Basic Information

Gene Symbol
-
Assembly
GCA_035045545.1
Location
JAWNOY010000342.1:4238362-4240769[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 8.1e-10 1.2e-06 28.6 0.0 1 41 237 278 237 283 0.91
2 4 1.7e-05 0.025 14.8 0.0 3 44 294 339 294 341 0.90
3 4 1.7e-06 0.0025 18.0 0.0 3 46 349 393 347 393 0.90
4 4 6.8e-08 0.0001 22.5 0.0 3 43 401 442 399 445 0.95

Sequence Information

Coding Sequence
ATGAGCGATGTGGATAACGTAAAGTTGAATcatcaacagctgctgcaggaaATAACATCGCTGCTGGCATCTAGCACCGAGCCAAGCGATGCAAACGCTTTGCAATTGAATCAAGAGTTGCAGCGGCGCTTGGAACAGGTGCGCAGACGTATATTAAAGCTGTTAGAGATAGTGCGCGCTCGTTACAAACGCAACGAGCAGACACTCGTACGTCGCCAGAAGCCCCGCTCTCACAGCGCCATAGCAGGCGGCGCTGAAAGTGTGGGTAAGAGCGGCGCAGTGCTGCGCGGCGGAACGTTTCGCTTTAAGGGCAACTTATATTTTCGCGATGCGGACGGACGCAGTTGTCCCAACAACGAGGACTATGAGAGACGGTGCAACACTGAAATGTTTCCGACCGATTTCGATATGCGCTCCAAGCACGTCTGGACGGTGCTGGATAAGAAGAACGTCGTCATGGGCATTAAGCAGCAGCTGCTGGATCATGCTAGCTACCAGGCAGCGGCAGTGAAAAAAGTGTCTAGCAGCAACGAGCGCAAACGCAAGGGCATTGATCTGCACGTACAAACGGTGGCCAGTTTGTTAGCTACCGCTGATAGGAATTTCAGTATTGATTGGCACCAGATTAGCACACTGGATCTCGAGCATCGCCACTCGTCCTACAGCTGCGAGGCTATGTGGCTGGTGTACTTGCAGCCGCAGCTGAAGCGCGACGACTGGACGGCCGAGGAGGATAAGGCATTGCTGGCCGCGGCCAAAGCCAACAAGCTGCAAAACTGGCAAGCCATTGCGAATGCAGTTCGTCAACGTTCTGACTATCAGTGCTTTGTGCGCATGCAGACAACGCTGCGCTTTCACCTGGAGCCGACGAGTGCTATCCGTTGGAGTCACGAGGACAATGAACGTTTGCGCACTGTTGTCTTGCGGAATACGGTTAACGGACTGACCAACTGGTCTCAGGTGGTCGAACATTTTCCGGGCCGATCACGATCCACATTAATTGGAcgctatatgtatgtgcttcATCCCAGCATCAGCCACGCTCCATTTACTCCTAGCGAGGATCTTATGCTGTTCGCTGCAGTTGAGGAGTACAGTGgcaaatttaattgctttcCACGCACGTTGTTTCCGAATCGTTCGCTGGCTCAGCTGCGTACCCGCTATAACAATGTGCTGGCACAGCGCAATAAAACCGATTCCTGGTCCATGGATGATGACACAAAGCTGATGACTTTCGTTACCGAGCACGGCACATCGCAGTGGGTGATGTGTGCCGATACTTTGGGCAATCACACACGAACTAGCTGTCGCACACGGTTTCTGGTCATCAAGCGTTTTCTTGAGCAGCATCCTCACGCCACGGTTGCTGATATACCACGTCGCAAGACCACCAAAAAGGCTCAAGTAACTGCTGAGAATTGGGCTCAGCGTTTGCAGGAATGGCAAGTGGATCCGGATTCTTTTATCGTCAAATCCACTAGTAAGCCGAAACCAAAGAAACCCAAACTTGAACTGGCCATCAACGGCAACTGTTTAGAGCCATTGCGCGGCATTGACTTGCAGATCTACGAGTATTTCAAGTGTTCCTATAATCTCAAACTGCATGCCCGGCCAGTGTCAGTACCGTTCCCACGCCACGATCGGAATCTCTATGTGGTGGCCAACGCGCTACGCTACAGGCCACCAGCCAATGTCCCATTGCTGGTCCAGAGCATTGCGTTCAGCAAGCAGCTGAATCGATGCTATAGCAAGATGCTGCGTCAATTGCCCGCGTTGGAGGCGTATGAATCAACTGCgatgccactgctgctgccgcctaACTGGTCTACAATGATGGGCTTTCGTGCCATATGCATCTTGTCAGTACATTGTCGCAATCATGCAAAGATTGCGAATGAATTGAAGCCGGCCACCAGCTATGATGAATCGCAGCCAGCGGTGCAGCTGTTCCGGCAACGTTTACGCACTCTATTCTATACCACCACGCTGCTGAGTCGGTTGGAGCCGCCTGCGTTCGAGCAGCTGCCAGCGGCTTTAACGGCTCTGCCGCGTCCAGCTATAAACtttggtataaaaaagaagtcCGAGCCGCCGTCGACATCCgcaaagaagcagcagcaacaacagaagaGGCACGCATTACCCAGAACTTTGGGTGGAATAAGCGCTCAAGACATAGCCCGCCGACAAATGGAAAAATTGGATTGCCTGACACAGTCGGGCGACCGTTTTAAATCCGAGTTTAAGGATGAGCCGAATGTTAAGCAGGAGGTCTCTTACGAATAG
Protein Sequence
MSDVDNVKLNHQQLLQEITSLLASSTEPSDANALQLNQELQRRLEQVRRRILKLLEIVRARYKRNEQTLVRRQKPRSHSAIAGGAESVGKSGAVLRGGTFRFKGNLYFRDADGRSCPNNEDYERRCNTEMFPTDFDMRSKHVWTVLDKKNVVMGIKQQLLDHASYQAAAVKKVSSSNERKRKGIDLHVQTVASLLATADRNFSIDWHQISTLDLEHRHSSYSCEAMWLVYLQPQLKRDDWTAEEDKALLAAAKANKLQNWQAIANAVRQRSDYQCFVRMQTTLRFHLEPTSAIRWSHEDNERLRTVVLRNTVNGLTNWSQVVEHFPGRSRSTLIGRYMYVLHPSISHAPFTPSEDLMLFAAVEEYSGKFNCFPRTLFPNRSLAQLRTRYNNVLAQRNKTDSWSMDDDTKLMTFVTEHGTSQWVMCADTLGNHTRTSCRTRFLVIKRFLEQHPHATVADIPRRKTTKKAQVTAENWAQRLQEWQVDPDSFIVKSTSKPKPKKPKLELAINGNCLEPLRGIDLQIYEYFKCSYNLKLHARPVSVPFPRHDRNLYVVANALRYRPPANVPLLVQSIAFSKQLNRCYSKMLRQLPALEAYESTAMPLLLPPNWSTMMGFRAICILSVHCRNHAKIANELKPATSYDESQPAVQLFRQRLRTLFYTTTLLSRLEPPAFEQLPAALTALPRPAINFGIKKKSEPPSTSAKKQQQQQKRHALPRTLGGISAQDIARRQMEKLDCLTQSGDRFKSEFKDEPNVKQEVSYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476550;
90% Identity
-
80% Identity
-