Basic Information

Insect: Drosophila glabriapex
Gene Symbol: -
Assembly: GCA_035042305.1
Location: JAWNLN010000060.1:4161794-4191987[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0051 0.32 11.4 0.2 1 23 1246 1269 1246 1269 0.96

2 8 0.014 0.9 10.0 1.0 1 23 1274 1297 1274 1297 0.96

3 8 0.00019 0.012 15.9 0.8 1 23 1521 1544 1521 1544 0.96

4 8 0.003 0.19 12.2 0.8 2 23 1553 1574 1552 1574 0.97

5 8 0.047 2.9 8.4 0.3 1 23 1581 1604 1581 1604 0.96

6 8 1.8e-05 0.0012 19.1 1.4 1 23 1610 1632 1610 1632 0.97

7 8 9e-06 0.00056 20.1 0.4 1 23 1637 1659 1637 1659 0.99

8 8 0.011 0.68 10.4 3.4 1 23 1665 1687 1665 1687 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0051	0.32	11.4	0.2	1	23	1246	1269	1246	1269	0.96
2	8	0.014	0.9	10.0	1.0	1	23	1274	1297	1274	1297	0.96
3	8	0.00019	0.012	15.9	0.8	1	23	1521	1544	1521	1544	0.96
4	8	0.003	0.19	12.2	0.8	2	23	1553	1574	1552	1574	0.97
5	8	0.047	2.9	8.4	0.3	1	23	1581	1604	1581	1604	0.96
6	8	1.8e-05	0.0012	19.1	1.4	1	23	1610	1632	1610	1632	0.97
7	8	9e-06	0.00056	20.1	0.4	1	23	1637	1659	1637	1659	0.99
8	8	0.011	0.68	10.4	3.4	1	23	1665	1687	1665	1687	0.99

