Basic Information

Insect: Drosophila fuyamai
Gene Symbol: -
Assembly: GCA_018153365.1
Location: JAECXW010000878.1:8364198-8366075[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 3.9e-05 0.003 17.9 1.8 1 23 238 261 238 261 0.97

2 8 1.6e-06 0.00012 22.3 1.3 2 23 272 293 271 293 0.97

3 8 0.0017 0.14 12.7 0.4 1 23 302 325 302 325 0.93

4 8 0.081 6.3 7.5 0.1 3 23 335 355 333 355 0.96

5 8 0.00031 0.024 15.1 6.4 1 23 361 383 361 383 0.98

6 8 7.8e-05 0.0061 17.0 0.2 1 23 388 410 388 410 0.98

7 8 1.6e-06 0.00012 22.3 1.7 1 23 416 438 416 438 0.97

8 8 0.018 1.4 9.6 4.7 1 23 444 467 444 467 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	3.9e-05	0.003	17.9	1.8	1	23	238	261	238	261	0.97
2	8	1.6e-06	0.00012	22.3	1.3	2	23	272	293	271	293	0.97
3	8	0.0017	0.14	12.7	0.4	1	23	302	325	302	325	0.93
4	8	0.081	6.3	7.5	0.1	3	23	335	355	333	355	0.96
5	8	0.00031	0.024	15.1	6.4	1	23	361	383	361	383	0.98
6	8	7.8e-05	0.0061	17.0	0.2	1	23	388	410	388	410	0.98
7	8	1.6e-06	0.00012	22.3	1.7	1	23	416	438	416	438	0.97
8	8	0.018	1.4	9.6	4.7	1	23	444	467	444	467	0.97

Sequence Information

Coding Sequence: ATGGCCACCGCCCAATTGGAGCATGCTCCACCCGCTGATCCACATCCCCGGCGTAATCCCAGCGAATGGCTGCAGTGGTGTCGCCTGTGCGCCAAGGACGACTTGGAGGGCAACATGAATGTGTTCCTCAAGAACGAGGACTCCGGCGAGGCATTCTCATTGGAGCTGGCCACCGCCATTGGCAAGTACTTCTGGGTGAATATAACACGGGGTGAGGAACTGCCGGAGATGATTTGCAATGAGTGCCTGTCGCTGGTCACATCGCTGGTGAATTTCTCGGAGCGGATTACCCGGGTGCAGAAGCTTTACTGCATCCTGCAGAGCTCGTCTGGCCAGGAGCCCGTAAATCTCCAGGAGCTGCGCTCAAAATTCGGGTTAATGGACGAAGAGACTCTGACAGAGGTCCACTATGTCGATAAGAAGCCAAAAATGGGTGAAGAGGTACAATTTCTGCCAGAGGAGTCGGCTTATGAGTTGGAAAACCCATTAACTCCGGAAGGAAAACAGGAACTGGACCAGCCGGATGAGGAGCTGGAGCAGGAAGAGCCGGATGACCAGGACCCAGACTACGATGCCGACGAAGACGCCGTGCTGCTGAAGCTATGCGATGCCTATGGAATCCAGGACGACCAGTCTTCCAGTGACAGTTTGAGTGACTCCTCGCCAAGGCAAGAAAAACCTGGGAAAGGAGCACTCGATTCCGACAAAAGACATCAGTGTAACGAGTGTTTGCGAAGCTATGCCACCGCTAGGACCCTGCAACGTCACCTGCGGCAGGATCATGGCAAGATTGAACAGTCATCCGATCAGCTGCAATGCCCCGATTGCCCCAAAAAGTTCCGGCTTCACTACCAGCTGGAGCGGCACATCAAATGGCACGTGCCCTTGCCCAAGCGAAAGCAATATGCTTGCAGCAGTTGCGACAAGAAGTTCGCCACCAGTGCGTCCGCCCAGCAGCACGAACAGTACATGCACCTGGATGAGCGACCGAGACCCGTGATCTGCGAGCAGTGCGGCGTGGGCGTCCATTCGATGAGTGCTCTCAAGGAGCATGTCCTAAAGCACACAGACTATGCCCCCTTTGAGTGCGAGGTGTGCAAGAAGTGCTTCAAGTCGGCAAATCGATTGAAACACCACAAGGAGACGCACGATCCACACAAGTACATTTGCCCGGAGTGCGGCATGCAGCTCAACTCGCGAACCACTCTTAATCGCCATCGGTTGGTGCACACGGATCAGATGCAGCATAAGTGCGACTACTGCGGCCGGGAGTTTAAGAGGGCCAAGGCCCTGAAGAATCACCTCATCCTGCACACTGGCTTAAAGCCATACTCCTGTGACTTTTGCGATCGTACTTTTGCCAATGGCTCCAATTGTCGCACGCACAAAAAGAAGTCGCATCCCGAAGAGCTGGCTGCCCAGGAGGCTGCGGGAGGTGGGAAGTCCCATAACCGAAATATACCCAAGCTGGAGGCCCTCAAGGCGTTCACCAAGAACAAGGACAACCTTTCACCGGTGGCCACCAAACAGAGCGGCTGTTTCGCTTTCGGAAAAAAGCCCAAGCCATCCATGAAAGATACTGCCAGTCTCACGCCTGCTTCGAATCTCACTCCCACTCAAGACACCCAGCCTGATCCAGCGCCTGATCCCGGAGGGGAAAACATAGCCCAGCCCAATCCTCCAGCTACGGCCATACCCACGATAGACAATATATACAACCACATTATGATTGACTACCGCTGA
Protein Sequence: MATAQLEHAPPADPHPRRNPSEWLQWCRLCAKDDLEGNMNVFLKNEDSGEAFSLELATAIGKYFWVNITRGEELPEMICNECLSLVTSLVNFSERITRVQKLYCILQSSSGQEPVNLQELRSKFGLMDEETLTEVHYVDKKPKMGEEVQFLPEESAYELENPLTPEGKQELDQPDEELEQEEPDDQDPDYDADEDAVLLKLCDAYGIQDDQSSSDSLSDSSPRQEKPGKGALDSDKRHQCNECLRSYATARTLQRHLRQDHGKIEQSSDQLQCPDCPKKFRLHYQLERHIKWHVPLPKRKQYACSSCDKKFATSASAQQHEQYMHLDERPRPVICEQCGVGVHSMSALKEHVLKHTDYAPFECEVCKKCFKSANRLKHHKETHDPHKYICPECGMQLNSRTTLNRHRLVHTDQMQHKCDYCGREFKRAKALKNHLILHTGLKPYSCDFCDRTFANGSNCRTHKKKSHPEELAAQEAAGGGKSHNRNIPKLEALKAFTKNKDNLSPVATKQSGCFAFGKKPKPSMKDTASLTPASNLTPTQDTQPDPAPDPGGENIAQPNPPATAIPTIDNIYNHIMIDYR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00578738;
90% Identity: iTF_00529753;
80% Identity: -