Basic Information

Gene Symbol
grh
Assembly
GCA_035042305.1
Location
JAWNLN010000046.1:21405452-21425560[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3 1.6e+04 -9.3 13.4 78 115 248 286 187 304 0.55
2 3 0.58 3.1e+03 -3.0 3.5 92 101 571 580 536 599 0.50
3 3 7e-31 3.8e-27 94.9 0.2 24 152 712 836 698 839 0.91

Sequence Information

Coding Sequence
ATGATGCAGGATGCAACCAGCAGCTATGCCATCTCCTACACGGACTGGATAGCTGAGTCACGGCGCTATACCTTGGAGCCTGCACAGCAAGCAACGCCGCCCccgccaccagcaccaccacagcagcagcaacaccagcagcaacaccagcagcagccgcaacttcatcatcagcaacagctgcagccgcatccgcatccacatccacatcatcatcttcaAGCCCACCATCTtagtcatcatcagcatcatcatcagcattatGCGAGTCAATCGCCACCGCATTACTCGTATGTGCCGCCGCCCAAGGATGCAGCAGCTCAGTTGCAACAGCATCTGCCGCTGACCGCCGCTGGGCTCATGCAATCGGTGGCCGATGAGATTCAACTGAGCGAACAGCAATCgacaccgccgccaccaccaccgcccccaccacctccaccgccgccgccgccaacaGCACACGCCTCCAACACCACCTATGCGGTCTACAGCTACTACCGAGATGTCGATGTGGATGTCGATGTGGAtgcagagcaacagcagcagctgcagcatcatcatcagcagcagcagcagcacaatgcTAGATCACAAGaagatcagcagcagcttctgtGGAGCAATGCGAGCAGCACCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTAtcgcaaaatgaaattcaaggCTTTCTGCTTGGCTCACACCCCTCATCGTCGGCCGCCACGACCGGCGTTGtgtccacaacaacaatctcaaatcagcaacatcagcagcaacagcaacagcaacaacaacagcaacatcagcagcaacagcaacaacagcagcagcagcagcatcaacagcagcagcaacagcaacaacaacaacaaccgccaCATCCCAGCGACATTGTAACCATAACCACGGCGGGAGTGGGGAGTGCGGGCTCAATTGTCTCCGCCgcagtgcaacagcagcaacagcaacagcagcagcagcagcaacaattgctgagCATCAAACGTGAACCCGAAGACTTGAGCAAGGATCCCAAGAATGGCAATCTGGGCGCCGCAGCAAACGGTTCAGTCATAACGCAGAAGATATTGCGCGTGGATGCAGCTAGAACTGAAGCTgaggcaactgcaacttcaactgcaactgcaactgcaactgcaactgcattcGAAATTAGCGAtaaaacagctgctgcagcaacaacaacagcaacaacaagtgaaaCTGCAACTAGTCCCGCCAGCGCCACAACAGATCTAGAGATGTATGCTACAACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAACAGCACCGGCCCCAGCACACAGCAGAGCACACTGCAAGCCCAGAGTCCCAGTCCCGGGCCGTACATCACAACGGATAGCTATGGCATGTATACGGCCACACGACTGCCGCCCGGCCCACCGCCCGCAACCACATTCATAACGGAGCCCTATTACCGCGAATACTTTGCGCCCGATGGCCAGGGTGGCTATGTGCCCGCCGGCACAGCGCGCAGCCTCTACGGCGAGGATGTATCCGTGGCGGCGGCCACACAACCACAGCCCGTGGGCGGTGTCTATGAGGCGCGATTCACCAGCAATGggcccaccaccaccacagtGCTAACCAGCAGCAATGCACACCACcacagtcaacagcagcagcagcagcagcagcaacagcagcaacagcaacagcagcagcagcagcagcaacagcagcaacaacagcagcagcaggaacagtcGGGCAAAAGCGGCGGTACTCCACTGTATGCCAAGGCTATAACGGCGGCGGGTCTGACCGTCGATTTGCCCAGTCCCGATTCGGGCATTGGCACGGATGCCATTACGCCGCGGGATCAAAATCACATACAGCagTCCTTCGACTATACGGAACTTTGTCAGCCGGGCACCTTAATTGATGCGAATGGCAGCATACCCGTTTCGGTGAACAGCATCCAGCAGCGCACTGTGGTGCACGGCAGCCAGAATAGTCCAACCACATCGCTGGTGGACACAAGCACAAATGGGTCGACACGCTCGAGACCCTGGCACGATTTCGGACGCCAAAATGATGCtgataaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGTTATAATTTGGAGAGCCCGATCAGCTCGTCACAGCGTCGAGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATTACGCTGGAGTATGTGCACGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTGATGTTTCGCGAGGAGAAGAGTCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGCCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGTCTCGTTGGTTGCATTGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTCGAGAGCTCTGCCAAGGTAAGTGCTAAGTAA
Protein Sequence
MMQDATSSYAISYTDWIAESRRYTLEPAQQATPPPPPAPPQQQQHQQQHQQQPQLHHQQQLQPHPHPHPHHHLQAHHLSHHQHHHQHYASQSPPHYSYVPPPKDAAAQLQQHLPLTAAGLMQSVADEIQLSEQQSTPPPPPPPPPPPPPPPPTAHASNTTYAVYSYYRDVDVDVDVDAEQQQQLQHHHQQQQQHNARSQEDQQQLLWSNASSTGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAATTGVVSTTTISNQQHQQQQQQQQQQQHQQQQQQQQQQQHQQQQQQQQQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQQQQQLLSIKREPEDLSKDPKNGNLGAAANGSVITQKILRVDAARTEAEATATSTATATATATAFEISDKTAAAATTTATTSETATSPASATTDLEMYATTGGTQIYLQTSHQNSTGPSTQQSTLQAQSPSPGPYITTDSYGMYTATRLPPGPPPATTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVAAATQPQPVGGVYEARFTSNGPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEQSGKSGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKVSAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00541541; iTF_00588629;
90% Identity
-
80% Identity
-