Dgri010983.1
Basic Information
- Insect
- Drosophila grimshawi
- Gene Symbol
- retn
- Assembly
- GCA_018153295.1
- Location
- JAECXY010001366.1:8588241-8605792[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8 5.9e+03 -2.5 0.0 14 64 116 137 108 150 0.57 2 2 1.6e-26 3.4e-23 81.6 0.0 2 89 219 304 218 304 0.96
Sequence Information
- Coding Sequence
- ATGGGCCAATATGAGCCACGTAATAGCCGCAAAGAAGATGAAGTCGCGAGACGAGGCTGGGACTGGGGCTGGGGCAGAGGCAGGCAGGCGAAGGCAGAGGCAGAGGCGGAGGCGGAGGCTTCCCACGGTGATCGTACGGATGACGAGATGCGCGACTGTGATTCCGTTGACGGTGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCAGCCCGGCTCAGTCACACAGTTGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGCCATCATCATCAGCTGCCGCCGAATCATCCGCTCAACGCCCTGGGCAGCTTTATGAGCATCGGCGGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTCCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTTGGCCTCATGGAGCAGGACTATGCAGCGGCGGCACATGCCGCAGCCTTTGGCGCCAACATGCTGCCCACAACGATCAAAGCGCGCCACTTTGCAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGAGGCACGCCCATCAACCGCCTGCCCATAATGGCCAAATCGGTGCTGGATCTGTATGAGCTATATAATCTGGTGATAGCACGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCGGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTACCCCTACGAGTGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCACTGACAACAATTTCGCGACCACCGTTGCCTGGGGGCATGCAACAGATGTCGCCGTTGGCGCTGGTCACACACGCGGCGGCTGCGAACAATCAGCAGGCGCAGGCAGCGGCCGCAGCGGCAGCAGCACATCGACGGCTGATGGGCGGACCGGCCTTTGGCCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGCATGATGGACACACGTGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGCGAAGCCTTGAACCTTTCCGATTCGCCGCCAACTTTGAATTTGAATCACATAAAACGGGAAAGAGAACGCGATCCGACGCCAGAACCAACGGATCTGGAGGAAACGACGCTCAGCCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAACGGCACCAATGCAAATGGCGAGCAGCAGTTGATTGTCAATCTCGAGCTAAATGGCATTAAGTACTCGGATGAGATTGTGAATGGTGCAGGAATTGGGGGGGTTGGTGTCGGGGTCAGCGGTGCAGTGGGTGCAAGTCTGCTTAAGGATGCTGTGGTCAGTTCATAG
- Protein Sequence
- MGQYEPRNSRKEDEVARRGWDWGWGRGRQAKAEAEAEAEASHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMSIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTIKARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTTISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMDTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDLEETTLSLLSGMQFQVARNGTNANGEQQLIVNLELNGIKYSDEIVNGAGIGGVGVGVSGAVGASLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -