Basic Information

Insect: Drosophila fuyamai
Gene Symbol: -
Assembly: GCA_018153365.1
Location: JAECXW010000878.1:18566563-18570246[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0066 0.51 10.9 0.3 2 23 23 44 22 44 0.96

2 13 0.0039 0.3 11.6 4.4 1 23 50 73 50 73 0.94

3 13 0.0089 0.69 10.5 1.4 1 19 87 105 87 108 0.93

4 13 0.0085 0.66 10.6 4.1 2 22 124 144 123 144 0.91

5 13 0.29 23 5.7 2.0 2 23 390 412 389 412 0.94

6 13 0.012 0.92 10.1 0.3 1 23 437 459 437 459 0.97

7 13 0.0048 0.37 11.3 1.6 1 23 467 491 467 491 0.95

8 13 0.11 8.2 7.1 2.4 2 23 496 518 495 518 0.95

9 13 0.00027 0.021 15.3 0.2 2 21 531 550 530 551 0.93

10 13 0.008 0.62 10.6 0.4 3 23 561 581 559 581 0.97

11 13 8.1e-07 6.3e-05 23.2 2.8 1 23 587 610 587 610 0.98

12 13 3.2e-05 0.0025 18.2 1.4 1 23 616 638 616 638 0.98

13 13 0.0003 0.023 15.1 2.9 1 23 644 666 644 666 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0066	0.51	10.9	0.3	2	23	23	44	22	44	0.96
2	13	0.0039	0.3	11.6	4.4	1	23	50	73	50	73	0.94
3	13	0.0089	0.69	10.5	1.4	1	19	87	105	87	108	0.93
4	13	0.0085	0.66	10.6	4.1	2	22	124	144	123	144	0.91
5	13	0.29	23	5.7	2.0	2	23	390	412	389	412	0.94
6	13	0.012	0.92	10.1	0.3	1	23	437	459	437	459	0.97
7	13	0.0048	0.37	11.3	1.6	1	23	467	491	467	491	0.95
8	13	0.11	8.2	7.1	2.4	2	23	496	518	495	518	0.95
9	13	0.00027	0.021	15.3	0.2	2	21	531	550	530	551	0.93
10	13	0.008	0.62	10.6	0.4	3	23	561	581	559	581	0.97
11	13	8.1e-07	6.3e-05	23.2	2.8	1	23	587	610	587	610	0.98
12	13	3.2e-05	0.0025	18.2	1.4	1	23	616	638	616	638	0.98
13	13	0.0003	0.023	15.1	2.9	1	23	644	666	644	666	0.95

