Dgri003931.1
Basic Information
- Insect
- Drosophila grimshawi
- Gene Symbol
- GATA6
- Assembly
- GCA_018153295.1
- Location
- JAECXY010000311.1:12392820-12399799[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5 6.2e+03 -3.4 6.7 4 32 281 307 280 311 0.81 2 2 2.3e-17 5.6e-14 51.2 6.7 1 34 334 366 334 368 0.97
Sequence Information
- Coding Sequence
- ATGGTTTGCAATAGTATTGAAATTGTCGATATCAAGATGCAGGTGAAGCAGCGACGCATCCTAACAACAGCGGGTACACTCGAGCTGAACGAGGCGCATGAGGGCGACCACAGCAACAACAACAGCAGCACCGCCAGCTCGAATTCGGCACCCGAGACGCATATTGAGTATCAGCGGAGTTCACATCACTCGCCCCACTATATTCAAATGGCGCCGCGGACTGCGGCCGAGGTCGCCGATCAGGTGGCACATCCTAGCACACTCTATGCGTATCCCTCGGGCCAGATCATATGCAGTAGCGATGATGTGGCGCCCATTAAAATGGAGACAATTGACAAGAGCGATGACACGCCCGGCGGCAATCTGTACTATGAAACGCCCGTTGTGGATGCCAGCGTGCATGCAAATGAGTCAAAGACCTATGCGGATTTGGGCAATGCCTATGCAACGTTTACGCCCAACACGACGTTCAGCAGCAACAGTTATACGACGGCAACATTGCAGCAGGGGAACACCATTTACAGTGTGCCTGGGACGACACAGTTCATAACCAAATCCGATCCGAACTTGAATCCGTTGAGGCAGGCGCCAACGGTTCCATATCAAGCGCTATCGTTTATAGACAGTGCCAGTGGTGGTGATCCTGGGCTGTGGACAACGACTGGTGGCGATTATCCGAATGTGTCCTTTACGAACTATCAAACGCAGGTCATTGATGAATATCCCACGAGCAACATGACAGCCGCCCACTGGAACCCCGCTGGCAGCATTGGCAACTATGATCACGGACTGGCAGCGGCCAGCGCAATAACCTCAACCACCCATATGACGGAGCTGAAGTGCGACACCTGTCAGACATCGTTCATGCGCAAGGGCAACGAGTGGCCCAACTGCCCCAATTGCACCAGCTATGGGCGCAACCAGGCGGGACGGCATGTGCCACAGCGCCAGAAGCCGAAGGCAGCCGCTGCTCCAAACAATCGCCGCAATGGAGTCACCTGCGCCAACTGTTCGACAAACTCGACGACGCTCTGGCGACGCAACAACGAGGGCAATCCCGTCTGCAATGCCTGCGGACTTTATTTCAAGCTGCACAACATGAATCGACCCTTGTCCATGAAAAAGGAGGGCATTCAGAAACGCAAGCGCAAGCCAAAGAACAATGGAGCATCTATGCCCCATCGAGTGCTGCCAAGCATGTCGCAGGGTGTCAATTTGATGGTGAACAATGGCTTAGTGTATCCATCACAGGTGACTGTGGGATTGCCGAATAGCCAACAGAATGCGAGTCCCGAGCTGCATGATATGTCTGCAACTGGACCCGCTGGCGGACAGCGTGTGGTGACCATTCCGCTTAATCCTGCAGTGCCGACATCCGATGGCACATTGAACATGTCGCGTCATCATATTGCACAGTCTGTTCCTCCAATCGAAAGTGGTCGCAGTTCCAATAGCGAGCTGACTCCAACTGTTATAACGCGCACAGGTCTGCCAGAGCGCTCATCGAATAACTAA
- Protein Sequence
- MVCNSIEIVDIKMQVKQRRILTTAGTLELNEAHEGDHSNNNSSTASSNSAPETHIEYQRSSHHSPHYIQMAPRTAAEVADQVAHPSTLYAYPSGQIICSSDDVAPIKMETIDKSDDTPGGNLYYETPVVDASVHANESKTYADLGNAYATFTPNTTFSSNSYTTATLQQGNTIYSVPGTTQFITKSDPNLNPLRQAPTVPYQALSFIDSASGGDPGLWTTTGGDYPNVSFTNYQTQVIDEYPTSNMTAAHWNPAGSIGNYDHGLAAASAITSTTHMTELKCDTCQTSFMRKGNEWPNCPNCTSYGRNQAGRHVPQRQKPKAAAAPNNRRNGVTCANCSTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGASMPHRVLPSMSQGVNLMVNNGLVYPSQVTVGLPNSQQNASPELHDMSATGPAGGQRVVTIPLNPAVPTSDGTLNMSRHHIAQSVPPIESGRSSNSELTPTVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00599243;
- 90% Identity
- iTF_00599243;
- 80% Identity
- -