Dgau014052.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila gaucha
Gene Symbol
-
Assembly
GCA_035045545.1
Location
JAWNOY010000366.1:2315806-2318617[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.011 0.77 10.5 1.7 2 23 143 165 142 165 0.90
2 12 7.7e-07 5.5e-05 23.5 1.9 2 23 179 201 178 201 0.96
3 12 0.37 26 5.6 8.8 2 23 455 476 455 476 0.97
4 12 1.2e-06 8.7e-05 22.9 2.8 1 23 482 505 482 505 0.96
5 12 0.00037 0.026 15.1 0.4 1 23 510 533 510 533 0.96
6 12 0.00015 0.011 16.3 4.6 1 23 551 573 551 573 0.96
7 12 0.00013 0.009 16.5 1.6 1 23 578 600 578 600 0.98
8 12 3.3e-05 0.0024 18.4 1.7 1 23 606 628 606 628 0.95
9 12 0.00033 0.023 15.2 0.7 1 23 634 656 634 656 0.98
10 12 3.4e-07 2.4e-05 24.6 2.7 3 23 664 684 663 684 0.99
11 12 7.6e-08 5.4e-06 26.7 1.7 1 23 690 712 690 712 0.99
12 12 1.5 1.1e+02 3.7 5.2 1 19 717 735 717 740 0.88

Sequence Information

Coding Sequence
ATGCCTGACACGTACGACCAATTCGATGCAGAGCGCGTCTGTCGCGTTTGCCTGCGCGAGGTGGGCGATTTCTACTTCATCTACGATGAGGCGCCCGTGGAGCAGGGCGCGAACATCGCCCAAATACTTAACGAGTGCACGCGCTACACCTGCGAGCGCTACGACAAGATGCCCCATCACATGTGCGACACCTGCATCAAGGCCGCCTGCCAAGCCTATCGCTTCAAACAAGACGCTGAGAAGGCCTATCGTTCGCTTGTGGCCATGGTGGGACGCACACCTGTGAACAAGCCGAATAGCAGCGATGTGTGCACCCAAACTGAGCAAGTGGTCATGTTGCCATGCGGGATCTGCAATGATAAATTTCTCAACATTCTAGAATTGCGTCTGCATCGCAATCGCCAACACATGAATACGGATGAGCTAAAATGCAGGCTCTGCGACGAGCAGTTCCAACAGCTCCGCCATCTGCGCAATCATCTCGTGGAGCAGCATGATCAAAAGTCGGCAACGCCGTTGCTAAGTCGGCGTCTGGAATGTCGAGTGTGTCAGCGTGCGTTCTCGCGACGCGATCATCTGATACGCCATATGCGAAAAGTCCACAATGTGTCCCGGCAGGACGAGATGGAATCTGAATCGGCCTGGCCGCCCAACGACGAGGCAACCATGCAAAGCGGCGACGAACTAGAGTCGGCTGCCGTCTTATTCAATGACCCAGCAGCATGCTCTGACAACGATAACAACGAGAGTGGCTATCAATGCCATACTACCAATCCTATATCAAGCAACGAGGAGTCTGCCGATGATGATGTACACGCCGAGGCTAAACAATCGCTCTGGCTGCACATTAAGCCCGAGCCAGAGCCGGAGCCGGAACTCGATCAAGTGAATCGCGAAAGAAGGCGCAGAAAGAAGACAATTTTAAAAGTCGCAGCTCACACGGATACGGAGGAGGAAAATGAATGCATTAGCAAGCAAAAGCCTGCGTCGAGTTCAATGGTAAAAGAGGTAAAAGAGGAGCCACTCCCCGCCGGCAACGAGCAACAATTGTGCATTAAGCAAGAGCGACTGCGCATTGATAGCATCAAAGTGGATGAGGAGTACGAGATAGAGACTGCAACAGCTGATCTATTTCACAGTGGTGACGAGGACGAAGACGGCGAGGACATTGAGAGTGACATTGATGAAGAGAACGATGAAGACGAAGATGAGGACGATGCGCATGCAGAGCTTGGTAAGCACAAGTCGAAACTGGCCCAAGTGGAAATCGTGCGGGAATATCTGCAAAAGCCGACAACTGGCAAGCAGCGACGCCGCCGACGCAAAAAGACTCAGAGCGAAACGGAAGTGAATCCAGAGAATCGTTGCGATGTCTGCATGCGTACCTTCTCCCGCCATTGCCATCTGTTGCGCCACAAATTGTCGCACCTGGAGAAGAAGCCTCATAGCTGTCCGCATTGCCCTAAGGCCTTTGCGCGCAGTGATCATCTAAAGGCGCACGTGCAGAGCCTGCACGGCAACAAGGAGCACAAGTGCGTGCTTTGCGATGCGGCTTTTGCCCGTCTCGATGCACTCGAACGCCACAAGATGAGCAAACACAATGGCGAGGGCCTCGACGCCAGCAGCGAGCTGAAGCTGCAAATGAGCGAGCATACGTGCGAGTACTGCGCCAAGCGTTTCTCCAGCAAGACATACCTGCGCAAGCATACGCTGCTCCACACGGAGTTCCTATACGCATGCAAGAGCTGCGATGAGACGTTCAAGGAGCGGCAACAGTTGCGCAGCCACGAGAAGACTCACACCGGCCAGCGTAATTTTCTCTGCTGCATTTGCGGCGACAGTTTCGCTCGCAACGACTATCTGCGCGTCCACATGCGACGGCATAATGGGGAGAAGCCATACAAGTGCCGTTACTGCATTAAGGCATTTCCACGCGCTACAGATCTCAAGGTACATGAGCGCTATCACACGGGCACCAAGCCCAATTTATGCAACACCTGCGGCAAAAGTTTCCATCGCGCCTACAATCTAACCATACACATGCGCACCCATACGGGCGAACGTCCTTATAAGTGTGATCAGTGCTCCAAGAGCTTTAGCCAGAGCAACGACCTGAAGGCCCACATACGACGGCACACTGGTGAGCGGTACAAGTGCCCGCATTGCGACGCCTACTTTCTGCAGCTCTATCATATGCGCAACCACTGCCTAAGTGCCCACAATAAGCATATTGAGACGAAGACGGGTCGGCTGCAGCGCACTGGCCTGCTGGACGAGCCCAATCATTCGCATCTGACCACGGTTGTAATGCCTCCTGCACGTTATCAGACATCAGCGCCCGATCCGCATGCTATAGCCACCGTTACCACGCAGTTGTCCACGCCCATTCTGCATTCACCGGTGACCTACAGCACAACGTCGCCAGTGCCTGTATCAGTGTCCGTTCCATTGCCGGATGCGGGAGGATTTGTGGGTGCAACGACAAatgcaacaactacaacagcaacggcaCCCTTTGGCACCTTCAGTATAGCACCCGTGGTGATGGCGCATCTGATGTACAACCATGGCGGGAACAGCCAGCAGAGCAACGCGAGCAAATAG
Protein Sequence
MPDTYDQFDAERVCRVCLREVGDFYFIYDEAPVEQGANIAQILNECTRYTCERYDKMPHHMCDTCIKAACQAYRFKQDAEKAYRSLVAMVGRTPVNKPNSSDVCTQTEQVVMLPCGICNDKFLNILELRLHRNRQHMNTDELKCRLCDEQFQQLRHLRNHLVEQHDQKSATPLLSRRLECRVCQRAFSRRDHLIRHMRKVHNVSRQDEMESESAWPPNDEATMQSGDELESAAVLFNDPAACSDNDNNESGYQCHTTNPISSNEESADDDVHAEAKQSLWLHIKPEPEPEPELDQVNRERRRRKKTILKVAAHTDTEEENECISKQKPASSSMVKEVKEEPLPAGNEQQLCIKQERLRIDSIKVDEEYEIETATADLFHSGDEDEDGEDIESDIDEENDEDEDEDDAHAELGKHKSKLAQVEIVREYLQKPTTGKQRRRRRKKTQSETEVNPENRCDVCMRTFSRHCHLLRHKLSHLEKKPHSCPHCPKAFARSDHLKAHVQSLHGNKEHKCVLCDAAFARLDALERHKMSKHNGEGLDASSELKLQMSEHTCEYCAKRFSSKTYLRKHTLLHTEFLYACKSCDETFKERQQLRSHEKTHTGQRNFLCCICGDSFARNDYLRVHMRRHNGEKPYKCRYCIKAFPRATDLKVHERYHTGTKPNLCNTCGKSFHRAYNLTIHMRTHTGERPYKCDQCSKSFSQSNDLKAHIRRHTGERYKCPHCDAYFLQLYHMRNHCLSAHNKHIETKTGRLQRTGLLDEPNHSHLTTVVMPPARYQTSAPDPHAIATVTTQLSTPILHSPVTYSTTSPVPVSVSVPLPDAGGFVGATTNATTTTATAPFGTFSIAPVVMAHLMYNHGGNSQQSNASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00532523;
90% Identity
-
80% Identity
-