Basic Information

Gene Symbol
Gata6
Assembly
GCA_018153365.1
Location
JAECXW010000393.1:8027247-8031580[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.12 4.4e+02 0.6 1.4 1 26 362 381 362 388 0.63
2 2 1.6e-17 5.7e-14 51.4 6.9 1 34 413 445 413 447 0.97

Sequence Information

Coding Sequence
ATGAGTGAGCTGAACGAAGCCCGTGAGGGAGAGCCGAGCACAAACGCCAGCAACGCGAGCTCGGGATCCGCTCCGGATAGCCACATCGAGTACCAGCGCAGTGCGCACCACTCGCCCGGAGCCACCCACTACGTCCAGATGGCGCCACGTAATGCGGAGGTGCCGGAGCAGGTGGGAAACGCCGCCGGAGCTCCACCCGGTGCCATATTCGCCTATCCCTCCGGGCAGATCATTTGCAGCGGCGACGATGTGGCGGCCATTAAGATCGAGACCATCGAGAAGGGCGAGGCGGCGGGGGAGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCACCGTGCGCTTCGTGACGGAGGACGGACGCTTCACCACCGCCGGACCGGAAACGTCCGCCTCTAATCTGTACTACGATGCCCCCGTGGTGGATGGCAGTGTGCACGCCAACGAGTCCAAGACGTACGCCGATCTGGGCAACGCCTACACCCCGTTCGCCCCCAGCTCCAGCTTCAGTAGCAACAGCTATGCGGCCACTCTGCAGCAGGGCAACACCATCTACAGTGTCCCGGGCACCGGGCAGTTCCTGGCCAAGTCCGAGTCCGGCCTCAACCAGCTGCGCCAGGCCGGACCGGCCACCTTCCAGGCGATATCCTTCAACGACAGCGGCAACACCATCGAGGCCCTGTGGACCTCACCCGCTCCGCCGGAGTTCCAGAATGTGCCCTACGGCAGCTTCCACCCGCAGGTAATTGATGAGTACGCCACCGGCAACATGACCACCACCCACTGGTCGCCCGCCGGGAGTATCGGTCAGTACGATGGGAGCCTGGTAGCGACCTCGTCCACCTCGTCGCCCAACCACGAGCTCAAGTGCGAGAACTGCCACTCGTCGTTGATGCGCAAGGGCGCCGAGTACTTCTGCTCCAACTGCCCGGCCTTCATGCGGATGGCGCCGCGCATGCCCCAGCGGCAGGCGAAGCCCAAGGCCGCCGCCGCCCCCAACAACCGGCGCAACGGAGTCACCTGCGCCAACTGCCAGACCAACTCGACCACGCTGTGGCGCCGCAACAACGAGGGGAATCCGGTGTGCAACGCCTGCGGGCTGTACTTCAAGCTGCACAACATGAACCGCCCACTCTCGATGAAGAAGGAGGGCATCCAGAAGCGCAAACGGAAGCCAAAGAACAACGGAGGAGCTCCCATGCACCGGGCACCGCTGCCAAGCATGTCGCAAGGAGTCAACCTGATGGCGAATAGTCCGCTTTATCCATCCCAAGTGCCGGTGAGCATGCTGAATAGCCAGCAGAACGCCAGTCCGGAGCTGCACGACATGTCGACGACGGGTCCGGCGGGTGGTCCCCGGGTGGTGGCCATCTCCCTCAACTCCTCGGCCCCGCCCACCGCCGACGGAACGCTCAACATGTCCGCTCGTCACCATGTGACGGGAGAGAGCCACTCGCCCTACAGTCAGCACTCGACGTCGACGCCCCAAAGCCAGTCGCCGCATCTGCCCAGCACAGTGGCGATAAACCGCCAGATAGTCCAGCCAGTACCCACAATCGAAAGCGGTCGCAGTTCCAATAACGAGCTGACCCCCAGCGTAATCACGCGCACTGGACTCCCAGAGCGATCATCGAATAACTAA
Protein Sequence
MSELNEAREGEPSTNASNASSGSAPDSHIEYQRSAHHSPGATHYVQMAPRNAEVPEQVGNAAGAPPGAIFAYPSGQIICSGDDVAAIKIETIEKGEAAGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVRFVTEDGRFTTAGPETSASNLYYDAPVVDGSVHANESKTYADLGNAYTPFAPSSSFSSNSYAATLQQGNTIYSVPGTGQFLAKSESGLNQLRQAGPATFQAISFNDSGNTIEALWTSPAPPEFQNVPYGSFHPQVIDEYATGNMTTTHWSPAGSIGQYDGSLVATSSTSSPNHELKCENCHSSLMRKGAEYFCSNCPAFMRMAPRMPQRQAKPKAAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGGAPMHRAPLPSMSQGVNLMANSPLYPSQVPVSMLNSQQNASPELHDMSTTGPAGGPRVVAISLNSSAPPTADGTLNMSARHHVTGESHSPYSQHSTSTPQSQSPHLPSTVAINRQIVQPVPTIESGRSSNNELTPSVITRTGLPERSSNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00608103;
80% Identity
-