Dgri012523.1
Basic Information
- Insect
- Drosophila grimshawi
- Gene Symbol
- JARID2
- Assembly
- GCA_018153295.1
- Location
- JAECXY010000044.1:16321395-16323437[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.5e-23 2e-19 69.5 0.0 6 89 90 171 85 171 0.92
Sequence Information
- Coding Sequence
- ATGGCCAATAATACGGCATTCCCCAGGCACGATGATCCCACACAAATGGTCGAGGCGCCCATTTTTAAGCCCACCGAAAAGGAGTTCGCTGATCCCATTGAGTTCATTGAGCGCATCACACCAATCGCCGCCAGATTTGGCATCTGTAAGATAATACCGCCCGCCAGCTTTAAGCCGGAGTGTCGGATTTCGGATGAGATGCGATTCACGGCGTATAATCAGTATGTGCACAAGATGTTGCATCGCTGGGGACCCAGTGCCAAGGAGTTGAGTGCCATCAAAAAGTATTTGGCTACGCAGAGCATTGTGATGAATCATGCGCCCTGGATTGGTGGCATGGAGGTGGACTTGCCGCGTCTCTATCACACCGTGCAGGAGCTCGGCGGCCTCAAGGAGGTCATCGAGAAGAAGAAATGGGCACGTGTCGCCGAAGAGATGTGTATACCAAAGCTCGCCCAGGATCGGGTCACCAAACTGGATGACATTTACTGCAAGTACTTGTTGCCCTACGACACCCTCTCCCCGGCGGAACGCCAAAAACTCTTCGACGAGGTCGAAGCGGATTGGGCCAAGCGAGAGGCACGCGCCCGTCGCAACGCGGATCGCTTTGTCAATTCAACGGAGAGCGTTTCTAATGTCGAGGATGATCTATCCACCGATGAGGATGATGAATCCGAGGAGGAACTCGACGGTGTCTCCATGGAGTGCATTGTCAAGGGTCGCAGCATGCCACTCAGTCAATTCTATCGGATTGCGCGCAACACTATGGCGCTGTGGTTCAAGAGCACCGATCCTACCGTTAACGAGGTGGAGGCGGAATTCTGGCGACATGTCGCCGTCCGCGATAGTCATGTGTGTGTGCATTCCGGCTCCATTGATAGCTCCGGCTGGGGATATGGTTTCCCGAGTCCGGGTCCCAAGGGCAAGGGTTCGAATTATGCGCGTCACCCGTGGAACCTGAAGGTGCTCACAAATAATGCGGGCTCGGTGCTGCGCTCGCTGGGACCTGTTATGGGCGTCACAGTGCCCACACTGCATGTGGGCATGCTCTTCTCCGCCTGCTGTTGGTATCGGGATCCTCACGGTCTGTCCTGGATCGAGTATTTGCATACGGGCGCCTCCAAGCTCTGGTATGGCATACCCGACGATCAGAGTGCCAATTTCCGGTCGGCACTCACGTCTCTGATTCCGACGCACTGTCAGAACAAGACCATTTGGTTGCCCTGTGATACGGTGATGGTGCCGCCGCACATGCTCACCGATCGCGGTGTCTCACTGTGCCGCATCGAGCAGAAACCGGGCGAGTTTATTGTTGTCTTTCCGCGCGCCTACACCTCCAGTCTGGCCACCGGCTATGTGGTCTCCGAGAGCGTTTACTTTGCCACCAACTCATGGCTGGATCTGGCCAAGGATGACTTTAGGGACATCCATGAGAGCTGTGAGCCGGCCATGTTCTCACTGGAGCAGCTGCTCTTTGCTTTGGGCTACGATCAGCGCGTCAATTCGGACACATTGCATCAGATGCTGCCCATGCTAAACGATGTGTGCGAGAAGGAATCGGCGGCACGTGAACAGCTTAGAGCCGCGGGCGTCACAGCCAGCGAAAAAGTGCAGGCGGAGAAGGGACAAAAGGGGACGAAGAAGCAACAGCAGCCGCCGCACAAATCCATCGATAGCGAATGCGATCTGTGCCGTGCCAATCTGTACATATCGATGGTGCGCACCGAGGATGGCAACATCTACTGCTTGCAGCATGCCCTCAAGAATATCAACAGTGGCAATGTGCAACCGAAAATTTGCAAACTGGTCTACGCCTACAATGTGGACGATGTGCAGCAACTGATCCGCCAGTTGCAGGAGAAGATTAATCAGATGCATCACAAGGCGGCCGTTAAGAAAAAGTAG
- Protein Sequence
- MANNTAFPRHDDPTQMVEAPIFKPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHAPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNSTESVSNVEDDLSTDEDDESEEELDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATNSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSDTLHQMLPMLNDVCEKESAAREQLRAAGVTASEKVQAEKGQKGTKKQQQPPHKSIDSECDLCRANLYISMVRTEDGNIYCLQHALKNINSGNVQPKICKLVYAYNVDDVQQLIRQLQEKINQMHHKAAVKKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00665419;
- 90% Identity
- -
- 80% Identity
- -