Basic Information

Gene Symbol
Ubp1
Assembly
GCA_035045545.1
Location
JAWNOY010000300.1:5203-21999[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 3 1.9e+04 -5.9 4.1 89 89 72 72 26 125 0.51
2 4 1.7e-52 1.1e-48 165.5 0.1 22 188 396 559 376 568 0.90
3 4 0.47 3e+03 -2.7 0.1 12 27 568 583 557 605 0.49
4 4 3.3e-13 2.2e-09 37.1 0.7 188 222 641 675 634 676 0.91

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTATCGCAAAGTTCCGGCCTGTTGGATTTACAAAGCATATTTGATCCACAATATtcattacaacaacaacaagagctacatcagcagcagcagcaaattcaTTTACCatcagaacaacaacaacaacaacaacaacgcgcaTCAAcgaaatttgatttaagcaTTTTCAACGATTTCGACCAAATGgaattcaacaacaacaatttgaatCGAAACCATAATCAGTATCagaataatattaacaataacagtaataataacaataataataataacaacatcaacaataataacaacaaccacaataccaataacaacaacagcagcaacaacaacaacattcatACGCACCAAACTAACGGAGAAAATCTAAGTCAGATCCAAAATAGTCATTTCATCAGCGGctatcatcatcagcatattGGATCGGATTATGAGCCAGTGATTAACTTTGTTGACTCACCACCGAATTCTGAGGAATCTTGGACAGACGGACAGTCCAAGGATTCACCAGGACCCCAAATTATCGACGTGAGGACAATTTACTCAGATAGTGGTTCGCGCAAAAGACGAATGGATTGGTACTCATTGGACATCGGTCAAAGTGAAAATTCACCGACAACTCAATCAGGCGAAATACCCAATAAGGTGGCACATCAGGAGAAAGATAAACACAAACGTGAAAAGCATTCaggtcgcagcagctggagcGACGATATAGGTTTTGATCTGAACGCTGAGTTTAATAGCAACTCATATTTGAACAATGAAAACTTTTTATCGTTCTCCCCGAGCCTGACGGCACTTAAACAGGAGCCGCAAACGGAGCAGCTCAAACCGAACGCAAAGTTATCCTTGGACAGCTCTGGAATTGGCAAAAGCGATAAGTCGCCATTGGGCGAGGCAAATCATTCACCACAGCGCACGGGTcaggaggcagcagcagctggaggcaAGCATGAGTTGAACCCAGGCAACATTTGTGGCTGTGGCTCGCCACAAGGCTCGCCCGCCGCAGCGGATTTTGAATTAAATGCGAACGAATCGTCGGCAGAGAAACCCCGAGCTGCATCTGGCAATGAGGCCTATGCACAGGCGCCGCGCTCtggactgcagcagcagctgagcgtTGCTGAGGCGGCCAAAATTGAGCCCAGCTCTTCCGGCGGTGCATCTCATGCAGAGGATCATAAATTTCAGTACATTTTGGCAGCGGCCACGTCAATAGCGACAAAGAACAATGAGGAGACATTGACCTATCTGAATCAGGGTCAAAGCTATGAGAtcaaattgaagaaaattgGTGATTTATCTTTCTATCGTGATAAGATTTTGAAGagcGTTATCAAAATCTGTTTCCACGAGCGTCGTTTGCAGTTTATGGAACGCGAACAGATGCAACAATGGCAGGCATCGCGTCCAGGTGATCGAATCATTGAGGTAGATGTCCCGCTGTCGTATGGCCTGTGTCATGTGTCGCAGCCATTGAATGCGAACGCCTTGAATACTGTCGAAATATTTTGGGATCCATTGAAGGAGGTCGGTGTTTACATCAAGGTCAATTGCATTTCAACCGAATTTACACCAAAGAAGCACGGTGGTGAAAAGGGTGTACCATTTCGACTACAAATTGAAACctatatagaaaatacaacAGCTAattgtggcaacaacaacaacagcagctcgagcagcagcagcaacagtagctctagcagcagcagctccagcagcaacaacagcaacaacaacgctgccactggcaacaacaacaacaacaacaagacaaGCAATAcaactagcaacaacaacaacaacagcgcatCAGGCGTTACATCGGCGGGGCAGACGGACAATCGGAATGCAAACAGTGGCTCCATCGCCGGCCTGGCGACCCTCAATGGCAAACAGGCGGTGCACGCAGCAGCCTGTCAGATAAAGGTCTTCAAGCTAAAAGGCGCCGATCGCAAGCATAAACAGGATCGCGAAAAGATCCAAAAGCGTCCGCAATCAGAGCAGGAGAAGTTTCAGCCCAGCTACGAGTGCACCATTATGAATGATATATCATTGGATCTGATAACGCCAGCGACCATAACTGGTTGCTACAGTCCCGAATATATGAAATTGTGGCCAAATTCGCCGGTGCATATACCAAAATATGATGGAATGTTGCCATTTACCAGCAGCGCATCACCGGcggccagcagcagccccaTTGCGATCAATTCGGTGACATCCACAAATTCGCCAACATTGAAACTAATGGATGCCACAAATATGGTGTCGCCGCAGCATGTGCCAGCGGATATGGATGATTATaatcaGAATATAATGCCAGAATCAACGCCCGCACAAGTCACACAATGGCTGACACATCATCGTCTGACGGCCTACCTCAACACCTTCGCCCATTTCTCGGGCGCTGATATTATGCGcATGTCCAAGGAGGATCTAATACAAATCTGTGGACTTGCCGACGGCATACGCATGTTTAATATATTGCGCGCCAAATCCATTGCGCCTCGTCTGACGCTCTATGCCAGCATGGATGGCTGCAGCTACAATGCCATCTACTTACTCTCTAACACGGCCAAGGAGTTGCAGCAGAAGATCTACAAGTTGCCTGGCTTCTATGAGTTTATGGCCAAGAGCGGCTCTGCTGGCCTCTTGGAGAATGGCAGCAatatggcagctgctgcagcagcggcggccactgctgctgctctctacAACAGTTGGGGCATGAACTCAAAATATTCCGGCAGCGGCTCAAACATATTCAACGAGGTGAACAAGAGTTCCGTCTACATATCGGGGCCGTCGGGCATACATGTCAGCGTTAGCGATGAGGTGCTCAACAATGAGGTGAAGGACGGCAGTCTCTATGCCCTGGATGTGCAGGGTGGCAAAGTTATATTGAAGCTGATCAATAAGCAGGATAGCAATTGA
Protein Sequence
MALSFLSQSSGLLDLQSIFDPQYSLQQQQELHQQQQQIHLPSEQQQQQQQRASTKFDLSIFNDFDQMEFNNNNLNRNHNQYQNNINNNSNNNNNNNNNINNNNNNHNTNNNNSSNNNNIHTHQTNGENLSQIQNSHFISGYHHQHIGSDYEPVINFVDSPPNSEESWTDGQSKDSPGPQIIDVRTIYSDSGSRKRRMDWYSLDIGQSENSPTTQSGEIPNKVAHQEKDKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPSLTALKQEPQTEQLKPNAKLSLDSSGIGKSDKSPLGEANHSPQRTGQEAAAAGGKHELNPGNICGCGSPQGSPAAADFELNANESSAEKPRAASGNEAYAQAPRSGLQQQLSVAEAAKIEPSSSGGASHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLNANALNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTTANCGNNNNSSSSSSSNSSSSSSSSSSNNSNNNAATGNNNNNNKTSNTTSNNNNNSASGVTSAGQTDNRNANSGSIAGLATLNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQEKFQPSYECTIMNDISLDLITPATITGCYSPEYMKLWPNSPVHIPKYDGMLPFTSSASPAASSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDDYNQNIMPESTPAQVTQWLTHHRLTAYLNTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKSIAPRLTLYASMDGCSYNAIYLLSNTAKELQQKIYKLPGFYEFMAKSGSAGLLENGSNMAAAAAAAATAAALYNSWGMNSKYSGSGSNIFNEVNKSSVYISGPSGIHVSVSDEVLNNEVKDGSLYALDVQGGKVILKLINKQDSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00573080;
90% Identity
-
80% Identity
-