Sequence Information

Coding Sequence: atgaGTGCCAACAAGCGACgaagttgcaacagcaacaacaacagcaacgataaCAGCAACACAGCTGATCAAATTGATAAAGATGTGCAGAGTGAGGAATGCCAAGGAGTGCCAACAATTGATGTGCAACGCTTGTGTCGCTGCTGTGGCAAAGGCGACATGGAATTGCTCAAACTGTTCGAGGAGAGCGCTGCGACAGCCAATCAGAAGACACAAACTCAATTTGCGACTGCGCAAATCCGCCAACGCCAAACGACGACAACAGGCGAAAAAGCgaaaacagcacaaaaacaacaaaaacaagagaaacaacaacagcagcaagagcgcAAAAGTGATAATCCTGTGGAATATGCGCTGAGTGGAGCACACAGCAGCATGGACATTGTGTTAGAGGAGATGATCATTTGGATGCTCAATATCTCACGTGACGATGGTCTGCCTCAGGAGATTTGTCGTCAGTGCAAGGCTCAATTCATAATGGTTGCGAAATTTCGGCGGCGATGTGTGCGCGTCCAGCAGCGACTACATGACTACGTCCAGGGCATGATCGAGCACAAGTCACAGAGGGAGGAGGAGCGCACACAACAGTCACAGAGCAAGCCACAGGCAAATGAGGCGTCCGCGGCAGATTACATGCATCTGCCACAGTCACAAATGGAGCGGAAGCGTCGCCTGGTGCCAAATACGGAATCATCGTCGCTGCCAAAATATACCAAGACTGATGCCACACAGCTGCTGACGCCGCCCAAGCTGCGGCGTATGCAGTTGCGAGTGCGCACAATGCGCACTGCCTCCTTGCCAGCCAGTAAAGTTGAGACTGAAACGGAAGCGGGAGCCACAGAAACGACCAGCGACTGTCGACTGAGTGAGACGAGGCAGCGAACGCCACAGAGATCGCCATACAGAGCTAGACTTATTCACGTGCCATGGAAAACGAAAGCGGCACGCAAACAGATCCCGGAAACGTGGTCCACGTCCCTCTGTCGAACAGACTCTGTGGCGCCGGAACTGCCCAAAGAGCAGGAGTCAGCTAATGGAACGGCTGCTTTAGCGAAAACAGCATCCGAAGCGGGTCCAAATTCATCGGAAGATTTGAGTGATTTGTCGGTGAATGTATGTCGAGGCTTCGACAACGAAAACGGCAGCAGCTCCAATTCTTCCACAATAGTTAGCCCACAGCCAACTACAAATGTGAAGCTCAGGTTCCCACCAAAACGCTGCTCGCCCAATAAAACTCGTGTTTTGCGGCGACAGGCCAGACGCTGCTATGCGCCGGCCAAGAGGACGAGGCGCGTTTTCAAGAAGGCAAATGCGGCAACTGAAGCAGCTAAGGTTGAGCTGTGCTGCGCAGAGGTGCTTAGCAGTAAAACAACAGTGGCAACGGAGGCCGTTGACCAAATGCCAACCAGCTCTGCGAATGAGGagccaaccagcaacaacagcagcaacagcagaacaCCCGAAAGTCCAGAGATAAGCCTAGTCGATGAGCAGGAAAGTAAAATCATTGAGAAAGCAAAGAATGGGATGCCAGAAACAGAGTCAAATGCACAGCGGGAAGATCCGCAAATCAGCACGCCAGTAAGTCAAAGCGAAAATACAGAGGAAGAGCTGGAGCCTGATGAGGCAATCAAATGTTCGCCAGACACTTTGGGCAATGCTACTCAGGACAAGATGTCGATGGAACAAATGGAAATCATATCAGAAGAAGTGATAACGGCAGAGGGGGAAGTAAATGGAACAGTAGAGACAACGCTTTTGAGTCCTGTGCAGCTTGAGGAATTAAGCTCTTCCAGCATGGATCacatggagagagagagacggcaATCAGGAACGCCCGAGGTGCCAGCCGCAGAGTGCGAGGTAGAAGTGAGCCTAACAAATGAGGAACAAACGTCGGAGCAAATGTCGGATCAAACAACGGATCAAACGTCGGATCAAACATCGGATCAAACGTCGGAGCAAACATCGGATCAAATGTCGGAGCAATCTTCGGAGCTTATAGTCAGTATACCGCTAGATGCGCTTGGCGAGGATCTACAGCGTAAACTATGCAACGAGTCGGAGCCGGCAGCAAATGAGTTAGTCGACGAGTTGAAGAAACCGGATGGGGAGCTCAAGGAGCCAGTGGAAGCGGACGatgtcaacaacaatgagaatgGCGAGAATTTTTGCCAGAGTGCTACAGCAGATAGCTTCAATGCTGCTGTAGCACTCGCAACCAAACCAATTGAAGCAGAACCCAACGGAGGCGGTGacggtgatgatgatgatgatgatatggaGTCACTGGAGAAACTACCTAATCTGCAGcacgaggaggagcagcagcaacagcatccacGCGCTTCTGCTAATGCCAGTTCCATGGATTTTTTGGCTGAATTCGAGAAGCATTGCGAAAAGTCGCTCAAGCTGCAGGCAGCTGGACAGGAGCTGGCGGAGGCCAAGCAACAGTTGGCGGTGGAAATGAACGATGTGGAGAATACACTGCACGGCATACTCAATGAGATGCAGGATGAGCATCTCTATACGCCCGTCTGCACGCCCATCGATGAGTTCCTTACGCCCGCCGATTATGCGCCGCCCACGCCAGCATCGCCCAATCTCTTCGAGCAGCCAGCGGAGGCACAGCagccactgcagcagcagcagcaacagcagaaggaGGGAAATCTCTTTGATAGCAGCACTTTTAGCAATGAGCTGATTGGCTTTCAAAATGATATGCCCTGCTTTGAGAATATAGAGTCTACGCCGGAATCGATGGCTGTGCAGCAGAGCCTGCAGCTTGAGCTGACACAGCTGTTCAATGAGCTGCAgccagcacaacaacaacagcagcagtcaacacaacaacagcagcagtcaacacaacaacagcagcagcaacagttgcagctgcagcaggaaACTGTCAGCTATGAGGCACTATATCAAACAGCACCACTTCCTGTCGCcaacaacagtaataacaataaattgcagGTCATACAAATGACGCCACAGGAGACGCTGTGGCAGGCACAggctgcacagcagcaacagcagcaacagcaaccacaacagcagccgcaggcgacaccaacaacacaacTGCAATGGTCCACTGTGGGCGGCTTGGAGGCGATCAAAACGACGCCCAGTCTGGATAATctggacagcagcaacagcaacaacaataacagcaacaataacagcaacacaaccacctccaccacaaccaccacctACTACATTAATGCCAGTGATCTCTAtcaaacacaacagcagcagcagcaacagcctaGCGAGTCTTATGCTTTACTGGACAGCAATGATAACTAtgtgctggagcagcagcagcaacaacaaccacaacaacagcagcctaTTATGATACTCATACAGCAGccggagctgcagcagccagtgGCTTCAGCCAGCAATCCGCAGCAGGCGCCGCTTCACATCAACTACAGCAATGAGCTGCAAGcttatcaacagcagcagcagcagcaacaacatgcacatcaaccacaaccacatccacatcaaAAACCACAagcacatccacatccacagcaacaacaagttcaaAATACAGTATTAGGTTTACCAGCAGTGGTGCCGCCGCCCACTCGTGGTCGTCCGCCCATGTTAAAGTGCCGCTTCTGTCAGAATGGACCGCGCTTCTCGAGCAGTCTGGAGTACAGTCGCCACATCATTGAGCTGCATCCCGCCGTCGCGCCATTCAACTGTCCGTACTGTCCGCTCGCCTTTGCCGGTCGCAGCAAGCGCAACCAGCACATCCTCAGTAGCCACATTGTGCAGCAGTTTCACTGTGGTCAGTGCTCGCAAATGTTTCCCTCGCAGCGTGCGctcgatttgcatttgcagcgaTTACACATGCCACTCGCCACGGAGCcgacatcggcatcggcatcgagTGGCACAGCATCAGCTGGTGTCCGTCTAGAAGAGGTTCAACTGCGGATTGCCACCACCAATgatctgcaacagcaacagcagcagcagcagcagcgacaacatcAGCGTCAACCACTTCAGCAGCAATCAGTTGCACATATGCGTGCCTTGGAATTACAGACAAGCCCATCCAGACCACGCAGGACGCGCATACTGTGCTGCCCGGACTGCGAGGACTGCACTTCGGCCAGTGGCCACACTCAATGCAGCGTGCAGCCATACGAGGAGCTGAACACTTTGCAACCACCGCCCACGGTGCTGACGCCGCCGTCGACAATTGCATCGCTGCCGTCGCCGCAGCCGGCGCCGCATATAACGCTGCCATCACCGGAGCAATCGGAGCCAGACTCGACGACGGCAACGTTGCGGCAATTCCGCAAACGTTGCACGGTCAACAGCTCGGCAACAGCGGGgccagcagtagcagccgctacagcagcagcagcagcagcagcagtagcaacaacaacaacaacaacaacaatgctaaCAACCACTGCCGGCTCGCCATCGCcgtcgtcatcgccatcgtcgtcgACCATGGAGACAACAAGCGCCACACTGCAACTGGGCAAACTGCGTGGCACCCATCAGTGCGTCATCTGCGAGAAGCGTTTCACCAACGTTATTGCGCTGCGGAAGCATCAGCAACTGGCCCACGATTCGCAGACGACGATGCCGTGGGTCTGTTCGATTTGCAAGCGAGGATATCGAAAGCGCACCGATATGGATAACCATATGAAATCGCACGAGCCGAAGGGTCGACCCTATGAGTGCAACGAGTGCTGGGTGCGATTTCCGGAGTTCAAGCAGCTGGCGATGCACAAGTTCACCGTCCACGAACTGATCAAGCCGCACACCTGCGATGAGTGTGGTAAACAATTTGGTACGGAGAGCGCCTTGAAGACGCACATTAAGTTTCACGGTGTGCGAGGCTTCGAGTGCGAAGAATGCGATGAGGCATTCGCCTACATCAAAGATTTGCGCAAACATCGTCGAACCCACAACAGCGAACTATTTTACAAATGCGATTACTGTCCGCGCACGTTTCTACATTTTACGCCCTATCGCGTACATATGAACACCCACCTGCCGCTGGGTGTGTTCCTTAACGACAAGATGCCCAGTAGCGTTTGCAGCAAAACGGAGAATCCGTCAAACACTGAAGAATCACTGCTGCCATTGACGCCGCTGAGCAACTGCAATGgaaacagtggcagcaacagcggatTAGAGGACTGTCCCGGCTCTGCGGAGATGGTGGTGGAGAGCAGCATGGCGGCGCCATCTTTGGACATGATTGTCGATACGCCATAA
Protein Sequence: MSANKRRSCNSNNNSNDNSNTADQIDKDVQSEECQGVPTIDVQRLCRCCGKGDMELLKLFEESAATANQKTQTQFATAQIRQRQTTTTGEKAKTAQKQQKQEKQQQQQERKSDNPVEYALSGAHSSMDIVLEEMIIWMLNISRDDGLPQEICRQCKAQFIMVAKFRRRCVRVQQRLHDYVQGMIEHKSQREEERTQQSQSKPQANEASAADYMHLPQSQMERKRRLVPNTESSSLPKYTKTDATQLLTPPKLRRMQLRVRTMRTASLPASKVETETEAGATETTSDCRLSETRQRTPQRSPYRARLIHVPWKTKAARKQIPETWSTSLCRTDSVAPELPKEQESANGTAALAKTASEAGPNSSEDLSDLSVNVCRGFDNENGSSSNSSTIVSPQPTTNVKLRFPPKRCSPNKTRVLRRQARRCYAPAKRTRRVFKKANAATEAAKVELCCAEVLSSKTTVATEAVDQMPTSSANEEPTSNNSSNSRTPESPEISLVDEQESKIIEKAKNGMPETESNAQREDPQISTPVSQSENTEEELEPDEAIKCSPDTLGNATQDKMSMEQMEIISEEVITAEGEVNGTVETTLLSPVQLEELSSSSMDHMERERRQSGTPEVPAAECEVEVSLTNEEQTSEQMSDQTTDQTSDQTSDQTSEQTSDQMSEQSSELIVSIPLDALGEDLQRKLCNESEPAANELVDELKKPDGELKEPVEADDVNNNENGENFCQSATADSFNAAVALATKPIEAEPNGGGDGDDDDDDMESLEKLPNLQHEEEQQQQHPRASANASSMDFLAEFEKHCEKSLKLQAAGQELAEAKQQLAVEMNDVENTLHGILNEMQDEHLYTPVCTPIDEFLTPADYAPPTPASPNLFEQPAEAQQPLQQQQQQQKEGNLFDSSTFSNELIGFQNDMPCFENIESTPESMAVQQSLQLELTQLFNELQPAQQQQQQSTQQQQQSTQQQQQQQLQLQQETVSYEALYQTAPLPVANNSNNNKLQVIQMTPQETLWQAQAAQQQQQQQQPQQQPQATPTTQLQWSTVGGLEAIKTTPSLDNLDSSNSNNNNSNNNSNTTTSTTTTTYYINASDLYQTQQQQQQQPSESYALLDSNDNYVLEQQQQQQPQQQQPIMILIQQPELQQPVASASNPQQAPLHINYSNELQAYQQQQQQQQHAHQPQPHPHQKPQAHPHPQQQQVQNTVLGLPAVVPPPTRGRPPMLKCRFCQNGPRFSSSLEYSRHIIELHPAVAPFNCPYCPLAFAGRSKRNQHILSSHIVQQFHCGQCSQMFPSQRALDLHLQRLHMPLATEPTSASASSGTASAGVRLEEVQLRIATTNDLQQQQQQQQQRQHQRQPLQQQSVAHMRALELQTSPSRPRRTRILCCPDCEDCTSASGHTQCSVQPYEELNTLQPPPTVLTPPSTIASLPSPQPAPHITLPSPEQSEPDSTTATLRQFRKRCTVNSSATAGPAVAAATAAAAAAAVATTTTTTTMLTTTAGSPSPSSSPSSSTMETTSATLQLGKLRGTHQCVICEKRFTNVIALRKHQQLAHDSQTTMPWVCSICKRGYRKRTDMDNHMKSHEPKGRPYECNECWVRFPEFKQLAMHKFTVHELIKPHTCDECGKQFGTESALKTHIKFHGVRGFECEECDEAFAYIKDLRKHRRTHNSELFYKCDYCPRTFLHFTPYRVHMNTHLPLGVFLNDKMPSSVCSKTENPSNTEESLLPLTPLSNCNGNSGSNSGLEDCPGSAEMVVESSMAAPSLDMIVDTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00576613;
90% Identity: iTF_00518707;
80% Identity: -