783 750 784 0.98
Sequence Information
- Coding Sequence
- ATGTATAATAATGTACCACATAAGTATCGTCAAGTTTGTCGATTGTGCCTCACATTGGTTAGCGACTGCGATATCGCAGATCTACAAATTTATAAGCCAAGCAGCAGTAGCAGTCCCCCAAATGATAAAATTCAACAGCAACAACAACAACACAACGTGAAATCGTGCAATATTATTCATCGAAATGTATCCAAATGCGACCCAAATAATACATGTTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGTCGCGCAATGCAATAATAATAATATGGAGAGGGGAACGGGAACGGGTATCGCAGCCTCATTCAATTCACATATGCATAAAAACAATTACAACACACCAAGTGTGCCTTCCTCTGCTGCTGCTGCTGCCTCTGCTTCTGCCTCTGCCAACCCGCCATACACCAATATTTTTGCTCGAGTGTTTTCAAATAATAGTAAGCAAGTTGAAACAACAGCAGCCGAATTATCACAATTCAATCAATCAACATCATCCACAACAACATCCACACAAGATTTAGAGTCGCAACCAAAATTAGTTAAATGCGAAACGGAATCATTTTCACAATCGTGCCAATCGAATGTGGCCTACGATAATAATACAGCTAATACAACAACAACAGCAGCAGCAGCAATATCAACTCCCACTAAAAATATATTTCTTCAAAACGTGGAGTACAACAATCAAGAGCATAAAGATGATTCATCAACGCCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGCCATTGCCGAACGATAGTTACCCTTCCGTTGTGTGCCGTGACTGCCGAATTAAGCTCGAATCATTTTGGAAATTTCGCAATATGGCACTGAATTCACATTATGCTTTGAGGGAATTTTTGACATTATCAGAATCGTCTAAACTTAATTCAAACGATTTGGAAATGAAACTGGATGCAATTTTAAAGTCTTCATCGGAAGCAATAGCTGCTAAGGCACTGACTGAGCTGAGCAAATCCTCAAAAACAAGATACAGCCAACGGCAACCGACACTTGATGGTATTTTGAAATCGAATAAGGAGAAGGAGCACCATCAAATTAAAATCGAAAATCAGATCAAGGAGTTTCAAACGCCTTTAATCTATTCTAATTTGTACGAAATGCCAACTCAACCAACTGTCAACACAATTGAGCGTGATGCAATAATGAATCAGAAACCAGATACCAGCAGTATAGCATCCAAACTGAAATTATCGGATGGATATATGGAATTAGATAACGGTGTGGTGTGTGAATCAGTAAATACTAAAGTGTCCGATGTTGAACAATATAAGAAGCAATTAGAGACTGCCGCAGTGCTTATGGATATAAGTAAAAAAATTGTCATCTCGCCACCATGCTCGAATCCCCAATCTCCTTGTCTTTCTGCATTTGTAGATACAAATATGAAAAGTTCTGTGATAAAATCAAAACGTCCATCAAATGATAATGATATGCAAGATGGCATGGAAATCGACTTATCGATCAAAAAGCTGAAAACTGATCCTTGCAGTCAACAGAATTTAGTCGCCCCAATCACACGTAATCTTTGCCAAGCCCCAATACTTGACATCCGTGCAAGTCCTTTAAGGACCGATGCTGATTTTAAGAATTATAGTATTACGATTAATGAAGTCGTTGGCCCCTCTAGCTACCAATTGAACACAAAAACAAAACAGAATACCGACAGTATTGCATCGTGTCTATCGGACTCCGAAGACAGTTCCGATTCAAATAAATTAGAAATGGACATTGCATCGGCGATCTACGATCGTAAGACACCGGAGAGCGTTAGTTCAGATCATGCAACAGATGCGGCAACCACTCAACTATGGCAGGCATTAGCTCGATCTGCAGCTAAAAATAAAGATGAGAGTCGAGCAACGCAACTTTTGCGAAATATGATGAGTCAATCATTTGTATTTCCGACGCCGTCAACTATAGCATTGACAAAAGTACCTGTAGAGCCAATACCACTTTTAAAGGACATGTCCGAATCGCAATCGAATGTTGTTAAAATATGTCGAAGAAAGCAAAGTTTTCCAACAAAATCTGATTGCGTCGATGCTCCAGATGTTAAGGTGGCCGACACCTTTGTTCGTTCAGAAACAGCAATTACCGAAGGGATCAAAGATAAAAAGAGCCTAAAGTGTATAAGCAGCAGCACAGCTTTATCCAGTTCTCAAAAGGATATGTCCTGCTCGAATTGTGGTACGCTAACAACAACAATTTGGAGACGCAGCGCCCGTGGCGAAATGGTTTGCAACGCCTGCGGATTATACTACAAGCTGCATGGCGTCAATCGACCCCATTCGATGAGACGCGATACGATCCATACTCGGCGCAGGCGTCCAAAAGAGTGCGAGAAATCCAAGAAAAGAACCAGGCACTTAGCATGCAGCTCGGCGGTGGAATATGAGTCGGATATCATAAATATCTCCATAAAATGCAAGAAGCCAGACTTGTCAGTATGTCAAGAGACGCCCACTCTCTCAGATTCACCATTTAACAAATATAAAACGGAAATAGCTGAGACAACAGGAACGGCCGAAACACTCAAAGATGTTATTTTAAAACAAACAAAATCACAATCTTTGCCTGAGTTCAATGAAACCCACGCAGGCGAGGAACTATCTGTACCTCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATACAACGCCAAATAA
- Protein Sequence
- MYNNVPHKYRQVCRLCLTLVSDCDIADLQIYKPSSSSSPPNDKIQQQQQQHNVKSCNIIHRNVSKCDPNNTCCXXXXXXXXXXXXXXXXXXXXVVAQCNNNNMERGTGTGIAASFNSHMHKNNYNTPSVPSSAAAAASASASANPPYTNIFARVFSNNSKQVETTAAELSQFNQSTSSTTTSTQDLESQPKLVKCETESFSQSCQSNVAYDNNTANTTTTAAAAISTPTKNIFLQNVEYNNQEHKDDSSTPHITIQIFNCLSIKPLPNDSYPSVVCRDCRIKLESFWKFRNMALNSHYALREFLTLSESSKLNSNDLEMKLDAILKSSSEAIAAKALTELSKSSKTRYSQRQPTLDGILKSNKEKEHHQIKIENQIKEFQTPLIYSNLYEMPTQPTVNTIERDAIMNQKPDTSSIASKLKLSDGYMELDNGVVCESVNTKVSDVEQYKKQLETAAVLMDISKKIVISPPCSNPQSPCLSAFVDTNMKSSVIKSKRPSNDNDMQDGMEIDLSIKKLKTDPCSQQNLVAPITRNLCQAPILDIRASPLRTDADFKNYSITINEVVGPSSYQLNTKTKQNTDSIASCLSDSEDSSDSNKLEMDIASAIYDRKTPESVSSDHATDAATTQLWQALARSAAKNKDESRATQLLRNMMSQSFVFPTPSTIALTKVPVEPIPLLKDMSESQSNVVKICRRKQSFPTKSDCVDAPDVKVADTFVRSETAITEGIKDKKSLKCISSSTALSSSQKDMSCSNCGTLTTTIWRRSARGEMVCNACGLYYKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRTRHLACSSAVEYESDIINISIKCKKPDLSVCQETPTLSDSPFNKYKTEIAETTGTAETLKDVILKQTKSQSLPEFNETHAGEELSVPLNLVSSENNAKLTYNAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00599244;
- 90% Identity
- iTF_00553425;
- 80% Identity
- -