Sequence Information

Coding Sequence: ATGGCTGCCGAGTCGATGGCCCCCAAACTTCTGGTGGAGATCACCACGGACGGGGTGCCCAAGCTGCACTGCCCGGTGTGCAACAAGGCTCTGGTCTCCCTGGCCGGATATGTGAAGCACGTAAAGAAGCACCAGCCGCCGGGCGGCTTCGAGTGCCGTCACTGCGATGCTCGGTTTTGCCACGAGGAGGAGCTGACCCAGCACGCCAAGGATGAGCACGGAGTCACCGGACCGGCGGCTGGACAGGAACGCAAGCCCTTTGTTTGCGAGAAGTGCGGGGCGGAGTACAAGTACCAGGAGGCATATCGGCGCCATTGTAGAACCAAGTGTGGCGAGGAAAAACCGTCAAGGGAGGAGTCCCGACCCATGGAGTGCAAGTGCTGCTTCACCCGCTTTTCCAGCAGCTCCAATCTGACCAAGCACCGACGCAGTCGTCTTGACACTTGTGGCCAGCCGGAGTACGATTCGCCCGGCAGATCGGATCAGAAGAAGCGAAAGTCGTTCCGCAAGGGCAGAAACAGGGGCTCCGATGATGAGACCACCACCGAGGAGTCGGATAGCGACGATGACATTCCTCTGGCCAGCCGGCTGAAGACGAAGCTCAAGCAGGAGAGCCAGAACTCGGACTCGGGCGACGAGTGTCCCGACTTTGAGCCAAACAACAGTGATGACGATGCAGATGCATCCGGATTCCAGCTGCCTCCGCCGGCCATGGTCAAGGTAGAGGCCTTCGATGAGGAGGATTTCGAGTACCAGGACGCCAGCATGTATGTGAAGACCGAGAGCACTGATATCTTTAGCAACGAAAAGGATAAGCTTCTGGATGTGCTGCTCAACGAGGGCGATGGTCTGAAGCCCTTCGAGAGCTTAAAGGTGGAACAAGGAGCTGGCATACTGGACGAGATTGCTGCTGTACCGCTGGTGGAGGTGGCCGAGGAAGATGTCCTGGCTTTAAGGGGTCATAACAAGGAGAAGACTGGGGTAAGAAAACGTGGCAGGCCGCCCAAGGAGAAGATACCTGTGGTCAAGAGAAAGTATCGCAAGCGAAACGCACCGAGATCGCCCTCGCCTGAGGATTCATCGGGTACACCAAAACGCGTAGCTAAGATTAGCAAAAAGGAGCTAAAAGAGCGCCTCAAAATGATCAACAAGATGGAGAAGTCCTGGAAGTGTCCGCACTGCGTTAAAATCTATCACATCCGCAAGCCTTACGAAAAGCATTTGCGCGATGACCACAAGCTAAACGAGCAGGAGATGAAGGAGATCTTCAAGGATGTGGACGTGCATGCCAAGCTGGACGAAGAGGTCTTCAAGTGCCCCATATGCAGCAAAATCTACTTGGTGGAGAAGCGCTTGGTCACCCACATGAAGGTGCACGGAGAAGACGGCAAGCTGACGTTCAAGTGTCCCTGTTACTGCAACCTGTTCTTCGCCACCAAGGAACAGGCCACGGAGCACGCCCGGGCCCAGCACAAAGAGCTTCTCTACTGTGAGAAGTGCGACAAGTACATGACCGGCCACGACAGCCTCAAGAACCACGAACGTAACTTCCACTCGAAGAAGGAACCGCGCAGTCAGCAGCGCAATTTGATCTGCGACAAGTGCGGCAAAAAGTTCACCGGACGCACATCGCTCTCAGATCACGTGCGCTCCGACTGTGGCCGCCTGCCACTCTACGGCTGCAGCGTTTGCGGCAAGCATTTGTCCACAGCTGGTATTCTCAAGACGCACATGCTCCTTCACAAGGCAGACACGCCGTACCAATGCGACAAGTGTGGCAAGACATTCAAGGTGAAGGCGCAATACAAGTCGCACTTGAAGACGCGGCACACCGACTACAAGCCGTACAAGTGCCACCTGTGCCCTAAGGAGTATCCATACAGGGAGAGCTTGCTCACCCACATGACCGTGCACACGGGCATCAAGCGGTTCCTGTGCAACAACTGCGGCAAGCGCTTCACTTGCATCTCCAACTTGCAGGCTCATCGCAAGGTGCACGCTGACACCTGTGGCCAGTTGCCTTTGAATGCTAAGGCCACCCAGTACATGGGCGTTCAGCGAGGAAAACTCCTGATGGGCGCCAAACCAGAGGCGGGCATGGAGTACGAGGAGACCAAGACCCTGATCGCCCAGGATGTCATCGACAGGGACATGCCCATGGCTCAGGAGCTAAACTTCCCATCCGACGGCTCGGCGCCACTGGCCACCGTGCCCCTGAACTACGCCTCCACGCACCTGGTGCCCCACATCGTACTCCAGACCATGCAAGCCGAGGCCCGGCGACTGGAGTAA
Protein Sequence: MAAESMAPKLLVEITTDGVPKLHCPVCNKALVSLAGYVKHVKKHQPPGGFECRHCDARFCHEEELTQHAKDEHGVTGPAAGQERKPFVCEKCGAEYKYQEAYRRHCRTKCGEEKPSREESRPMECKCCFTRFSSSSNLTKHRRSRLDTCGQPEYDSPGRSDQKKRKSFRKGRNRGSDDETTTEESDSDDDIPLASRLKTKLKQESQNSDSGDECPDFEPNNSDDDADASGFQLPPPAMVKVEAFDEEDFEYQDASMYVKTESTDIFSNEKDKLLDVLLNEGDGLKPFESLKVEQGAGILDEIAAVPLVEVAEEDVLALRGHNKEKTGVRKRGRPPKEKIPVVKRKYRKRNAPRSPSPEDSSGTPKRVAKISKKELKERLKMINKMEKSWKCPHCVKIYHIRKPYEKHLRDDHKLNEQEMKEIFKDVDVHAKLDEEVFKCPICSKIYLVEKRLVTHMKVHGEDGKLTFKCPCYCNLFFATKEQATEHARAQHKELLYCEKCDKYMTGHDSLKNHERNFHSKKEPRSQQRNLICDKCGKKFTGRTSLSDHVRSDCGRLPLYGCSVCGKHLSTAGILKTHMLLHKADTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPYKCHLCPKEYPYRESLLTHMTVHTGIKRFLCNNCGKRFTCISNLQAHRKVHADTCGQLPLNAKATQYMGVQRGKLLMGAKPEAGMEYEETKTLIAQDVIDRDMPMAQELNFPSDGSAPLATVPLNYASTHLVPHIVLQTMQAEARRLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00615081;
90% Identity: iTF_00606536;
80% Identity: -